RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 ZNF765Q7L2R6 523 aa6.9□□□□□ -1.3
NSMCE4A-210ENST00000483541 SMYD4Q8IYR2 804 aaPredicted RBP6.9□□□□□ -1.3
NSMCE4A-210ENST00000483541 FRMD6Q96NE9 622 aa6.9□□□□□ -1.3
NSMCE4A-210ENST00000483541 OSBPL7Q9BZF2 842 aa6.9□□□□□ -1.3
NSMCE4A-210ENST00000483541 CACNA2D2Q9NY47 1150 aa6.9□□□□□ -1.3
NSMCE4A-210ENST00000483541 CCDC39Q9UFE4 941 aa6.9□□□□□ -1.3
NSMCE4A-210ENST00000483541 ANGEL1Q9UNK9 670 aaKnown RBP6.9□□□□□ -1.3
NSMCE4A-210ENST00000483541 ZC3H12AQ5D1E8 599 aaKnown RBP6.89□□□□□ -1.31
NSMCE4A-210ENST00000483541 VSIG10LQ86VR7 867 aa6.89□□□□□ -1.31
NSMCE4A-210ENST00000483541 STK35Q8TDR2 534 aa6.89□□□□□ -1.31
NSMCE4A-210ENST00000483541 FBXL18Q96ME1 805 aa6.89□□□□□ -1.31
NSMCE4A-210ENST00000483541 SPG7Q9UQ90 795 aa6.89□□□□□ -1.31
NSMCE4A-210ENST00000483541 ERVK-24P63145 666 aa6.88□□□□□ -1.31
NSMCE4A-210ENST00000483541 PCOLCE2Q9UKZ9 415 aa6.88□□□□□ -1.31
NSMCE4A-210ENST00000483541 RNF114Q9Y508 228 aa6.88□□□□□ -1.31
NSMCE4A-210ENST00000483541 ENC1O14682 589 aa6.87□□□□□ -1.31
NSMCE4A-210ENST00000483541 BMP6P22004 513 aa6.87□□□□□ -1.31
NSMCE4A-210ENST00000483541 TTLL4Q14679 1199 aa6.87□□□□□ -1.31
NSMCE4A-210ENST00000483541 COL19A1Q14993 1142 aa6.87□□□□□ -1.31
NSMCE4A-210ENST00000483541 MAP1SQ66K74 1059 aaPredicted RBP6.87□□□□□ -1.31
NSMCE4A-210ENST00000483541 RNF214Q8ND24 703 aa6.87□□□□□ -1.31
NSMCE4A-210ENST00000483541 FAM8A1Q9UBU6 413 aa6.87□□□□□ -1.31
NSMCE4A-210ENST00000483541 WWC3Q9ULE0 1092 aa6.87□□□□□ -1.31
NSMCE4A-210ENST00000483541 TRIM37O94972 964 aa6.86□□□□□ -1.31
NSMCE4A-210ENST00000483541 FGD1P98174 961 aa6.86□□□□□ -1.31
NSMCE4A-210ENST00000483541 LRRC14Q15048 493 aa6.86□□□□□ -1.31
NSMCE4A-210ENST00000483541 TPTE2Q6XPS3 522 aa6.86□□□□□ -1.31
NSMCE4A-210ENST00000483541 GPBAR1Q8TDU6 330 aa6.86□□□□□ -1.31
NSMCE4A-210ENST00000483541 C12orf49Q9H741 205 aa6.86□□□□□ -1.31
NSMCE4A-210ENST00000483541 LGR6Q9HBX8 967 aa6.86□□□□□ -1.31
NSMCE4A-210ENST00000483541 CBX8Q9HC52 389 aa6.86□□□□□ -1.31
NSMCE4A-210ENST00000483541 LRRC4CQ9HCJ2 640 aa6.86□□□□□ -1.31
NSMCE4A-210ENST00000483541 ZC3H7BQ9UGR2 993 aaKnown RBP6.86□□□□□ -1.31
NSMCE4A-210ENST00000483541 ADGRE2Q9UHX3 823 aa6.86□□□□□ -1.31
NSMCE4A-210ENST00000483541 RNGTTO60942 597 aaKnown RBP6.85□□□□□ -1.31
NSMCE4A-210ENST00000483541 P4HBP07237 508 aaKnown RBP6.85□□□□□ -1.31
NSMCE4A-210ENST00000483541 SETDB2Q96T68 719 aa6.85□□□□□ -1.31
NSMCE4A-210ENST00000483541 CYP8B1Q9UNU6 501 aa6.85□□□□□ -1.31
NSMCE4A-210ENST00000483541 LDHBP07195 334 aaKnown RBP6.84□□□□□ -1.31
NSMCE4A-210ENST00000483541 FAM87AP0C7U9 286 aa6.84□□□□□ -1.31
NSMCE4A-210ENST00000483541 HCLS1P14317 486 aaPredicted RBP6.84□□□□□ -1.31
NSMCE4A-210ENST00000483541 CDK5R2Q13319 367 aa6.84□□□□□ -1.31
NSMCE4A-210ENST00000483541 NFXL1Q6ZNB6 911 aa6.84□□□□□ -1.31
NSMCE4A-210ENST00000483541 ABI1Q8IZP0 508 aa6.84□□□□□ -1.31
NSMCE4A-210ENST00000483541 STK11IPQ8N1F8 1099 aa6.84□□□□□ -1.31
NSMCE4A-210ENST00000483541 AGBL5Q8NDL9 886 aa6.84□□□□□ -1.31
NSMCE4A-210ENST00000483541 ACSBG1Q96GR2 724 aa6.84□□□□□ -1.31
NSMCE4A-210ENST00000483541 KRTAP4-2Q9BYR5 136 aa6.84□□□□□ -1.31
NSMCE4A-210ENST00000483541 MKNK2Q9HBH9 465 aa6.84□□□□□ -1.31
NSMCE4A-210ENST00000483541 PAGE1O75459 146 aa6.83□□□□□ -1.32
NSMCE4A-210ENST00000483541 NEFMP07197 916 aa6.83□□□□□ -1.32
NSMCE4A-210ENST00000483541 RING1Q06587 406 aa6.83□□□□□ -1.32
NSMCE4A-210ENST00000483541 LLGL2Q6P1M3 1020 aa6.83□□□□□ -1.32
NSMCE4A-210ENST00000483541 SV2BQ7L1I2 683 aa6.83□□□□□ -1.32
NSMCE4A-210ENST00000483541 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.83□□□□□ -1.32
NSMCE4A-210ENST00000483541 TP53INP2Q8IXH6 220 aa6.83□□□□□ -1.32
NSMCE4A-210ENST00000483541 GRIN3AQ8TCU5 1115 aa6.83□□□□□ -1.32
NSMCE4A-210ENST00000483541 ISL2Q96A47 359 aa6.83□□□□□ -1.32
NSMCE4A-210ENST00000483541 MISP3Q96FF7 219 aa6.83□□□□□ -1.32
NSMCE4A-210ENST00000483541 SSU72Q9NP77 194 aaKnown RBP6.83□□□□□ -1.32
NSMCE4A-210ENST00000483541 FANCGO15287 622 aa6.82□□□□□ -1.32
NSMCE4A-210ENST00000483541 PRPF40AO75400 957 aaKnown RBP6.82□□□□□ -1.32
NSMCE4A-210ENST00000483541 USP17L7P0C7H9 530 aa6.82□□□□□ -1.32
NSMCE4A-210ENST00000483541 GNA15P30679 374 aa6.82□□□□□ -1.32
NSMCE4A-210ENST00000483541 DUSP23Q9BVJ7 150 aa6.82□□□□□ -1.32
NSMCE4A-210ENST00000483541 SLC5A6Q9Y289 635 aa6.82□□□□□ -1.32
NSMCE4A-210ENST00000483541 FBXO24O75426 580 aa6.81□□□□□ -1.32
NSMCE4A-210ENST00000483541 MPRIPQ6WCQ1 1025 aa6.81□□□□□ -1.32
NSMCE4A-210ENST00000483541 CBLL1Q75N03 491 aa6.81□□□□□ -1.32
NSMCE4A-210ENST00000483541 SND1Q7KZF4 910 aaKnown RBP eCLIP6.81□□□□□ -1.32
NSMCE4A-210ENST00000483541 FLCNQ8NFG4 579 aa6.81□□□□□ -1.32
NSMCE4A-210ENST00000483541 NETO1Q8TDF5 533 aa6.81□□□□□ -1.32
NSMCE4A-210ENST00000483541 BCL7CQ8WUZ0 217 aaPredicted RBP6.81□□□□□ -1.32
NSMCE4A-210ENST00000483541 PAK6Q9NQU5 681 aaPredicted RBP6.81□□□□□ -1.32
NSMCE4A-210ENST00000483541 EIF4BP23588 611 aaKnown RBP6.8□□□□□ -1.32
NSMCE4A-210ENST00000483541 NTF4P34130 210 aa6.8□□□□□ -1.32
NSMCE4A-210ENST00000483541 PCNX4Q63HM2 1172 aa6.8□□□□□ -1.32
NSMCE4A-210ENST00000483541 KCT2Q8NC54 265 aa6.8□□□□□ -1.32
NSMCE4A-210ENST00000483541 AK5Q9Y6K8 562 aa6.8□□□□□ -1.32
NSMCE4A-210ENST00000483541 PPM1JQ5JR12 505 aa6.79□□□□□ -1.32
NSMCE4A-210ENST00000483541 ZBTB37Q5TC79 503 aa6.79□□□□□ -1.32
NSMCE4A-210ENST00000483541 VAV3Q9UKW4 847 aa6.79□□□□□ -1.32
NSMCE4A-210ENST00000483541 PCDHA4Q9UN74 947 aa6.79□□□□□ -1.32
NSMCE4A-210ENST00000483541 ANKRD33BA6NCL7 494 aa6.78□□□□□ -1.32
NSMCE4A-210ENST00000483541 IGF2BP3O00425 579 aaKnown RBP eCLIP6.78□□□□□ -1.32
NSMCE4A-210ENST00000483541 LEFTY1O75610 366 aa6.78□□□□□ -1.32
NSMCE4A-210ENST00000483541 CELA3AP09093 270 aa6.78□□□□□ -1.32
NSMCE4A-210ENST00000483541 PDIA4P13667 645 aaKnown RBP6.78□□□□□ -1.32
NSMCE4A-210ENST00000483541 JAG1P78504 1218 aa6.78□□□□□ -1.32
NSMCE4A-210ENST00000483541 PRKCQQ04759 706 aa6.78□□□□□ -1.32
NSMCE4A-210ENST00000483541 EAPPQ56P03 285 aaPredicted RBP6.78□□□□□ -1.32
NSMCE4A-210ENST00000483541 RASIP1Q5U651 963 aa6.78□□□□□ -1.32
NSMCE4A-210ENST00000483541 CDC37L1Q7L3B6 337 aa6.78□□□□□ -1.32
NSMCE4A-210ENST00000483541 C12orf40Q86WS4 652 aa6.78□□□□□ -1.32
NSMCE4A-210ENST00000483541 PICK1Q9NRD5 415 aa6.78□□□□□ -1.32
NSMCE4A-210ENST00000483541 DCDC2CA8MYV0 355 aa6.77□□□□□ -1.33
NSMCE4A-210ENST00000483541 OXCT1P55809 520 aa6.77□□□□□ -1.33
NSMCE4A-210ENST00000483541 RPS26P62854 115 aaKnown RBP6.77□□□□□ -1.33
NSMCE4A-210ENST00000483541 IFI16Q16666 785 aaKnown RBP6.77□□□□□ -1.33
NSMCE4A-210ENST00000483541 FAM214BQ7L5A3 538 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms