RNA–Protein interactions for RNA: ENST00000483738.1

UBIAD1-203, Transcript of UbiA prenyltransferase domain containing 1, human

TSL 3

Gene UBIAD1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBIAD1-203	ENST00000483738	TRIM47	Q96LD4	638 aa		13.28	□□□□□ -0.28
UBIAD1-203	ENST00000483738	FAM198A	Q9UFP1	575 aa		13.28	□□□□□ -0.28
UBIAD1-203	ENST00000483738	KCNH4	Q9UQ05	1017 aa		13.28	□□□□□ -0.28
UBIAD1-203	ENST00000483738	PDS5A	Q29RF7	1337 aa	Known RBP	13.28	□□□□□ -0.28
UBIAD1-203	ENST00000483738	GNAI2	P04899	355 aa		13.27	□□□□□ -0.29
UBIAD1-203	ENST00000483738	TIMM10	P62072	90 aa		13.27	□□□□□ -0.29
UBIAD1-203	ENST00000483738	UBXN2A	P68543	259 aa		13.27	□□□□□ -0.29
UBIAD1-203	ENST00000483738	TFCP2	Q12800	502 aa		13.27	□□□□□ -0.29
UBIAD1-203	ENST00000483738	OS9	Q13438	667 aa	Predicted RBP	13.27	□□□□□ -0.29
UBIAD1-203	ENST00000483738	RASGRF1	Q13972	1273 aa		13.27	□□□□□ -0.29
UBIAD1-203	ENST00000483738	TRMT2A	Q8IZ69	625 aa	Known RBP	13.27	□□□□□ -0.29
UBIAD1-203	ENST00000483738	NKX2-3	Q8TAU0	364 aa		13.27	□□□□□ -0.29
UBIAD1-203	ENST00000483738	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.27	□□□□□ -0.29
UBIAD1-203	ENST00000483738	XAGE2	Q96GT9	111 aa		13.27	□□□□□ -0.29
UBIAD1-203	ENST00000483738	IDI2	Q9BXS1	227 aa		13.27	□□□□□ -0.29
UBIAD1-203	ENST00000483738	ARHGAP39	Q9C0H5	1083 aa		13.27	□□□□□ -0.29
UBIAD1-203	ENST00000483738	RAI14	Q9P0K7	980 aa		13.27	□□□□□ -0.29
UBIAD1-203	ENST00000483738	ZHX2	Q9Y6X8	837 aa		13.27	□□□□□ -0.29
UBIAD1-203	ENST00000483738	MROH7-TTC4	A0A0A0MT08	1334 aa		13.27	□□□□□ -0.29
UBIAD1-203	ENST00000483738	MYPN	Q86TC9	1320 aa		13.27	□□□□□ -0.29
UBIAD1-203	ENST00000483738	C17orf99	Q6UX52	265 aa		13.26	□□□□□ -0.29
UBIAD1-203	ENST00000483738	SRRD	Q9UH36	339 aa		13.26	□□□□□ -0.29
UBIAD1-203	ENST00000483738	GAK	O14976	1311 aa		13.26	□□□□□ -0.29
UBIAD1-203	ENST00000483738	CTNND1	O60716	968 aa	Known RBP	13.25	□□□□□ -0.29
UBIAD1-203	ENST00000483738	MAP4K4	O95819	1239 aa	Predicted RBP	13.25	□□□□□ -0.29
UBIAD1-203	ENST00000483738	UQCRFS1P1	P0C7P4	283 aa		13.25	□□□□□ -0.29
UBIAD1-203	ENST00000483738	GRK4	P32298	578 aa		13.25	□□□□□ -0.29
UBIAD1-203	ENST00000483738	TRIM34	Q9BYJ4	488 aa		13.25	□□□□□ -0.29
UBIAD1-203	ENST00000483738	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
UBIAD1-203	ENST00000483738	LRP2BP	Q9P2M1	347 aa		13.25	□□□□□ -0.29
UBIAD1-203	ENST00000483738	PNMA3	Q9UL41	463 aa		13.25	□□□□□ -0.29
UBIAD1-203	ENST00000483738	ZBTB22	O15209	634 aa		13.24	□□□□□ -0.29
UBIAD1-203	ENST00000483738	PTPRF	P10586	1907 aa		13.24	□□□□□ -0.29
UBIAD1-203	ENST00000483738	OSBP	P22059	807 aa		13.24	□□□□□ -0.29
UBIAD1-203	ENST00000483738	MECOM	Q03112	1051 aa		13.24	□□□□□ -0.29
UBIAD1-203	ENST00000483738	ATF7IP	Q6VMQ6	1270 aa		13.24	□□□□□ -0.29
UBIAD1-203	ENST00000483738	SPATA5	Q8NB90	893 aa		13.24	□□□□□ -0.29
UBIAD1-203	ENST00000483738	FAM163A	Q96GL9	167 aa	Predicted RBP	13.24	□□□□□ -0.29
UBIAD1-203	ENST00000483738	ATAD5	Q96QE3	1844 aa		13.24	□□□□□ -0.29
UBIAD1-203	ENST00000483738		A0A0G2JLL6	359 aa	Predicted RBP	13.23	□□□□□ -0.29
UBIAD1-203	ENST00000483738	TRIM75P	A6NK02	468 aa		13.23	□□□□□ -0.29
UBIAD1-203	ENST00000483738	BAG3	O95817	575 aa		13.23	□□□□□ -0.29
UBIAD1-203	ENST00000483738	PTPRA	P18433	802 aa		13.23	□□□□□ -0.29
UBIAD1-203	ENST00000483738	CAP1	Q01518	475 aa		13.23	□□□□□ -0.29
UBIAD1-203	ENST00000483738	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.23	□□□□□ -0.29	2e-6	■■■□□ 17
UBIAD1-203	ENST00000483738	MTX1	Q13505	466 aa		13.23	□□□□□ -0.29
UBIAD1-203	ENST00000483738	CCDC158	Q5M9N0	1113 aa		13.23	□□□□□ -0.29
UBIAD1-203	ENST00000483738	TTC39A	Q5SRH9	613 aa		13.23	□□□□□ -0.29
UBIAD1-203	ENST00000483738	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.23	□□□□□ -0.29
UBIAD1-203	ENST00000483738	ZFPM1	Q8IX07	1006 aa		13.23	□□□□□ -0.29
UBIAD1-203	ENST00000483738	FTSJ3	Q8IY81	847 aa	Known RBP	13.23	□□□□□ -0.29
UBIAD1-203	ENST00000483738	SLAIN1	Q8ND83	568 aa		13.23	□□□□□ -0.29
UBIAD1-203	ENST00000483738	CLUAP1	Q96AJ1	413 aa		13.23	□□□□□ -0.29
UBIAD1-203	ENST00000483738	TBC1D2	Q9BYX2	928 aa		13.23	□□□□□ -0.29
UBIAD1-203	ENST00000483738	TNPO2	O14787	897 aa	Known RBP	13.22	□□□□□ -0.29
UBIAD1-203	ENST00000483738	CYP2C8	P10632	490 aa		13.22	□□□□□ -0.29
UBIAD1-203	ENST00000483738	PLCG2	P16885	1265 aa		13.22	□□□□□ -0.29
UBIAD1-203	ENST00000483738	HABP4	Q5JVS0	413 aa	Known RBP	13.22	□□□□□ -0.29
UBIAD1-203	ENST00000483738	TEX11	Q8IYF3	940 aa		13.22	□□□□□ -0.29
UBIAD1-203	ENST00000483738	DPF3	Q92784	378 aa		13.22	□□□□□ -0.29
UBIAD1-203	ENST00000483738	COA7	Q96BR5	231 aa		13.22	□□□□□ -0.29
UBIAD1-203	ENST00000483738	HTATIP2	Q9BUP3	242 aa		13.22	□□□□□ -0.29
UBIAD1-203	ENST00000483738	RNF208	Q9H0X6	261 aa		13.22	□□□□□ -0.29
UBIAD1-203	ENST00000483738	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.22	□□□□□ -0.29
UBIAD1-203	ENST00000483738	TAOK2	Q9UL54	1235 aa		13.22	□□□□□ -0.29
UBIAD1-203	ENST00000483738	SLC45A1	Q9Y2W3	748 aa		13.22	□□□□□ -0.29
UBIAD1-203	ENST00000483738	MAST2	Q6P0Q8	1798 aa		13.21	□□□□□ -0.29
UBIAD1-203	ENST00000483738	GPR75-ASB3	A0A0A6YYF3	556 aa		13.21	□□□□□ -0.29
UBIAD1-203	ENST00000483738	DDTL	A6NHG4	134 aa	Predicted RBP	13.21	□□□□□ -0.29
UBIAD1-203	ENST00000483738	PHF20L1	A8MW92	1017 aa		13.21	□□□□□ -0.29
UBIAD1-203	ENST00000483738	TRIM27	P14373	513 aa		13.21	□□□□□ -0.29
UBIAD1-203	ENST00000483738	ZKSCAN2	Q63HK3	967 aa		13.21	□□□□□ -0.29
UBIAD1-203	ENST00000483738	AS3MT	Q9HBK9	375 aa		13.21	□□□□□ -0.29
UBIAD1-203	ENST00000483738	HMG20B	Q9P0W2	317 aa		13.21	□□□□□ -0.29
UBIAD1-203	ENST00000483738	AFG3L2	Q9Y4W6	797 aa		13.21	□□□□□ -0.29
UBIAD1-203	ENST00000483738	PHIP	Q8WWQ0	1821 aa		13.21	□□□□□ -0.29
UBIAD1-203	ENST00000483738	ADGRA2	Q96PE1	1338 aa		13.21	□□□□□ -0.3
UBIAD1-203	ENST00000483738	TBC1D12	O60347	775 aa		13.2	□□□□□ -0.3
UBIAD1-203	ENST00000483738	NPM3	O75607	178 aa	Known RBP	13.2	□□□□□ -0.3
UBIAD1-203	ENST00000483738	CCL5	P13501	91 aa		13.2	□□□□□ -0.3
UBIAD1-203	ENST00000483738	ARID4A	P29374	1257 aa	Predicted RBP	13.2	□□□□□ -0.3
UBIAD1-203	ENST00000483738	PRKCZ	Q05513	592 aa		13.2	□□□□□ -0.3
UBIAD1-203	ENST00000483738	NAA16	Q6N069	864 aa	Predicted RBP	13.2	□□□□□ -0.3
UBIAD1-203	ENST00000483738	GPAT2	Q6NUI2	795 aa		13.2	□□□□□ -0.3
UBIAD1-203	ENST00000483738	DDX4	Q9NQI0	724 aa	Known RBP	13.2	□□□□□ -0.3
UBIAD1-203	ENST00000483738	AGTPBP1	Q9UPW5	1226 aa		13.2	□□□□□ -0.3
UBIAD1-203	ENST00000483738	RFX7	Q2KHR2	1363 aa		13.2	□□□□□ -0.3
UBIAD1-203	ENST00000483738	ADCY3	O60266	1144 aa		13.2	□□□□□ -0.3
UBIAD1-203	ENST00000483738	BCR	P11274	1271 aa		13.2	□□□□□ -0.3
UBIAD1-203	ENST00000483738	MTFR1	Q15390	333 aa		13.2	□□□□□ -0.3
UBIAD1-203	ENST00000483738	SH3BP5L	Q7L8J4	393 aa		13.2	□□□□□ -0.3
UBIAD1-203	ENST00000483738	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.2	□□□□□ -0.3
UBIAD1-203	ENST00000483738	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.2	□□□□□ -0.3
UBIAD1-203	ENST00000483738	NSUN4	Q96CB9	384 aa	Known RBP	13.2	□□□□□ -0.3
UBIAD1-203	ENST00000483738	DHX36	Q9H2U1	1008 aa	Known RBP	13.2	□□□□□ -0.3
UBIAD1-203	ENST00000483738	HERC5	Q9UII4	1024 aa	Known RBP	13.2	□□□□□ -0.3
UBIAD1-203	ENST00000483738	COL2A1	P02458	1487 aa	Predicted RBP	13.19	□□□□□ -0.3
UBIAD1-203	ENST00000483738	ATRNL1	Q5VV63	1379 aa		13.19	□□□□□ -0.3
UBIAD1-203	ENST00000483738	BCAR3	O75815	825 aa		13.19	□□□□□ -0.3
UBIAD1-203	ENST00000483738	HLA-DOA	P06340	250 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms