RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 SLURP2P0DP57 97 aa15.01□□□□□ -0.01
MSH5-216ENST00000484309 INPP5BP32019 993 aa15.01□□□□□ -0.01
MSH5-216ENST00000484309 TM4SF4P48230 202 aa15.01□□□□□ -0.01
MSH5-216ENST00000484309 SH3BP5LQ7L8J4 393 aa15.01□□□□□ -0.01
MSH5-216ENST00000484309 ADGRA1Q86SQ6 560 aa15.01□□□□□ -0.01
MSH5-216ENST00000484309 CLASRPQ8N2M8 674 aaKnown RBP15.01□□□□□ -0.01
MSH5-216ENST00000484309 HOOK2Q96ED9 719 aa15.01□□□□□ -0.01
MSH5-216ENST00000484309 OTUD5Q96G74 571 aa15.01□□□□□ -0.01
MSH5-216ENST00000484309 IDI2Q9BXS1 227 aa15.01□□□□□ -0.01
MSH5-216ENST00000484309 ZNF341Q9BYN7 854 aa15.01□□□□□ -0.01
MSH5-216ENST00000484309 ANTXR1Q9H6X2 564 aa15.01□□□□□ -0.01
MSH5-216ENST00000484309 SNCAIPQ9Y6H5 919 aa15.01□□□□□ -0.01
MSH5-216ENST00000484309 PTPRFP10586 1907 aa15.01□□□□□ -0.01
MSH5-216ENST00000484309 PHIPQ8WWQ0 1821 aa15.01□□□□□ -0.01
MSH5-216ENST00000484309 DDTLA6NHG4 134 aaPredicted RBP15□□□□□ -0.01
MSH5-216ENST00000484309 IGF2BP3O00425 579 aaKnown RBP eCLIP15□□□□□ -0.01
MSH5-216ENST00000484309 SMARCA5O60264 1052 aaPredicted RBP15□□□□□ -0.01
MSH5-216ENST00000484309 RAB11FIP3O75154 756 aa15□□□□□ -0.01
MSH5-216ENST00000484309 ENTPD3O75355 529 aa15□□□□□ -0.01
MSH5-216ENST00000484309 IDH1O75874 414 aaKnown RBP15□□□□□ -0.01
MSH5-216ENST00000484309 IFIT2P09913 472 aaKnown RBP15□□□□□ -0.01
MSH5-216ENST00000484309 TEX11Q8IYF3 940 aa15□□□□□ -0.01
MSH5-216ENST00000484309 SH3RF3Q8TEJ3 882 aaPredicted RBP15□□□□□ -0.01
MSH5-216ENST00000484309 NOL10Q9BSC4 688 aaKnown RBP15□□□□□ -0.01
MSH5-216ENST00000484309 AATFQ9NY61 560 aaKnown RBP eCLIP15□□□□□ -0.01
MSH5-216ENST00000484309 ATRNL1Q5VV63 1379 aa14.99□□□□□ -0.01
MSH5-216ENST00000484309 NAV1Q8NEY1 1877 aa14.99□□□□□ -0.01
MSH5-216ENST00000484309 IFNL1Q8IU54 200 aa14.99□□□□□ -0.01
MSH5-216ENST00000484309 CRBNQ96SW2 442 aa14.99□□□□□ -0.01
MSH5-216ENST00000484309 R3HDMLQ9H3Y0 253 aa14.99□□□□□ -0.01
MSH5-216ENST00000484309 SPDYE5A6NIY4 337 aa14.98□□□□□ -0.01
MSH5-216ENST00000484309 FAM196BA6NMK8 535 aa14.98□□□□□ -0.01
MSH5-216ENST00000484309 CYP7A1P22680 504 aa14.98□□□□□ -0.01
MSH5-216ENST00000484309 DYNLL1P63167 89 aaKnown RBP14.98□□□□□ -0.01
MSH5-216ENST00000484309 DNAJC2Q99543 621 aaKnown RBP14.98□□□□□ -0.01
MSH5-216ENST00000484309 DGKZQ13574 1117 aa14.97□□□□□ -0.01
MSH5-216ENST00000484309 MAGEB6Q8N7X4 407 aa14.97□□□□□ -0.01
MSH5-216ENST00000484309 MIGA1Q8NAN2 632 aa14.97□□□□□ -0.01
MSH5-216ENST00000484309 EDC3Q96F86 508 aaKnown RBP14.97□□□□□ -0.01
MSH5-216ENST00000484309 LRRCC1Q9C099 1032 aa14.97□□□□□ -0.01
MSH5-216ENST00000484309 PCDHB15Q9Y5E8 787 aa14.97□□□□□ -0.01
MSH5-216ENST00000484309 CCL15-CCL14A0A0B4J2E2 113 aa14.96□□□□□ -0.01
MSH5-216ENST00000484309 GOLIM4O00461 696 aa14.96□□□□□ -0.01
MSH5-216ENST00000484309 BAG3O95817 575 aa14.96□□□□□ -0.01
MSH5-216ENST00000484309 CCL15Q16663 113 aa14.96□□□□□ -0.01
MSH5-216ENST00000484309 ERO1BQ86YB8 467 aa14.96□□□□□ -0.01
MSH5-216ENST00000484309 MAPKAPK5Q8IW41 473 aa14.96□□□□□ -0.01
MSH5-216ENST00000484309 BRI3BPQ8WY22 251 aa14.96□□□□□ -0.01
MSH5-216ENST00000484309 MS4A4AQ96JQ5 239 aa14.96□□□□□ -0.01
MSH5-216ENST00000484309 PTPN18Q99952 460 aa14.96□□□□□ -0.01
MSH5-216ENST00000484309 MCOLN1Q9GZU1 580 aa14.96□□□□□ -0.01
MSH5-216ENST00000484309 OSBPL5Q9H0X9 879 aaPredicted RBP14.96□□□□□ -0.01
MSH5-216ENST00000484309 ZNF112Q9UJU3 913 aa14.96□□□□□ -0.01
MSH5-216ENST00000484309 ZSWIM8A7E2V4 1837 aa14.96□□□□□ -0.01
MSH5-216ENST00000484309 BAZ2AQ9UIF9 1905 aaKnown RBP14.96□□□□□ -0.02
MSH5-216ENST00000484309 IRF6O14896 467 aa14.95□□□□□ -0.02
MSH5-216ENST00000484309 INHBEP58166 350 aa14.95□□□□□ -0.02
MSH5-216ENST00000484309 SLC4A8Q2Y0W8 1093 aa14.95□□□□□ -0.02
MSH5-216ENST00000484309 TGFBRAP1Q8WUH2 860 aa14.95□□□□□ -0.02
MSH5-216ENST00000484309 ZNF296Q8WUU4 475 aaPredicted RBP14.95□□□□□ -0.02
MSH5-216ENST00000484309 ABHD8Q96I13 439 aa14.95□□□□□ -0.02
MSH5-216ENST00000484309 BOLA2Q9H3K6 86 aa14.95□□□□□ -0.02
MSH5-216ENST00000484309 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.95□□□□□ -0.02
MSH5-216ENST00000484309 MYH8P13535 1937 aa14.95□□□□□ -0.02
MSH5-216ENST00000484309 COL2A1P02458 1487 aaPredicted RBP14.95□□□□□ -0.02
MSH5-216ENST00000484309 DDX60LQ5H9U9 1706 aaKnown RBP14.95□□□□□ -0.02
MSH5-216ENST00000484309 PHF20L1A8MW92 1017 aa14.94□□□□□ -0.02
MSH5-216ENST00000484309 GPR25O00155 361 aa14.94□□□□□ -0.02
MSH5-216ENST00000484309 MAP4K4O95819 1239 aaPredicted RBP14.94□□□□□ -0.02
MSH5-216ENST00000484309 ALDH1A1P00352 501 aa14.94□□□□□ -0.02
MSH5-216ENST00000484309 GTF2A2P52657 109 aa14.94□□□□□ -0.02
MSH5-216ENST00000484309 PPP4CP60510 307 aa14.94□□□□□ -0.02
MSH5-216ENST00000484309 MAP3K12Q12852 859 aa14.94□□□□□ -0.02
MSH5-216ENST00000484309 PPIL2Q13356 520 aa14.94□□□□□ -0.02
MSH5-216ENST00000484309 DCTPP1Q9H773 170 aa14.94□□□□□ -0.02
MSH5-216ENST00000484309 FLT1P17948 1338 aa14.93□□□□□ -0.02
MSH5-216ENST00000484309 TESPA1A2RU30 521 aaPredicted RBP14.93□□□□□ -0.02
MSH5-216ENST00000484309 NPM3O75607 178 aaKnown RBP14.93□□□□□ -0.02
MSH5-216ENST00000484309 PLCG2P16885 1265 aa14.93□□□□□ -0.02
MSH5-216ENST00000484309 PPATQ06203 517 aa14.93□□□□□ -0.02
MSH5-216ENST00000484309 CRHR2Q13324 411 aa14.93□□□□□ -0.02
MSH5-216ENST00000484309 NOL9Q5SY16 702 aaKnown RBP14.93□□□□□ -0.02
MSH5-216ENST00000484309 OTUD7BQ6GQQ9 843 aa14.93□□□□□ -0.02
MSH5-216ENST00000484309 CCDC84Q86UT8 332 aaPredicted RBP14.93□□□□□ -0.02
MSH5-216ENST00000484309 FAM43AQ8N2R8 423 aa14.93□□□□□ -0.02
MSH5-216ENST00000484309 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.93□□□□□ -0.02
MSH5-216ENST00000484309 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.93□□□□□ -0.02
MSH5-216ENST00000484309 SAP30BPQ9UHR5 308 aaKnown RBP14.93□□□□□ -0.02
MSH5-216ENST00000484309 PDE6AP16499 860 aa14.92□□□□□ -0.02
MSH5-216ENST00000484309 SNAPC2Q13487 334 aa14.92□□□□□ -0.02
MSH5-216ENST00000484309 TTF1Q15361 905 aaPredicted RBP14.92□□□□□ -0.02
MSH5-216ENST00000484309 TAF1CQ15572 869 aaPredicted RBP14.92□□□□□ -0.02
MSH5-216ENST00000484309 SLFNL1Q499Z3 407 aa14.92□□□□□ -0.02
MSH5-216ENST00000484309 TSHZ3Q63HK5 1081 aa14.92□□□□□ -0.02
MSH5-216ENST00000484309 SCYL3Q8IZE3 742 aa14.92□□□□□ -0.02
MSH5-216ENST00000484309 CFHR5Q9BXR6 569 aa14.92□□□□□ -0.02
MSH5-216ENST00000484309 PAG1Q9NWQ8 432 aa14.92□□□□□ -0.02
MSH5-216ENST00000484309 FKTNO75072 461 aa14.91□□□□□ -0.02
MSH5-216ENST00000484309 CETPP11597 493 aa14.91□□□□□ -0.02
MSH5-216ENST00000484309 ATP5JP18859 108 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms