RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 NBPF3Q9H094 633 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 ARMT1Q9H993 441 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 EPB41L4AQ9HCS5 686 aaPredicted RBP11.27□□□□□ -0.61
UFD1-208ENST00000484101 ATP8A2Q9NTI2 1148 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 PODXL2Q9NZ53 605 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 ANKIB1Q9P2G1 1089 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 ABCF2Q9UG63 623 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 CNPY2Q9Y2B0 182 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 ECM29Q5VYK3 1845 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 STK36Q9NRP7 1315 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 IRS2Q9Y4H2 1338 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 ANKRD31Q8N7Z5 1873 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 NAV1Q8NEY1 1877 aa11.27□□□□□ -0.61
UFD1-208ENST00000484101 FOXN1O15353 648 aa11.26□□□□□ -0.61
UFD1-208ENST00000484101 FIBPO43427 364 aa11.26□□□□□ -0.61
UFD1-208ENST00000484101 JAK2O60674 1132 aa11.26□□□□□ -0.61
UFD1-208ENST00000484101 LDHCP07864 332 aa11.26□□□□□ -0.61
UFD1-208ENST00000484101 METAP2P50579 478 aaKnown RBP eCLIP11.26□□□□□ -0.61
UFD1-208ENST00000484101 DNM1Q05193 864 aaKnown RBP11.26□□□□□ -0.61
UFD1-208ENST00000484101 RESTQ13127 1097 aa11.26□□□□□ -0.61
UFD1-208ENST00000484101 BRAPQ7Z569 592 aa11.26□□□□□ -0.61
UFD1-208ENST00000484101 AMIGO3Q86WK7 504 aa11.26□□□□□ -0.61
UFD1-208ENST00000484101 SLF2Q8IX21 1173 aa11.26□□□□□ -0.61
UFD1-208ENST00000484101 SMC1BQ8NDV3 1235 aa11.26□□□□□ -0.61
UFD1-208ENST00000484101 ESR2Q92731 530 aa11.26□□□□□ -0.61
UFD1-208ENST00000484101 NSUN4Q96CB9 384 aaKnown RBP11.26□□□□□ -0.61
UFD1-208ENST00000484101 ABHD8Q96I13 439 aa11.26□□□□□ -0.61
UFD1-208ENST00000484101 LRRC2Q9BYS8 371 aa11.26□□□□□ -0.61
UFD1-208ENST00000484101 ARPP21Q9UBL0 812 aaPredicted RBP11.26□□□□□ -0.61
UFD1-208ENST00000484101 GOLGA6L4A6NEF3 574 aa11.25□□□□□ -0.61
UFD1-208ENST00000484101 CCDC69A6NI79 296 aa11.25□□□□□ -0.61
UFD1-208ENST00000484101 SNAP23O00161 211 aa11.25□□□□□ -0.61
UFD1-208ENST00000484101 POLRMTO00411 1230 aaKnown RBP11.25□□□□□ -0.61
UFD1-208ENST00000484101 ZBTB43O43298 467 aa11.25□□□□□ -0.61
UFD1-208ENST00000484101 CTDNEP1O95476 244 aa11.25□□□□□ -0.61
UFD1-208ENST00000484101 PPARAQ07869 468 aa11.25□□□□□ -0.61
UFD1-208ENST00000484101 COL9A3Q14050 684 aaPredicted RBP11.25□□□□□ -0.61
UFD1-208ENST00000484101 TMEM67Q5HYA8 995 aa11.25□□□□□ -0.61
UFD1-208ENST00000484101 APOA5Q6Q788 366 aa11.25□□□□□ -0.61
UFD1-208ENST00000484101 DZIP1Q86YF9 867 aaKnown RBP11.25□□□□□ -0.61
UFD1-208ENST00000484101 AMOTL1Q8IY63 956 aa11.25□□□□□ -0.61
UFD1-208ENST00000484101 TDRD7Q8NHU6 1098 aaKnown RBP11.25□□□□□ -0.61
UFD1-208ENST00000484101 TBC1D22AQ8WUA7 517 aa11.25□□□□□ -0.61
UFD1-208ENST00000484101 NOL10Q9BSC4 688 aaKnown RBP11.25□□□□□ -0.61
UFD1-208ENST00000484101 DDX19AQ9NUU7 478 aaKnown RBP11.25□□□□□ -0.61
UFD1-208ENST00000484101 TMEM63CQ9P1W3 806 aa11.25□□□□□ -0.61
UFD1-208ENST00000484101 GGA1Q9UJY5 639 aa11.25□□□□□ -0.61
UFD1-208ENST00000484101 NAP1L2Q9ULW6 460 aaPredicted RBP11.25□□□□□ -0.61
UFD1-208ENST00000484101 NEDD4P46934 1319 aa11.25□□□□□ -0.61
UFD1-208ENST00000484101 BAZ2AQ9UIF9 1905 aaKnown RBP11.25□□□□□ -0.61
UFD1-208ENST00000484101 A0A0G2JLW4 131 aa11.24□□□□□ -0.61
UFD1-208ENST00000484101 B4E1Z4 1266 aa11.24□□□□□ -0.61
UFD1-208ENST00000484101 FGRP09769 529 aa11.24□□□□□ -0.61
UFD1-208ENST00000484101 XRCC6P12956 609 aaKnown RBP eCLIP11.24□□□□□ -0.61
UFD1-208ENST00000484101 PLCG2P16885 1265 aa11.24□□□□□ -0.61
UFD1-208ENST00000484101 NASPP49321 788 aaPredicted RBP11.24□□□□□ -0.61
UFD1-208ENST00000484101 CCDC173Q0VFZ6 552 aa11.24□□□□□ -0.61
UFD1-208ENST00000484101 SBK1Q52WX2 424 aa11.24□□□□□ -0.61
UFD1-208ENST00000484101 CCDC178Q5BJE1 867 aa11.24□□□□□ -0.61
UFD1-208ENST00000484101 NFXL1Q6ZNB6 911 aa11.24□□□□□ -0.61
UFD1-208ENST00000484101 IGDCC4Q8TDY8 1250 aa11.24□□□□□ -0.61
UFD1-208ENST00000484101 C8orf76Q96K31 380 aa11.24□□□□□ -0.61
UFD1-208ENST00000484101 SPATA32Q96LK8 384 aa11.24□□□□□ -0.61
UFD1-208ENST00000484101 UBAC1Q9BSL1 405 aa11.24□□□□□ -0.61
UFD1-208ENST00000484101 LY9Q9HBG7 655 aa11.24□□□□□ -0.61
UFD1-208ENST00000484101 ORC3Q9UBD5 711 aaPredicted RBP11.24□□□□□ -0.61
UFD1-208ENST00000484101 HPS5Q9UPZ3 1129 aa11.24□□□□□ -0.61
UFD1-208ENST00000484101 SUGT1Q9Y2Z0 365 aa11.24□□□□□ -0.61
UFD1-208ENST00000484101 SLC12A7Q9Y666 1083 aa11.24□□□□□ -0.61
UFD1-208ENST00000484101 FOCADQ5VW36 1801 aa11.23□□□□□ -0.61
UFD1-208ENST00000484101 MYH6P13533 1939 aa11.23□□□□□ -0.61
UFD1-208ENST00000484101 MYH2Q9UKX2 1941 aa11.23□□□□□ -0.61
UFD1-208ENST00000484101 GOLGA8AA7E2F4 631 aa11.23□□□□□ -0.61
UFD1-208ENST00000484101 IFIT3O14879 490 aaKnown RBP11.23□□□□□ -0.61
UFD1-208ENST00000484101 ORC4O43929 436 aa11.23□□□□□ -0.61
UFD1-208ENST00000484101 KDM4AO75164 1064 aa11.23□□□□□ -0.61
UFD1-208ENST00000484101 BAG3O95817 575 aa11.23□□□□□ -0.61
UFD1-208ENST00000484101 LDHBP07195 334 aaKnown RBP11.23□□□□□ -0.61
UFD1-208ENST00000484101 CALM1P0DP23 149 aa11.23□□□□□ -0.61
UFD1-208ENST00000484101 CALM2P0DP24 149 aa11.23□□□□□ -0.61
UFD1-208ENST00000484101 CALM3P0DP25 149 aa11.23□□□□□ -0.61
UFD1-208ENST00000484101 IL1R1P14778 569 aa11.23□□□□□ -0.61
UFD1-208ENST00000484101 CCT2P78371 535 aaKnown RBP11.23□□□□□ -0.61
UFD1-208ENST00000484101 MECOMQ03112 1051 aa11.23□□□□□ -0.61
UFD1-208ENST00000484101 WTAPQ15007 396 aa11.23□□□□□ -0.61
UFD1-208ENST00000484101 CYB5R4Q7L1T6 521 aa11.23□□□□□ -0.61
UFD1-208ENST00000484101 IQCA1Q86XH1 822 aa11.23□□□□□ -0.61
UFD1-208ENST00000484101 TRIM22Q8IYM9 498 aa11.23□□□□□ -0.61
UFD1-208ENST00000484101 MIGA1Q8NAN2 632 aa11.23□□□□□ -0.61
UFD1-208ENST00000484101 LEO1Q8WVC0 666 aaPredicted RBP11.23□□□□□ -0.61
UFD1-208ENST00000484101 DDX11Q96FC9 970 aa11.23□□□□□ -0.61
UFD1-208ENST00000484101 TSPY26PQ9H489 355 aa11.23□□□□□ -0.61
UFD1-208ENST00000484101 RRAGCQ9HB90 399 aa11.23□□□□□ -0.61
UFD1-208ENST00000484101 BRPF3Q9ULD4 1205 aa11.23□□□□□ -0.61
UFD1-208ENST00000484101 ROBO3Q96MS0 1386 aa11.23□□□□□ -0.61
UFD1-208ENST00000484101 DDX60LQ5H9U9 1706 aaKnown RBP11.23□□□□□ -0.61
UFD1-208ENST00000484101 ALDH1B1P30837 517 aa11.22□□□□□ -0.61
UFD1-208ENST00000484101 PDE6BP35913 854 aa11.22□□□□□ -0.61
UFD1-208ENST00000484101 PDE4BQ07343 736 aa11.22□□□□□ -0.61
UFD1-208ENST00000484101 TRIM29Q14134 588 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms