RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 AOC3Q16853 763 aa8.3□□□□□ -1.08
COMMD3-213ENST00000483684 FBLN7Q53RD9 439 aa8.3□□□□□ -1.08
COMMD3-213ENST00000483684 PDZD3Q86UT5 571 aa8.3□□□□□ -1.08
COMMD3-213ENST00000483684 PI4K2BQ8TCG2 481 aa8.3□□□□□ -1.08
COMMD3-213ENST00000483684 HRASLS5Q96KN8 279 aa8.3□□□□□ -1.08
COMMD3-213ENST00000483684 CITED4Q96RK1 184 aa8.3□□□□□ -1.08
COMMD3-213ENST00000483684 TNKS2Q9H2K2 1166 aa8.3□□□□□ -1.08
COMMD3-213ENST00000483684 NDUFB5O43674 189 aa8.29□□□□□ -1.08
COMMD3-213ENST00000483684 NEFMP07197 916 aa8.29□□□□□ -1.08
COMMD3-213ENST00000483684 SERPINB4P48594 390 aa8.29□□□□□ -1.08
COMMD3-213ENST00000483684 GRM2Q14416 872 aa8.29□□□□□ -1.08
COMMD3-213ENST00000483684 GLYCTKQ8IVS8 523 aa8.29□□□□□ -1.08
COMMD3-213ENST00000483684 KRTAP17-1Q9BYP8 105 aa8.29□□□□□ -1.08
COMMD3-213ENST00000483684 TRAK1Q9UPV9 953 aa8.29□□□□□ -1.08
COMMD3-213ENST00000483684 EIF1AYO14602 144 aaKnown RBP8.28□□□□□ -1.08
COMMD3-213ENST00000483684 GPR182O15218 404 aa8.28□□□□□ -1.08
COMMD3-213ENST00000483684 HCLS1P14317 486 aaPredicted RBP8.28□□□□□ -1.08
COMMD3-213ENST00000483684 ARID3AQ99856 593 aa8.28□□□□□ -1.08
COMMD3-213ENST00000483684 TMEM265A0A087WTH1 108 aa8.27□□□□□ -1.09
COMMD3-213ENST00000483684 RNGTTO60942 597 aaKnown RBP8.27□□□□□ -1.09
COMMD3-213ENST00000483684 MESP2Q0VG99 397 aa8.27□□□□□ -1.09
COMMD3-213ENST00000483684 FAM214BQ7L5A3 538 aa8.27□□□□□ -1.09
COMMD3-213ENST00000483684 FLAD1Q8NFF5 587 aa8.27□□□□□ -1.09
COMMD3-213ENST00000483684 GADD45BO75293 160 aaPredicted RBP8.26□□□□□ -1.09
COMMD3-213ENST00000483684 HNRNPUQ00839 825 aaKnown RBP eCLIP8.26□□□□□ -1.09
COMMD3-213ENST00000483684 SLC23A3Q6PIS1 610 aa8.26□□□□□ -1.09
COMMD3-213ENST00000483684 SNX11Q9Y5W9 270 aa8.26□□□□□ -1.09
COMMD3-213ENST00000483684 ZC3H12AQ5D1E8 599 aaKnown RBP8.25□□□□□ -1.09
COMMD3-213ENST00000483684 ANGEL2Q5VTE6 544 aaKnown RBP8.25□□□□□ -1.09
COMMD3-213ENST00000483684 STK35Q8TDR2 534 aa8.25□□□□□ -1.09
COMMD3-213ENST00000483684 ISL2Q96A47 359 aa8.25□□□□□ -1.09
COMMD3-213ENST00000483684 HEXIM2Q96MH2 286 aaKnown RBP8.25□□□□□ -1.09
COMMD3-213ENST00000483684 NIF3L1Q9GZT8 377 aa8.25□□□□□ -1.09
COMMD3-213ENST00000483684 TMEM39AQ9NV64 488 aa8.25□□□□□ -1.09
COMMD3-213ENST00000483684 ARHGAP27Q6ZUM4 889 aa8.24□□□□□ -1.09
COMMD3-213ENST00000483684 KSR1Q8IVT5 923 aa8.24□□□□□ -1.09
COMMD3-213ENST00000483684 TOP6BLQ8N6T0 577 aa8.24□□□□□ -1.09
COMMD3-213ENST00000483684 RNF214Q8ND24 703 aa8.24□□□□□ -1.09
COMMD3-213ENST00000483684 BHLHE22Q8NFJ8 381 aaPredicted RBP8.24□□□□□ -1.09
COMMD3-213ENST00000483684 EPS8L3Q8TE67 593 aaKnown RBP8.24□□□□□ -1.09
COMMD3-213ENST00000483684 ALKBH8Q96BT7 664 aaKnown RBP8.24□□□□□ -1.09
COMMD3-213ENST00000483684 CSRNP1Q96S65 589 aa8.24□□□□□ -1.09
COMMD3-213ENST00000483684 CACNA2D2Q9NY47 1150 aa8.24□□□□□ -1.09
COMMD3-213ENST00000483684 USTQ9Y2C2 406 aa8.24□□□□□ -1.09
COMMD3-213ENST00000483684 ERVK-24P63145 666 aa8.23□□□□□ -1.09
COMMD3-213ENST00000483684 PPP2R3AQ06190 1150 aa8.23□□□□□ -1.09
COMMD3-213ENST00000483684 PKN1Q16512 942 aa8.23□□□□□ -1.09
COMMD3-213ENST00000483684 B4GALNT3Q6L9W6 998 aa8.23□□□□□ -1.09
COMMD3-213ENST00000483684 CILP2Q8IUL8 1156 aa8.23□□□□□ -1.09
COMMD3-213ENST00000483684 KCNB2Q92953 911 aa8.23□□□□□ -1.09
COMMD3-213ENST00000483684 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.23□□□□□ -1.09
COMMD3-213ENST00000483684 GPN3Q9UHW5 284 aaPredicted RBP8.23□□□□□ -1.09
COMMD3-213ENST00000483684 DTHD1Q6ZMT9 781 aa8.22□□□□□ -1.09
COMMD3-213ENST00000483684 FAM84AQ96KN4 292 aa8.22□□□□□ -1.09
COMMD3-213ENST00000483684 SLC38A3Q99624 504 aa8.22□□□□□ -1.09
COMMD3-213ENST00000483684 ZNF503-AS2A6NEH8 195 aa8.21□□□□□ -1.1
COMMD3-213ENST00000483684 IGF2BP3O00425 579 aaKnown RBP eCLIP8.21□□□□□ -1.1
COMMD3-213ENST00000483684 ITIH2P19823 946 aa8.21□□□□□ -1.1
COMMD3-213ENST00000483684 FCGRTP55899 365 aa8.21□□□□□ -1.1
COMMD3-213ENST00000483684 KRTAP19-4Q3LI73 84 aa8.21□□□□□ -1.1
COMMD3-213ENST00000483684 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.21□□□□□ -1.1
COMMD3-213ENST00000483684 SULF2Q8IWU5 870 aa8.21□□□□□ -1.1
COMMD3-213ENST00000483684 PRDM7Q9NQW5 492 aa8.21□□□□□ -1.1
COMMD3-213ENST00000483684 XRCC5P13010 732 aaKnown RBP8.2□□□□□ -1.1
COMMD3-213ENST00000483684 ARNTP27540 789 aa8.2□□□□□ -1.1
COMMD3-213ENST00000483684 NTF4P34130 210 aa8.2□□□□□ -1.1
COMMD3-213ENST00000483684 ZNF252P-AS1Q0IIN9 211 aa8.2□□□□□ -1.1
COMMD3-213ENST00000483684 ZSWIM9Q86XI8 627 aa8.2□□□□□ -1.1
COMMD3-213ENST00000483684 SPACA3Q8IXA5 215 aa8.2□□□□□ -1.1
COMMD3-213ENST00000483684 ASB11Q8WXH4 323 aa8.2□□□□□ -1.1
COMMD3-213ENST00000483684 DMRTB1Q96MA1 342 aa8.2□□□□□ -1.1
COMMD3-213ENST00000483684 LRRC10BA6NIK2 292 aa8.19□□□□□ -1.1
COMMD3-213ENST00000483684 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.19□□□□□ -1.1
COMMD3-213ENST00000483684 NME2P22392 152 aa8.19□□□□□ -1.1
COMMD3-213ENST00000483684 TXNDC2Q86VQ3 553 aa8.19□□□□□ -1.1
COMMD3-213ENST00000483684 GPBAR1Q8TDU6 330 aa8.19□□□□□ -1.1
COMMD3-213ENST00000483684 RBCK1Q9BYM8 510 aa8.19□□□□□ -1.1
COMMD3-213ENST00000483684 SSU72Q9NP77 194 aaKnown RBP8.19□□□□□ -1.1
COMMD3-213ENST00000483684 KRTAP9-7A8MTY7 169 aa8.18□□□□□ -1.1
COMMD3-213ENST00000483684 NKPD1Q17RQ9 610 aa8.18□□□□□ -1.1
COMMD3-213ENST00000483684 MAP1SQ66K74 1059 aaPredicted RBP8.18□□□□□ -1.1
COMMD3-213ENST00000483684 PI16Q6UXB8 463 aa8.18□□□□□ -1.1
COMMD3-213ENST00000483684 FAM53CQ9NYF3 392 aa8.18□□□□□ -1.1
COMMD3-213ENST00000483684 GTF2IRD1Q9UHL9 959 aa8.18□□□□□ -1.1
COMMD3-213ENST00000483684 CTNND2Q9UQB3 1225 aa8.18□□□□□ -1.1
COMMD3-213ENST00000483684 ZP2Q05996 745 aa8.17□□□□□ -1.1
COMMD3-213ENST00000483684 RING1Q06587 406 aa8.17□□□□□ -1.1
COMMD3-213ENST00000483684 TMC1Q8TDI8 760 aa8.17□□□□□ -1.1
COMMD3-213ENST00000483684 EMILIN2Q9BXX0 1053 aa8.17□□□□□ -1.1
COMMD3-213ENST00000483684 BCO2Q9BYV7 579 aa8.17□□□□□ -1.1
COMMD3-213ENST00000483684 PRDM10Q9NQV6 1147 aa8.17□□□□□ -1.1
COMMD3-213ENST00000483684 PPP4R2Q9NY27 417 aa8.17□□□□□ -1.1
COMMD3-213ENST00000483684 KCNMB1Q16558 191 aa8.16□□□□□ -1.1
COMMD3-213ENST00000483684 PITPNM2Q9BZ72 1349 aa8.15□□□□□ -1.1
COMMD3-213ENST00000483684 IKZF1Q13422 519 aa8.15□□□□□ -1.1
COMMD3-213ENST00000483684 MLANAQ16655 118 aa8.15□□□□□ -1.1
COMMD3-213ENST00000483684 PPM1JQ5JR12 505 aa8.15□□□□□ -1.1
COMMD3-213ENST00000483684 MPRIPQ6WCQ1 1025 aa8.15□□□□□ -1.1
COMMD3-213ENST00000483684 UBE3DQ7Z6J8 389 aa8.15□□□□□ -1.1
COMMD3-213ENST00000483684 NLRP2Q9NX02 1062 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms