RNA–Protein interactions for RNA: ENST00000484077.1

RIF1-210, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 782 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-210ENST00000484077 SLC26A8Q96RN1 970 aa8.99□□□□□ -0.97
RIF1-210ENST00000484077 FAM129BQ96TA1 746 aa8.99□□□□□ -0.97
RIF1-210ENST00000484077 LACRTQ9GZZ8 138 aa8.99□□□□□ -0.97
RIF1-210ENST00000484077 ALKQ9UM73 1620 aa8.98□□□□□ -0.97
RIF1-210ENST00000484077 SPATA31E1Q6ZUB1 1445 aa8.98□□□□□ -0.97
RIF1-210ENST00000484077 KNDC1Q76NI1 1749 aa8.98□□□□□ -0.97
RIF1-210ENST00000484077 H3BRJ5 948 aa8.98□□□□□ -0.97
RIF1-210ENST00000484077 EIF4EBP3O60516 100 aaPredicted RBP8.98□□□□□ -0.97
RIF1-210ENST00000484077 RSPO4Q2I0M5 234 aaPredicted RBP8.98□□□□□ -0.97
RIF1-210ENST00000484077 NKAPLQ5M9Q1 402 aa8.98□□□□□ -0.97
RIF1-210ENST00000484077 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.98□□□□□ -0.97
RIF1-210ENST00000484077 MPHOSPH9Q99550 1183 aa8.98□□□□□ -0.97
RIF1-210ENST00000484077 SSBP4Q9BWG4 385 aaPredicted RBP8.98□□□□□ -0.97
RIF1-210ENST00000484077 OSGEPQ9NPF4 335 aa8.98□□□□□ -0.97
RIF1-210ENST00000484077 FOXD3Q9UJU5 478 aaPredicted RBP8.98□□□□□ -0.97
RIF1-210ENST00000484077 NALCNQ8IZF0 1738 aa8.97□□□□□ -0.97
RIF1-210ENST00000484077 MYOM2P54296 1465 aa8.97□□□□□ -0.97
RIF1-210ENST00000484077 SOWAHDA6NJG2 315 aa8.97□□□□□ -0.97
RIF1-210ENST00000484077 LINC01387J3KSC0 135 aa8.97□□□□□ -0.97
RIF1-210ENST00000484077 PIP4K2BP78356 416 aa8.97□□□□□ -0.97
RIF1-210ENST00000484077 ZNF326Q5BKZ1 582 aaKnown RBP8.97□□□□□ -0.97
RIF1-210ENST00000484077 OSMRQ99650 979 aa8.97□□□□□ -0.97
RIF1-210ENST00000484077 BHLHE41Q9C0J9 482 aaPredicted RBP8.97□□□□□ -0.97
RIF1-210ENST00000484077 AKTIPQ9H8T0 292 aa8.97□□□□□ -0.97
RIF1-210ENST00000484077 ASXL1Q8IXJ9 1541 aa8.96□□□□□ -0.97
RIF1-210ENST00000484077 FSCN2O14926 492 aa8.96□□□□□ -0.98
RIF1-210ENST00000484077 EPHA1P21709 976 aa8.96□□□□□ -0.98
RIF1-210ENST00000484077 CD68P34810 354 aaPredicted RBP8.96□□□□□ -0.98
RIF1-210ENST00000484077 NXPE3Q969Y0 559 aa8.96□□□□□ -0.98
RIF1-210ENST00000484077 DMRTB1Q96MA1 342 aa8.96□□□□□ -0.98
RIF1-210ENST00000484077 ZKSCAN3Q9BRR0 538 aa8.96□□□□□ -0.98
RIF1-210ENST00000484077 RBCK1Q9BYM8 510 aa8.96□□□□□ -0.98
RIF1-210ENST00000484077 SEC31BQ9NQW1 1179 aa8.96□□□□□ -0.98
RIF1-210ENST00000484077 SOX13Q9UN79 622 aa8.96□□□□□ -0.98
RIF1-210ENST00000484077 F8W735 103 aaPredicted RBP8.95□□□□□ -0.98
RIF1-210ENST00000484077 NOS3P29474 1203 aa8.95□□□□□ -0.98
RIF1-210ENST00000484077 Q6ZS46 218 aa8.95□□□□□ -0.98
RIF1-210ENST00000484077 GALNT12Q8IXK2 581 aa8.95□□□□□ -0.98
RIF1-210ENST00000484077 BSNDQ8WZ55 320 aa8.95□□□□□ -0.98
RIF1-210ENST00000484077 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.95□□□□□ -0.98
RIF1-210ENST00000484077 PIK3R4Q99570 1358 aa8.95□□□□□ -0.98
RIF1-210ENST00000484077 PATL2C9JE40 543 aaKnown RBP8.94□□□□□ -0.98
RIF1-210ENST00000484077 TM4SF5O14894 197 aa8.94□□□□□ -0.98
RIF1-210ENST00000484077 ACPPP15309 386 aa8.94□□□□□ -0.98
RIF1-210ENST00000484077 IREB2P48200 963 aaKnown RBP8.94□□□□□ -0.98
RIF1-210ENST00000484077 ARL4DP49703 201 aa8.94□□□□□ -0.98
RIF1-210ENST00000484077 GALNT11Q8NCW6 608 aa8.94□□□□□ -0.98
RIF1-210ENST00000484077 ALKBH8Q96BT7 664 aaKnown RBP8.94□□□□□ -0.98
RIF1-210ENST00000484077 DNAJC25Q9H1X3 360 aa8.94□□□□□ -0.98
RIF1-210ENST00000484077 SH2B1Q9NRF2 756 aaPredicted RBP8.94□□□□□ -0.98
RIF1-210ENST00000484077 PIK3C2GO75747 1445 aa8.94□□□□□ -0.98
RIF1-210ENST00000484077 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.94□□□□□ -0.98
RIF1-210ENST00000484077 DYRK3O43781 588 aa8.93□□□□□ -0.98
RIF1-210ENST00000484077 KCNA1Q09470 495 aa8.93□□□□□ -0.98
RIF1-210ENST00000484077 PEAR1Q5VY43 1037 aaPredicted RBP8.93□□□□□ -0.98
RIF1-210ENST00000484077 ADAMTSL4Q6UY14 1074 aa8.93□□□□□ -0.98
RIF1-210ENST00000484077 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.93□□□□□ -0.98
RIF1-210ENST00000484077 DZIP1LQ8IYY4 767 aaKnown RBP8.93□□□□□ -0.98
RIF1-210ENST00000484077 SEMA6BQ9H3T3 888 aa8.93□□□□□ -0.98
RIF1-210ENST00000484077 SOX17Q9H6I2 414 aaPredicted RBP8.93□□□□□ -0.98
RIF1-210ENST00000484077 ANKRD30BQ9BXX2 1392 aa8.93□□□□□ -0.98
RIF1-210ENST00000484077 PRAG1Q86YV5 1406 aa8.93□□□□□ -0.98
RIF1-210ENST00000484077 NRXN1Q9ULB1 1477 aa8.93□□□□□ -0.98
RIF1-210ENST00000484077 ROBO1Q9Y6N7 1651 aa8.93□□□□□ -0.98
RIF1-210ENST00000484077 PTCH1Q13635 1447 aa8.92□□□□□ -0.98
RIF1-210ENST00000484077 PTPRUQ92729 1446 aa8.92□□□□□ -0.98
RIF1-210ENST00000484077 TMEM94Q12767 1356 aa8.92□□□□□ -0.98
RIF1-210ENST00000484077 CPNE3O75131 537 aaKnown RBP8.92□□□□□ -0.98
RIF1-210ENST00000484077 TP53INP1Q96A56 240 aa8.92□□□□□ -0.98
RIF1-210ENST00000484077 TRAIPQ9BWF2 469 aa8.92□□□□□ -0.98
RIF1-210ENST00000484077 RPGRIP1LQ68CZ1 1315 aa8.91□□□□□ -0.98
RIF1-210ENST00000484077 IGHA2P01877 340 aa8.91□□□□□ -0.98
RIF1-210ENST00000484077 KCNA6P17658 529 aa8.91□□□□□ -0.98
RIF1-210ENST00000484077 FOXD4L6Q3SYB3 417 aaPredicted RBP8.91□□□□□ -0.98
RIF1-210ENST00000484077 KIAA0319Q5VV43 1072 aa8.91□□□□□ -0.98
RIF1-210ENST00000484077 TXNDC11Q6PKC3 985 aa8.91□□□□□ -0.98
RIF1-210ENST00000484077 FOXD4L3Q6VB84 417 aaPredicted RBP8.91□□□□□ -0.98
RIF1-210ENST00000484077 DCTN4Q9UJW0 460 aa8.91□□□□□ -0.98
RIF1-210ENST00000484077 METP08581 1390 aa8.9□□□□□ -0.98
RIF1-210ENST00000484077 TOM1O60784 492 aa8.9□□□□□ -0.98
RIF1-210ENST00000484077 MEGF10Q96KG7 1140 aa8.9□□□□□ -0.98
RIF1-210ENST00000484077 HHIPQ96QV1 700 aa8.9□□□□□ -0.98
RIF1-210ENST00000484077 CEP41Q9BYV8 373 aa8.9□□□□□ -0.98
RIF1-210ENST00000484077 TBX22Q9Y458 520 aa8.9□□□□□ -0.98
RIF1-210ENST00000484077 KIAA1210Q9ULL0 1709 aa8.9□□□□□ -0.98
RIF1-210ENST00000484077 MSH6P52701 1360 aa8.89□□□□□ -0.99
RIF1-210ENST00000484077 ARHGEF28Q8N1W1 1705 aaKnown RBP8.89□□□□□ -0.99
RIF1-210ENST00000484077 TRPA1O75762 1119 aa8.89□□□□□ -0.99
RIF1-210ENST00000484077 C19orf57Q0VDD7 668 aa8.89□□□□□ -0.99
RIF1-210ENST00000484077 IKBKEQ14164 716 aa8.89□□□□□ -0.99
RIF1-210ENST00000484077 UVSSAQ2YD98 709 aa8.89□□□□□ -0.99
RIF1-210ENST00000484077 SLC51AQ86UW1 340 aa8.89□□□□□ -0.99
RIF1-210ENST00000484077 CCNJLQ8IV13 435 aa8.89□□□□□ -0.99
RIF1-210ENST00000484077 TMC1Q8TDI8 760 aa8.89□□□□□ -0.99
RIF1-210ENST00000484077 KLHDC7BQ96G42 594 aa8.89□□□□□ -0.99
RIF1-210ENST00000484077 CDC42BPGQ6DT37 1551 aa8.89□□□□□ -0.99
RIF1-210ENST00000484077 DCCP43146 1447 aa8.88□□□□□ -0.99
RIF1-210ENST00000484077 NCOA3Q9Y6Q9 1424 aa8.88□□□□□ -0.99
RIF1-210ENST00000484077 A0A1W2PP55 124 aa8.88□□□□□ -0.99
RIF1-210ENST00000484077 GPR182O15218 404 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms