RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 DDX46Q7L014 1031 aaKnown RBP11.27□□□□□ -0.61
COL8A1-207ENST00000483969 PRICKLE2Q7Z3G6 844 aa11.27□□□□□ -0.61
COL8A1-207ENST00000483969 CYP2U1Q7Z449 544 aa11.27□□□□□ -0.61
COL8A1-207ENST00000483969 SYNE4Q8N205 404 aa11.27□□□□□ -0.61
COL8A1-207ENST00000483969 RIC1Q4ADV7 1423 aa11.26□□□□□ -0.61
COL8A1-207ENST00000483969 F6X3S4 739 aa11.26□□□□□ -0.61
COL8A1-207ENST00000483969 H7C1W4 665 aa11.26□□□□□ -0.61
COL8A1-207ENST00000483969 APBB1O00213 710 aa11.26□□□□□ -0.61
COL8A1-207ENST00000483969 MEN1O00255 615 aa11.26□□□□□ -0.61
COL8A1-207ENST00000483969 C21orf2O43822 256 aa11.26□□□□□ -0.61
COL8A1-207ENST00000483969 PDE8AO60658 829 aa11.26□□□□□ -0.61
COL8A1-207ENST00000483969 BBOX1O75936 387 aa11.26□□□□□ -0.61
COL8A1-207ENST00000483969 ARHGEF15O94989 841 aa11.26□□□□□ -0.61
COL8A1-207ENST00000483969 YY1P25490 414 aa11.26□□□□□ -0.61
COL8A1-207ENST00000483969 RARSP54136 660 aaKnown RBP11.26□□□□□ -0.61
COL8A1-207ENST00000483969 BRPF1P55201 1214 aaPredicted RBP11.26□□□□□ -0.61
COL8A1-207ENST00000483969 GCKRQ14397 625 aa11.26□□□□□ -0.61
COL8A1-207ENST00000483969 CWF19L2Q2TBE0 894 aaKnown RBP11.26□□□□□ -0.61
COL8A1-207ENST00000483969 BEND3Q5T5X7 828 aa11.26□□□□□ -0.61
COL8A1-207ENST00000483969 PRPF40BQ6NWY9 871 aaKnown RBP11.26□□□□□ -0.61
COL8A1-207ENST00000483969 KCTD17Q8N5Z5 321 aa11.26□□□□□ -0.61
COL8A1-207ENST00000483969 WHAMMQ8TF30 809 aa11.26□□□□□ -0.61
COL8A1-207ENST00000483969 SRCIN1Q9C0H9 1055 aa11.26□□□□□ -0.61
COL8A1-207ENST00000483969 ABCC12Q96J65 1359 aa11.26□□□□□ -0.61
COL8A1-207ENST00000483969 IPO8O15397 1037 aaKnown RBP11.25□□□□□ -0.61
COL8A1-207ENST00000483969 ALDH1L1O75891 902 aa11.25□□□□□ -0.61
COL8A1-207ENST00000483969 RHOQP17081 205 aa11.25□□□□□ -0.61
COL8A1-207ENST00000483969 MAP3K10Q02779 954 aa11.25□□□□□ -0.61
COL8A1-207ENST00000483969 TRIM22Q8IYM9 498 aa11.25□□□□□ -0.61
COL8A1-207ENST00000483969 RTKN2Q8IZC4 609 aa11.25□□□□□ -0.61
COL8A1-207ENST00000483969 BANK1Q8NDB2 785 aa11.25□□□□□ -0.61
COL8A1-207ENST00000483969 ZNF837Q96EG3 531 aaPredicted RBP11.25□□□□□ -0.61
COL8A1-207ENST00000483969 BCL2L13Q9BXK5 485 aa11.25□□□□□ -0.61
COL8A1-207ENST00000483969 API5Q9BZZ5 524 aaKnown RBP11.25□□□□□ -0.61
COL8A1-207ENST00000483969 CUEDC1Q9NWM3 386 aaPredicted RBP11.25□□□□□ -0.61
COL8A1-207ENST00000483969 NOB1Q9ULX3 412 aaKnown RBP11.25□□□□□ -0.61
COL8A1-207ENST00000483969 A0A1W2PRU2 124 aa11.24□□□□□ -0.61
COL8A1-207ENST00000483969 GAS6Q14393 721 aa11.24□□□□□ -0.61
COL8A1-207ENST00000483969 CCDC152Q4G0S7 254 aa11.24□□□□□ -0.61
COL8A1-207ENST00000483969 CCDC93Q567U6 631 aa11.24□□□□□ -0.61
COL8A1-207ENST00000483969 FOXR1Q6PIV2 292 aa11.24□□□□□ -0.61
COL8A1-207ENST00000483969 TMC4Q7Z404 712 aa11.24□□□□□ -0.61
COL8A1-207ENST00000483969 IL27Q8NEV9 243 aa11.24□□□□□ -0.61
COL8A1-207ENST00000483969 C7orf43Q8WVR3 580 aa11.24□□□□□ -0.61
COL8A1-207ENST00000483969 ARHGAP45Q92619 1136 aa11.24□□□□□ -0.61
COL8A1-207ENST00000483969 JARID2Q92833 1246 aaPredicted RBP11.24□□□□□ -0.61
COL8A1-207ENST00000483969 C9orf78Q9NZ63 289 aaPredicted RBP11.24□□□□□ -0.61
COL8A1-207ENST00000483969 CDHR2Q9BYE9 1310 aa11.24□□□□□ -0.61
COL8A1-207ENST00000483969 NRXN2Q9P2S2 1712 aa11.23□□□□□ -0.61
COL8A1-207ENST00000483969 GRAPQ13588 217 aa11.23□□□□□ -0.61
COL8A1-207ENST00000483969 GRAPLQ8TC17 118 aaPredicted RBP11.23□□□□□ -0.61
COL8A1-207ENST00000483969 DYRK1BQ9Y463 629 aa11.23□□□□□ -0.61
COL8A1-207ENST00000483969 NDUFB9Q9Y6M9 179 aa11.23□□□□□ -0.61
COL8A1-207ENST00000483969 BCORQ6W2J9 1755 aa11.23□□□□□ -0.61
COL8A1-207ENST00000483969 GRM8O00222 908 aa11.22□□□□□ -0.61
COL8A1-207ENST00000483969 CCT4P50991 539 aaKnown RBP11.22□□□□□ -0.61
COL8A1-207ENST00000483969 MARSP56192 900 aaKnown RBP11.22□□□□□ -0.61
COL8A1-207ENST00000483969 RPS8P62241 208 aaKnown RBP11.22□□□□□ -0.61
COL8A1-207ENST00000483969 CLN3Q13286 438 aa11.22□□□□□ -0.61
COL8A1-207ENST00000483969 KANK3Q6NY19 840 aa11.22□□□□□ -0.61
COL8A1-207ENST00000483969 UBE3BQ7Z3V4 1068 aa11.22□□□□□ -0.61
COL8A1-207ENST00000483969 SP8Q8IXZ3 490 aa11.22□□□□□ -0.61
COL8A1-207ENST00000483969 SCARF2Q96GP6 870 aaPredicted RBP11.22□□□□□ -0.61
COL8A1-207ENST00000483969 KIF16BQ96L93 1317 aa11.22□□□□□ -0.61
COL8A1-207ENST00000483969 ATP6V0A2Q9Y487 856 aa11.22□□□□□ -0.61
COL8A1-207ENST00000483969 ABCC4O15439 1325 aa11.21□□□□□ -0.61
COL8A1-207ENST00000483969 LMNB1P20700 586 aa11.21□□□□□ -0.61
COL8A1-207ENST00000483969 C9orf131Q5VYM1 1079 aa11.21□□□□□ -0.61
COL8A1-207ENST00000483969 PLA2G12BQ9BX93 195 aa11.21□□□□□ -0.61
COL8A1-207ENST00000483969 TAOK3Q9H2K8 898 aa11.21□□□□□ -0.61
COL8A1-207ENST00000483969 HDAC5Q9UQL6 1122 aa11.21□□□□□ -0.61
COL8A1-207ENST00000483969 PCDHB11Q9Y5F2 797 aa11.21□□□□□ -0.61
COL8A1-207ENST00000483969 LTBP3Q9NS15 1303 aa11.2□□□□□ -0.62
COL8A1-207ENST00000483969 NFKBIEO00221 500 aa11.2□□□□□ -0.62
COL8A1-207ENST00000483969 BCAR3O75815 825 aa11.2□□□□□ -0.62
COL8A1-207ENST00000483969 CASP7P55210 303 aa11.2□□□□□ -0.62
COL8A1-207ENST00000483969 CTSWP56202 376 aa11.2□□□□□ -0.62
COL8A1-207ENST00000483969 FKBP4Q02790 459 aaKnown RBP eCLIP11.2□□□□□ -0.62
COL8A1-207ENST00000483969 RIPOR1Q6ZS17 1223 aa11.2□□□□□ -0.62
COL8A1-207ENST00000483969 SUPT20HQ8NEM7 779 aa11.2□□□□□ -0.62
COL8A1-207ENST00000483969 TTLL11Q8NHH1 800 aa11.2□□□□□ -0.62
COL8A1-207ENST00000483969 FRAT1Q92837 279 aaPredicted RBP11.2□□□□□ -0.62
COL8A1-207ENST00000483969 CDC5LQ99459 802 aaKnown RBP11.2□□□□□ -0.62
COL8A1-207ENST00000483969 RNF181Q9P0P0 153 aa11.2□□□□□ -0.62
COL8A1-207ENST00000483969 DNMT3AQ9Y6K1 912 aaPredicted RBP11.2□□□□□ -0.62
COL8A1-207ENST00000483969 KIF13BQ9NQT8 1826 aa11.19□□□□□ -0.62
COL8A1-207ENST00000483969 CSF1RP07333 972 aa11.19□□□□□ -0.62
COL8A1-207ENST00000483969 WDR44Q5JSH3 913 aa11.19□□□□□ -0.62
COL8A1-207ENST00000483969 ZKSCAN2Q63HK3 967 aa11.19□□□□□ -0.62
COL8A1-207ENST00000483969 LYPD4Q6UWN0 246 aa11.19□□□□□ -0.62
COL8A1-207ENST00000483969 ANKRD18AQ8IVF6 992 aa11.19□□□□□ -0.62
COL8A1-207ENST00000483969 MTMR14Q8NCE2 650 aa11.19□□□□□ -0.62
COL8A1-207ENST00000483969 CELF1Q92879 486 aaKnown RBP11.19□□□□□ -0.62
COL8A1-207ENST00000483969 CCDC85AQ96PX6 553 aaPredicted RBP11.19□□□□□ -0.62
COL8A1-207ENST00000483969 PSMD1Q99460 953 aa11.19□□□□□ -0.62
COL8A1-207ENST00000483969 VPS33BQ9H267 617 aa11.19□□□□□ -0.62
COL8A1-207ENST00000483969 ENAMQ9NRM1 1142 aa11.19□□□□□ -0.62
COL8A1-207ENST00000483969 GPR37L1O60883 481 aa11.18□□□□□ -0.62
COL8A1-207ENST00000483969 IRS1P35568 1242 aa11.18□□□□□ -0.62
COL8A1-207ENST00000483969 SCTRP47872 440 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms