RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 PHIPQ8WWQ0 1821 aa22.78■■□□□ 1.24
DDR1-245ENST00000484556 HMX1Q9NP08 348 aaPredicted RBP22.78■■□□□ 1.24
DDR1-245ENST00000484556 MAST3O60307 1309 aa22.78■■□□□ 1.24
DDR1-245ENST00000484556 MYH13Q9UKX3 1938 aa22.77■■□□□ 1.24
DDR1-245ENST00000484556 HHIPL2Q6UWX4 724 aa22.77■■□□□ 1.24
DDR1-245ENST00000484556 MRIQ9BWK5 157 aa22.77■■□□□ 1.24
DDR1-245ENST00000484556 COL9A1P20849 921 aa22.76■■□□□ 1.23
DDR1-245ENST00000484556 ZNF697Q5TEC3 545 aa22.76■■□□□ 1.23
DDR1-245ENST00000484556 SCYL3Q8IZE3 742 aa22.76■■□□□ 1.23
DDR1-245ENST00000484556 OGDHLQ9ULD0 1010 aa22.76■■□□□ 1.23
DDR1-245ENST00000484556 SLC45A1Q9Y2W3 748 aa22.76■■□□□ 1.23
DDR1-245ENST00000484556 DOCK1Q14185 1865 aa22.76■■□□□ 1.23
DDR1-245ENST00000484556 PLXNB2O15031 1838 aa22.75■■□□□ 1.23
DDR1-245ENST00000484556 F6X3S4 739 aa22.75■■□□□ 1.23
DDR1-245ENST00000484556 CDC42EP5Q6NZY7 148 aa22.75■■□□□ 1.23
DDR1-245ENST00000484556 MAFAQ8NHW3 353 aaPredicted RBP22.75■■□□□ 1.23
DDR1-245ENST00000484556 CDX2Q99626 313 aaPredicted RBP22.75■■□□□ 1.23
DDR1-245ENST00000484556 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.75■■□□□ 1.23
DDR1-245ENST00000484556 RAPGEFL1Q9UHV5 662 aa22.75■■□□□ 1.23
DDR1-245ENST00000484556 AFG3L2Q9Y4W6 797 aa22.75■■□□□ 1.23
DDR1-245ENST00000484556 PTPRAP18433 802 aa22.74■■□□□ 1.23
DDR1-245ENST00000484556 CAVIN4Q5BKX8 364 aa22.74■■□□□ 1.23
DDR1-245ENST00000484556 ZFPM1Q8IX07 1006 aa22.74■■□□□ 1.23
DDR1-245ENST00000484556 PICK1Q9NRD5 415 aa22.74■■□□□ 1.23
DDR1-245ENST00000484556 FAM198AQ9UFP1 575 aa22.74■■□□□ 1.23
DDR1-245ENST00000484556 TRIM75PA6NK02 468 aa22.73■■□□□ 1.23
DDR1-245ENST00000484556 FAM110CQ1W6H9 321 aa22.73■■□□□ 1.23
DDR1-245ENST00000484556 LRRC26Q2I0M4 334 aa22.73■■□□□ 1.23
DDR1-245ENST00000484556 CCDC84Q86UT8 332 aaPredicted RBP22.73■■□□□ 1.23
DDR1-245ENST00000484556 DAGLAQ9Y4D2 1042 aa22.73■■□□□ 1.23
DDR1-245ENST00000484556 ATRNL1Q5VV63 1379 aa22.73■■□□□ 1.23
DDR1-245ENST00000484556 CDH23Q9H251 3354 aa22.72■■□□□ 1.23
DDR1-245ENST00000484556 PHF20L1A8MW92 1017 aa22.72■■□□□ 1.23
DDR1-245ENST00000484556 GRM8O00222 908 aa22.72■■□□□ 1.23
DDR1-245ENST00000484556 SLURP2P0DP57 97 aa22.72■■□□□ 1.23
DDR1-245ENST00000484556 DIXDC1Q155Q3 683 aa22.72■■□□□ 1.23
DDR1-245ENST00000484556 TREML2Q5T2D2 321 aa22.72■■□□□ 1.23
DDR1-245ENST00000484556 BEND3Q5T5X7 828 aa22.72■■□□□ 1.23
DDR1-245ENST00000484556 TRIB2Q92519 343 aa22.72■■□□□ 1.23
DDR1-245ENST00000484556 TTC28Q96AY4 2481 aa22.71■■□□□ 1.23
DDR1-245ENST00000484556 CACNA1FO60840 1977 aa22.71■■□□□ 1.23
DDR1-245ENST00000484556 AGTPBP1Q9UPW5 1226 aa22.71■■□□□ 1.23
DDR1-245ENST00000484556 SUGT1Q9Y2Z0 365 aa22.71■■□□□ 1.23
DDR1-245ENST00000484556 MROH5Q6ZUA9 1318 aa22.71■■□□□ 1.23
DDR1-245ENST00000484556 MUC3AQ02505 3323 aa22.71■■□□□ 1.23
DDR1-245ENST00000484556 MAST2Q6P0Q8 1798 aa22.71■■□□□ 1.23
DDR1-245ENST00000484556 COL6A1P12109 1028 aa22.7■■□□□ 1.22
DDR1-245ENST00000484556 GJD2Q9UKL4 321 aa22.7■■□□□ 1.22
DDR1-245ENST00000484556 PRKAR2AP13861 404 aaKnown RBP22.69■■□□□ 1.22
DDR1-245ENST00000484556 METTL24Q5JXM2 366 aa22.69■■□□□ 1.22
DDR1-245ENST00000484556 MYLIPQ8WY64 445 aa22.69■■□□□ 1.22
DDR1-245ENST00000484556 SPINK5Q9NQ38 1064 aaPredicted RBP22.69■■□□□ 1.22
DDR1-245ENST00000484556 LOC285556D6RIA3 1793 aa22.68■■□□□ 1.22
DDR1-245ENST00000484556 LRRC24Q50LG9 513 aa22.68■■□□□ 1.22
DDR1-245ENST00000484556 USP40Q9NVE5 1235 aa22.68■■□□□ 1.22
DDR1-245ENST00000484556 FRMPD3Q5JV73 1810 aa22.68■■□□□ 1.22
DDR1-245ENST00000484556 DNAH12Q6ZR08 3092 aa22.68■■□□□ 1.22
DDR1-245ENST00000484556 LTBP2Q14767 1821 aa22.67■■□□□ 1.22
DDR1-245ENST00000484556 CYP2B6P20813 491 aa22.67■■□□□ 1.22
DDR1-245ENST00000484556 SUCLG2Q96I99 432 aa22.67■■□□□ 1.22
DDR1-245ENST00000484556 PNMA3Q9UL41 463 aa22.67■■□□□ 1.22
DDR1-245ENST00000484556 MAP3K21Q5TCX8 1036 aa22.66■■□□□ 1.22
DDR1-245ENST00000484556 LBHD1Q9BQE6 289 aaPredicted RBP22.66■■□□□ 1.22
DDR1-245ENST00000484556 SEMA6BQ9H3T3 888 aa22.66■■□□□ 1.22
DDR1-245ENST00000484556 C9orf78Q9NZ63 289 aaPredicted RBP22.66■■□□□ 1.22
DDR1-245ENST00000484556 LRRFIP2Q9Y608 721 aaKnown RBP22.66■■□□□ 1.22
DDR1-245ENST00000484556 ZEB1P37275 1124 aaPredicted RBP22.65■■□□□ 1.22
DDR1-245ENST00000484556 RGS3P49796 1198 aa22.65■■□□□ 1.22
DDR1-245ENST00000484556 SH3BP5LQ7L8J4 393 aa22.65■■□□□ 1.22
DDR1-245ENST00000484556 VGLL2Q8N8G2 317 aa22.65■■□□□ 1.22
DDR1-245ENST00000484556 SYMPKQ92797 1274 aaKnown RBP22.65■■□□□ 1.22
DDR1-245ENST00000484556 KAZALD1Q96I82 304 aa22.65■■□□□ 1.22
DDR1-245ENST00000484556 PDE8BO95263 885 aa22.64■■□□□ 1.21
DDR1-245ENST00000484556 PRDX5P30044 214 aa22.64■■□□□ 1.21
DDR1-245ENST00000484556 ZSCAN29Q8IWY8 852 aaPredicted RBP22.63■■□□□ 1.21
DDR1-245ENST00000484556 WDR66Q8TBY9 1149 aa22.63■■□□□ 1.21
DDR1-245ENST00000484556 CCND3P30281 292 aaPredicted RBP22.62■■□□□ 1.21
DDR1-245ENST00000484556 GCLCP48506 637 aaPredicted RBP22.62■■□□□ 1.21
DDR1-245ENST00000484556 TTYH1Q9H313 450 aaPredicted RBP22.62■■□□□ 1.21
DDR1-245ENST00000484556 ATAD5Q96QE3 1844 aa22.61■■□□□ 1.21
DDR1-245ENST00000484556 DDTLA6NHG4 134 aaPredicted RBP22.61■■□□□ 1.21
DDR1-245ENST00000484556 PEX10O60683 326 aa22.61■■□□□ 1.21
DDR1-245ENST00000484556 CTNND1O60716 968 aaKnown RBP22.61■■□□□ 1.21
DDR1-245ENST00000484556 FOSL2P15408 326 aa22.61■■□□□ 1.21
DDR1-245ENST00000484556 CACNB2Q08289 660 aaPredicted RBP22.61■■□□□ 1.21
DDR1-245ENST00000484556 LHX8Q68G74 356 aa22.61■■□□□ 1.21
DDR1-245ENST00000484556 MYH2Q9UKX2 1941 aa22.61■■□□□ 1.21
DDR1-245ENST00000484556 PROCA1Q8NCQ7 364 aaPredicted RBP22.6■■□□□ 1.21
DDR1-245ENST00000484556 KLHDC4Q8TBB5 520 aa22.6■■□□□ 1.21
DDR1-245ENST00000484556 ASCC2Q9H1I8 757 aaPredicted RBP22.6■■□□□ 1.21
DDR1-245ENST00000484556 RFX7Q2KHR2 1363 aa22.6■■□□□ 1.21
DDR1-245ENST00000484556 TNFRSF10AO00220 468 aa22.59■■□□□ 1.21
DDR1-245ENST00000484556 IFIT1P09914 478 aaKnown RBP22.59■■□□□ 1.21
DDR1-245ENST00000484556 ZKSCAN1P17029 563 aaPredicted RBP22.59■■□□□ 1.21
DDR1-245ENST00000484556 HMGCS2P54868 508 aa22.59■■□□□ 1.21
DDR1-245ENST00000484556 SHHQ15465 462 aa22.59■■□□□ 1.21
DDR1-245ENST00000484556 C9orf50Q5SZB4 431 aa22.59■■□□□ 1.21
DDR1-245ENST00000484556 SENP6Q9GZR1 1112 aaPredicted RBP22.59■■□□□ 1.21
DDR1-245ENST00000484556 BICC1Q9H694 974 aaKnown RBP22.59■■□□□ 1.21
DDR1-245ENST00000484556 FAM196BA6NMK8 535 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms