RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 C4orf48Q5BLP8 95 aa7.77□□□□□ -1.17
PTCD3-215ENST00000484203 BEND3Q5T5X7 828 aa7.77□□□□□ -1.17
PTCD3-215ENST00000484203 MAP1SQ66K74 1059 aaPredicted RBP7.77□□□□□ -1.17
PTCD3-215ENST00000484203 G2E3Q7L622 706 aa7.77□□□□□ -1.17
PTCD3-215ENST00000484203 SH3RF1Q7Z6J0 888 aa7.77□□□□□ -1.17
PTCD3-215ENST00000484203 ZBTB33Q86T24 672 aa7.77□□□□□ -1.17
PTCD3-215ENST00000484203 CYP4X1Q8N118 509 aa7.77□□□□□ -1.17
PTCD3-215ENST00000484203 HHIPL1Q96JK4 782 aa7.77□□□□□ -1.17
PTCD3-215ENST00000484203 SRCIN1Q9C0H9 1055 aa7.77□□□□□ -1.17
PTCD3-215ENST00000484203 COA1Q9GZY4 146 aa7.77□□□□□ -1.17
PTCD3-215ENST00000484203 GREM2Q9H772 168 aa7.77□□□□□ -1.17
PTCD3-215ENST00000484203 GDPD2Q9HCC8 539 aa7.77□□□□□ -1.17
PTCD3-215ENST00000484203 C9orf78Q9NZ63 289 aaPredicted RBP7.77□□□□□ -1.17
PTCD3-215ENST00000484203 MINPP1Q9UNW1 487 aa7.77□□□□□ -1.17
PTCD3-215ENST00000484203 MYO3BQ8WXR4 1341 aa7.77□□□□□ -1.17
PTCD3-215ENST00000484203 CNTNAP1P78357 1384 aa7.76□□□□□ -1.17
PTCD3-215ENST00000484203 TTC24A2A3L6 582 aaPredicted RBP7.76□□□□□ -1.17
PTCD3-215ENST00000484203 USP17L3A6NCW0 530 aa7.76□□□□□ -1.17
PTCD3-215ENST00000484203 USP17L4A6NCW7 530 aa7.76□□□□□ -1.17
PTCD3-215ENST00000484203 RASSF10A6NK89 507 aa7.76□□□□□ -1.17
PTCD3-215ENST00000484203 YDJCA8MPS7 323 aa7.76□□□□□ -1.17
PTCD3-215ENST00000484203 GRM8O00222 908 aa7.76□□□□□ -1.17
PTCD3-215ENST00000484203 PSMD14O00487 310 aa7.76□□□□□ -1.17
PTCD3-215ENST00000484203 ITGA6P23229 1130 aa7.76□□□□□ -1.17
PTCD3-215ENST00000484203 ABL2P42684 1182 aa7.76□□□□□ -1.17
PTCD3-215ENST00000484203 KCNJ4P48050 445 aa7.76□□□□□ -1.17
PTCD3-215ENST00000484203 HTRA3P83110 453 aa7.76□□□□□ -1.17
PTCD3-215ENST00000484203 MAP2K1Q02750 393 aaPredicted RBP7.76□□□□□ -1.17
PTCD3-215ENST00000484203 CCDC57Q2TAC2 916 aa7.76□□□□□ -1.17
PTCD3-215ENST00000484203 DEFB115Q30KQ5 88 aa7.76□□□□□ -1.17
PTCD3-215ENST00000484203 ALDH1L2Q3SY69 923 aa7.76□□□□□ -1.17
PTCD3-215ENST00000484203 ZNF787Q6DD87 383 aa7.76□□□□□ -1.17
PTCD3-215ENST00000484203 USP17L1Q7RTZ2 530 aa7.76□□□□□ -1.17
PTCD3-215ENST00000484203 OGFOD1Q8N543 542 aa7.76□□□□□ -1.17
PTCD3-215ENST00000484203 SNIP1Q8TAD8 396 aaKnown RBP7.76□□□□□ -1.17
PTCD3-215ENST00000484203 FAM174AQ8TBP5 190 aa7.76□□□□□ -1.17
PTCD3-215ENST00000484203 AIDAQ96BJ3 306 aa7.76□□□□□ -1.17
PTCD3-215ENST00000484203 DCPSQ96C86 337 aaKnown RBP7.76□□□□□ -1.17
PTCD3-215ENST00000484203 DBNDD1Q9H9R9 158 aa7.76□□□□□ -1.17
PTCD3-215ENST00000484203 ABT1Q9ULW3 272 aaKnown RBP7.76□□□□□ -1.17
PTCD3-215ENST00000484203 ARFGEF2Q9Y6D5 1785 aa7.76□□□□□ -1.17
PTCD3-215ENST00000484203 NUP98P52948 1817 aa7.75□□□□□ -1.17
PTCD3-215ENST00000484203 SBF1O95248 1867 aa7.75□□□□□ -1.17
PTCD3-215ENST00000484203 MED23Q9ULK4 1368 aa7.75□□□□□ -1.17
PTCD3-215ENST00000484203 SIAH2O43255 324 aa7.75□□□□□ -1.17
PTCD3-215ENST00000484203 RAD21O60216 631 aa7.75□□□□□ -1.17
PTCD3-215ENST00000484203 CCT4P50991 539 aaKnown RBP7.75□□□□□ -1.17
PTCD3-215ENST00000484203 CASP7P55210 303 aa7.75□□□□□ -1.17
PTCD3-215ENST00000484203 TAF7LQ5H9L4 462 aa7.75□□□□□ -1.17
PTCD3-215ENST00000484203 STRIP1Q5VSL9 837 aa7.75□□□□□ -1.17
PTCD3-215ENST00000484203 CCDC85AQ96PX6 553 aaPredicted RBP7.75□□□□□ -1.17
PTCD3-215ENST00000484203 MKRN1Q9UHC7 482 aaKnown RBP7.75□□□□□ -1.17
PTCD3-215ENST00000484203 COG6Q9Y2V7 657 aa7.75□□□□□ -1.17
PTCD3-215ENST00000484203 GPSM3Q9Y4H4 160 aa7.75□□□□□ -1.17
PTCD3-215ENST00000484203 ZNF609O15014 1411 aa7.75□□□□□ -1.17
PTCD3-215ENST00000484203 FAM187AA6NFU0 413 aa7.74□□□□□ -1.17
PTCD3-215ENST00000484203 ZBBXA8MT70 800 aa7.74□□□□□ -1.17
PTCD3-215ENST00000484203 CA12O43570 354 aa7.74□□□□□ -1.17
PTCD3-215ENST00000484203 MAP2K2P36507 400 aa7.74□□□□□ -1.17
PTCD3-215ENST00000484203 ZNF280AP59817 542 aaPredicted RBP7.74□□□□□ -1.17
PTCD3-215ENST00000484203 SLFN5Q08AF3 891 aa7.74□□□□□ -1.17
PTCD3-215ENST00000484203 ARID5BQ14865 1188 aa7.74□□□□□ -1.17
PTCD3-215ENST00000484203 SLC4A10Q6U841 1118 aa7.74□□□□□ -1.17
PTCD3-215ENST00000484203 C15orf52Q6ZUT6 534 aaKnown RBP7.74□□□□□ -1.17
PTCD3-215ENST00000484203 KRT26Q7Z3Y9 468 aa7.74□□□□□ -1.17
PTCD3-215ENST00000484203 ADAM32Q8TC27 787 aa7.74□□□□□ -1.17
PTCD3-215ENST00000484203 JARID2Q92833 1246 aaPredicted RBP7.74□□□□□ -1.17
PTCD3-215ENST00000484203 TOR4AQ9NXH8 423 aa7.74□□□□□ -1.17
PTCD3-215ENST00000484203 HDAC9Q9UKV0 1011 aa7.74□□□□□ -1.17
PTCD3-215ENST00000484203 CHMP3Q9Y3E7 222 aa7.74□□□□□ -1.17
PTCD3-215ENST00000484203 TLL2Q9Y6L7 1015 aa7.74□□□□□ -1.17
PTCD3-215ENST00000484203 TIAM2Q8IVF5 1701 aa7.74□□□□□ -1.17
PTCD3-215ENST00000484203 ZNF804BA4D1E1 1349 aa7.74□□□□□ -1.17
PTCD3-215ENST00000484203 SCN4AP35499 1836 aa7.73□□□□□ -1.17
PTCD3-215ENST00000484203 F6X3S4 739 aa7.73□□□□□ -1.17
PTCD3-215ENST00000484203 GPR37L1O60883 481 aa7.73□□□□□ -1.17
PTCD3-215ENST00000484203 CELF2O95319 508 aaKnown RBP7.73□□□□□ -1.17
PTCD3-215ENST00000484203 ALDH1A1P00352 501 aa7.73□□□□□ -1.17
PTCD3-215ENST00000484203 FBXO45P0C2W1 286 aa7.73□□□□□ -1.17
PTCD3-215ENST00000484203 HSPA1AP0DMV8 641 aaKnown RBP7.73□□□□□ -1.17
PTCD3-215ENST00000484203 HSPA1BP0DMV9 641 aaKnown RBP7.73□□□□□ -1.17
PTCD3-215ENST00000484203 CTCFP49711 727 aaPredicted RBP7.73□□□□□ -1.17
PTCD3-215ENST00000484203 VEGFBP49765 207 aa7.73□□□□□ -1.17
PTCD3-215ENST00000484203 FKBP1BP68106 108 aa7.73□□□□□ -1.17
PTCD3-215ENST00000484203 KIF4BQ2VIQ3 1234 aa7.73□□□□□ -1.17
PTCD3-215ENST00000484203 LMBR1LQ6UX01 489 aa7.73□□□□□ -1.17
PTCD3-215ENST00000484203 LDHAL6AQ6ZMR3 332 aa7.73□□□□□ -1.17
PTCD3-215ENST00000484203 ZNF804AQ7Z570 1209 aa7.73□□□□□ -1.17
PTCD3-215ENST00000484203 C2orf69Q8N8R5 385 aa7.73□□□□□ -1.17
PTCD3-215ENST00000484203 POM121Q96HA1 1249 aa7.73□□□□□ -1.17
PTCD3-215ENST00000484203 OCSTAMPQ9BR26 566 aa7.73□□□□□ -1.17
PTCD3-215ENST00000484203 UTYO14607 1347 aa7.73□□□□□ -1.17
PTCD3-215ENST00000484203 PITPNM2Q9BZ72 1349 aa7.73□□□□□ -1.17
PTCD3-215ENST00000484203 WDR33Q9C0J8 1336 aaKnown RBP7.73□□□□□ -1.17
PTCD3-215ENST00000484203 PCNTO95613 3336 aa7.72□□□□□ -1.17
PTCD3-215ENST00000484203 HIRAP54198 1017 aaPredicted RBP7.72□□□□□ -1.17
PTCD3-215ENST00000484203 FKBP1AP62942 108 aaKnown RBP7.72□□□□□ -1.17
PTCD3-215ENST00000484203 FOXO4P98177 505 aa7.72□□□□□ -1.17
PTCD3-215ENST00000484203 CHRNDQ07001 517 aa7.72□□□□□ -1.17
PTCD3-215ENST00000484203 TBC1D10BQ4KMP7 808 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms