RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 DACT2Q5SW24 774 aa16.64■□□□□ 0.25
SMAD9-204ENST00000483941 GIMAP6Q6P9H5 292 aa16.64■□□□□ 0.25
SMAD9-204ENST00000483941 CCDC129Q6ZRS4 1044 aa16.64■□□□□ 0.25
SMAD9-204ENST00000483941 ZMYM6O95789 1325 aa16.64■□□□□ 0.25
SMAD9-204ENST00000483941 DOCK2Q92608 1830 aa16.63■□□□□ 0.25
SMAD9-204ENST00000483941 SHTN1A0MZ66 631 aa16.63■□□□□ 0.25
SMAD9-204ENST00000483941 TSGA10IPQ3SY00 556 aa16.63■□□□□ 0.25
SMAD9-204ENST00000483941 HHIPL2Q6UWX4 724 aa16.63■□□□□ 0.25
SMAD9-204ENST00000483941 USP48Q86UV5 1035 aa16.63■□□□□ 0.25
SMAD9-204ENST00000483941 MICALL2Q8IY33 904 aa16.63■□□□□ 0.25
SMAD9-204ENST00000483941 KCNB2Q92953 911 aa16.63■□□□□ 0.25
SMAD9-204ENST00000483941 TEKT1Q969V4 418 aa16.63■□□□□ 0.25
SMAD9-204ENST00000483941 CNOT7Q9UIV1 285 aaKnown RBP16.63■□□□□ 0.25
SMAD9-204ENST00000483941 HDAC9Q9UKV0 1011 aa16.63■□□□□ 0.25
SMAD9-204ENST00000483941 TTF2Q9UNY4 1162 aaKnown RBP16.63■□□□□ 0.25
SMAD9-204ENST00000483941 SLC4A4Q9Y6R1 1079 aa16.63■□□□□ 0.25
SMAD9-204ENST00000483941 MROH7-TTC4A0A0A0MT08 1334 aa16.63■□□□□ 0.25
SMAD9-204ENST00000483941 MYH7P12883 1935 aa16.62■□□□□ 0.25
SMAD9-204ENST00000483941 GPR75-ASB3A0A0A6YYF3 556 aa16.62■□□□□ 0.25
SMAD9-204ENST00000483941 FAM155AB1AL88 458 aaPredicted RBP16.62■□□□□ 0.25
SMAD9-204ENST00000483941 H7C1D1 291 aa16.62■□□□□ 0.25
SMAD9-204ENST00000483941 ST18O60284 1047 aa16.62■□□□□ 0.25
SMAD9-204ENST00000483941 PRPF38BQ5VTL8 546 aaKnown RBP16.62■□□□□ 0.25
SMAD9-204ENST00000483941 CREB3L3Q68CJ9 461 aa16.62■□□□□ 0.25
SMAD9-204ENST00000483941 RGMBQ6NW40 437 aa16.62■□□□□ 0.25
SMAD9-204ENST00000483941 MIGA1Q8NAN2 632 aa16.62■□□□□ 0.25
SMAD9-204ENST00000483941 NAPBQ9H115 298 aa16.62■□□□□ 0.25
SMAD9-204ENST00000483941 ATP8A2Q9NTI2 1148 aa16.62■□□□□ 0.25
SMAD9-204ENST00000483941 DAXXQ9UER7 740 aaPredicted RBP16.62■□□□□ 0.25
SMAD9-204ENST00000483941 YDJCA8MPS7 323 aa16.61■□□□□ 0.25
SMAD9-204ENST00000483941 ZNF213O14771 459 aa16.61■□□□□ 0.25
SMAD9-204ENST00000483941 CHGBP05060 677 aa16.61■□□□□ 0.25
SMAD9-204ENST00000483941 VIL1P09327 827 aaKnown RBP16.61■□□□□ 0.25
SMAD9-204ENST00000483941 HMGB1P09429 215 aaKnown RBP16.61■□□□□ 0.25
SMAD9-204ENST00000483941 SLFNL1Q499Z3 407 aa16.61■□□□□ 0.25
SMAD9-204ENST00000483941 RSBN1LQ6PCB5 846 aaPredicted RBP16.61■□□□□ 0.25
SMAD9-204ENST00000483941 AMOTL1Q8IY63 956 aa16.61■□□□□ 0.25
SMAD9-204ENST00000483941 OGFOD1Q8N543 542 aa16.61■□□□□ 0.25
SMAD9-204ENST00000483941 AGBL3Q8NEM8 1001 aa16.61■□□□□ 0.25
SMAD9-204ENST00000483941 RIOK1Q9BRS2 568 aaKnown RBP16.61■□□□□ 0.25
SMAD9-204ENST00000483941 TM6SF1Q9BZW5 370 aa16.61■□□□□ 0.25
SMAD9-204ENST00000483941 ARMT1Q9H993 441 aa16.61■□□□□ 0.25
SMAD9-204ENST00000483941 SERPINA10Q9UK55 444 aa16.61■□□□□ 0.25
SMAD9-204ENST00000483941 SLC27A2O14975 620 aa16.6■□□□□ 0.25
SMAD9-204ENST00000483941 FGAP02671 866 aa16.6■□□□□ 0.25
SMAD9-204ENST00000483941 RPS12P25398 132 aaKnown RBP16.6■□□□□ 0.25
SMAD9-204ENST00000483941 TDO2P48775 406 aa16.6■□□□□ 0.25
SMAD9-204ENST00000483941 NT5C2P49902 561 aa16.6■□□□□ 0.25
SMAD9-204ENST00000483941 KRT26Q7Z3Y9 468 aa16.6■□□□□ 0.25
SMAD9-204ENST00000483941 IFNL3Q8IZI9 196 aa16.6■□□□□ 0.25
SMAD9-204ENST00000483941 CCDC102AQ96A19 550 aa16.6■□□□□ 0.25
SMAD9-204ENST00000483941 GBA2Q9HCG7 927 aaPredicted RBP16.6■□□□□ 0.25
SMAD9-204ENST00000483941 AATFQ9NY61 560 aaKnown RBP eCLIP16.6■□□□□ 0.25
SMAD9-204ENST00000483941 GAKO14976 1311 aa16.6■□□□□ 0.25
SMAD9-204ENST00000483941 MCM2P49736 904 aa16.59■□□□□ 0.25
SMAD9-204ENST00000483941 DLK2Q6UY11 383 aa16.59■□□□□ 0.25
SMAD9-204ENST00000483941 LCORLQ8N3X6 602 aa16.59■□□□□ 0.25
SMAD9-204ENST00000483941 C2orf69Q8N8R5 385 aa16.59■□□□□ 0.25
SMAD9-204ENST00000483941 SNX14Q9Y5W7 946 aa16.59■□□□□ 0.25
SMAD9-204ENST00000483941 MAST2Q6P0Q8 1798 aa16.59■□□□□ 0.25
SMAD9-204ENST00000483941 GSG1L2A8MUP6 293 aa16.58■□□□□ 0.24
SMAD9-204ENST00000483941 TRPA1O75762 1119 aa16.58■□□□□ 0.24
SMAD9-204ENST00000483941 SLC3A2P08195 630 aaKnown RBP16.58■□□□□ 0.24
SMAD9-204ENST00000483941 PCP11498 1178 aaKnown RBP16.58■□□□□ 0.24
SMAD9-204ENST00000483941 BTDP43251 543 aa16.58■□□□□ 0.24
SMAD9-204ENST00000483941 USP5P45974 858 aa16.58■□□□□ 0.24
SMAD9-204ENST00000483941 ZNF157P51786 506 aaPredicted RBP16.58■□□□□ 0.24
SMAD9-204ENST00000483941 KIF23Q02241 960 aaPredicted RBP16.58■□□□□ 0.24
SMAD9-204ENST00000483941 TRDNQ13061 729 aa16.58■□□□□ 0.24
SMAD9-204ENST00000483941 DIXDC1Q155Q3 683 aa16.58■□□□□ 0.24
SMAD9-204ENST00000483941 VPS53Q5VIR6 699 aa16.58■□□□□ 0.24
SMAD9-204ENST00000483941 SAMD7Q7Z3H4 446 aa16.58■□□□□ 0.24
SMAD9-204ENST00000483941 ADGRA1Q86SQ6 560 aa16.58■□□□□ 0.24
SMAD9-204ENST00000483941 CERS5Q8N5B7 392 aa16.58■□□□□ 0.24
SMAD9-204ENST00000483941 ZNF384Q8TF68 577 aa16.58■□□□□ 0.24
SMAD9-204ENST00000483941 ZDHHC15Q96MV8 337 aa16.58■□□□□ 0.24
SMAD9-204ENST00000483941 RNF186Q9NXI6 227 aa16.58■□□□□ 0.24
SMAD9-204ENST00000483941 ZBTB12Q9Y330 459 aaPredicted RBP16.58■□□□□ 0.24
SMAD9-204ENST00000483941 ADM5C9JUS6 153 aa16.57■□□□□ 0.24
SMAD9-204ENST00000483941 F8W031 263 aaPredicted RBP16.57■□□□□ 0.24
SMAD9-204ENST00000483941 PSMD14O00487 310 aa16.57■□□□□ 0.24
SMAD9-204ENST00000483941 CRKP46108 304 aa16.57■□□□□ 0.24
SMAD9-204ENST00000483941 TBC1D10BQ4KMP7 808 aaPredicted RBP16.57■□□□□ 0.24
SMAD9-204ENST00000483941 CTU1Q7Z7A3 348 aaKnown RBP16.57■□□□□ 0.24
SMAD9-204ENST00000483941 KIAA0825Q8IV33 1275 aa16.57■□□□□ 0.24
SMAD9-204ENST00000483941 DPF2Q92785 391 aa16.57■□□□□ 0.24
SMAD9-204ENST00000483941 SNX21Q969T3 373 aa16.57■□□□□ 0.24
SMAD9-204ENST00000483941 RNF41Q9H4P4 317 aaPredicted RBP16.57■□□□□ 0.24
SMAD9-204ENST00000483941 ARPP21Q9UBL0 812 aaPredicted RBP16.57■□□□□ 0.24
SMAD9-204ENST00000483941 CYP46A1Q9Y6A2 500 aa16.57■□□□□ 0.24
SMAD9-204ENST00000483941 SLC10A3P09131 477 aa16.56■□□□□ 0.24
SMAD9-204ENST00000483941 USP17L8P0C7I0 530 aa16.56■□□□□ 0.24
SMAD9-204ENST00000483941 RBM5P52756 815 aaKnown RBP eCLIP16.56■□□□□ 0.24
SMAD9-204ENST00000483941 DYNLL1P63167 89 aaKnown RBP16.56■□□□□ 0.24
SMAD9-204ENST00000483941 GRIK5Q16478 980 aa16.56■□□□□ 0.24
SMAD9-204ENST00000483941 HSCBQ8IWL3 235 aa16.56■□□□□ 0.24
SMAD9-204ENST00000483941 DCPSQ96C86 337 aaKnown RBP16.56■□□□□ 0.24
SMAD9-204ENST00000483941 KIF2CQ99661 725 aa16.56■□□□□ 0.24
SMAD9-204ENST00000483941 KCNQ5Q9NR82 932 aa16.56■□□□□ 0.24
SMAD9-204ENST00000483941 DAGLAQ9Y4D2 1042 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms