RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 CTSBP07858 339 aa5.74□□□□□ -1.49
LRCH3-217ENST00000483442 PCSK2P16519 638 aa5.74□□□□□ -1.49
LRCH3-217ENST00000483442 MAP4P27816 1152 aaKnown RBP5.74□□□□□ -1.49
LRCH3-217ENST00000483442 ZNF211Q13398 564 aaPredicted RBP5.74□□□□□ -1.49
LRCH3-217ENST00000483442 CDPF1Q6NVV7 123 aa5.74□□□□□ -1.49
LRCH3-217ENST00000483442 USP26Q9BXU7 913 aa5.74□□□□□ -1.49
LRCH3-217ENST00000483442 BHLHE41Q9C0J9 482 aaPredicted RBP5.74□□□□□ -1.49
LRCH3-217ENST00000483442 NRSN2Q9GZP1 204 aa5.74□□□□□ -1.49
LRCH3-217ENST00000483442 GOLGA2P5Q9HBQ8 144 aa5.74□□□□□ -1.49
LRCH3-217ENST00000483442 ZFYVE28Q9HCC9 887 aa5.74□□□□□ -1.49
LRCH3-217ENST00000483442 MED14O60244 1454 aa5.74□□□□□ -1.49
LRCH3-217ENST00000483442 SAMD9LQ8IVG5 1584 aa5.74□□□□□ -1.49
LRCH3-217ENST00000483442 DHX29Q7Z478 1369 aaKnown RBP5.73□□□□□ -1.49
LRCH3-217ENST00000483442 ADMP35318 185 aa5.73□□□□□ -1.49
LRCH3-217ENST00000483442 ARL4DP49703 201 aa5.73□□□□□ -1.49
LRCH3-217ENST00000483442 IRAK1P51617 712 aa5.73□□□□□ -1.49
LRCH3-217ENST00000483442 AAMPQ13685 434 aa5.73□□□□□ -1.49
LRCH3-217ENST00000483442 ECM1Q16610 540 aa5.73□□□□□ -1.49
LRCH3-217ENST00000483442 INTS5Q6P9B9 1019 aaKnown RBP5.73□□□□□ -1.49
LRCH3-217ENST00000483442 GJD3Q8N144 294 aa5.73□□□□□ -1.49
LRCH3-217ENST00000483442 FBXL6Q8N531 539 aa5.73□□□□□ -1.49
LRCH3-217ENST00000483442 C12orf50Q8NA57 414 aaPredicted RBP5.73□□□□□ -1.49
LRCH3-217ENST00000483442 SMG8Q8ND04 991 aaKnown RBP5.73□□□□□ -1.49
LRCH3-217ENST00000483442 SNX29Q8TEQ0 813 aa5.73□□□□□ -1.49
LRCH3-217ENST00000483442 UGGT1Q9NYU2 1555 aa5.72□□□□□ -1.49
LRCH3-217ENST00000483442 SETD1AO15047 1707 aaKnown RBP5.72□□□□□ -1.49
LRCH3-217ENST00000483442 GAS2O43903 313 aaKnown RBP5.72□□□□□ -1.49
LRCH3-217ENST00000483442 EDN3P14138 238 aa5.72□□□□□ -1.49
LRCH3-217ENST00000483442 ZNF423Q2M1K9 1284 aa5.72□□□□□ -1.49
LRCH3-217ENST00000483442 SPRED3Q2MJR0 410 aa5.72□□□□□ -1.49
LRCH3-217ENST00000483442 NUTM2GQ5VZR2 741 aa5.72□□□□□ -1.49
LRCH3-217ENST00000483442 ALKBH2Q6NS38 261 aa5.72□□□□□ -1.49
LRCH3-217ENST00000483442 NFXL1Q6ZNB6 911 aa5.72□□□□□ -1.49
LRCH3-217ENST00000483442 C2CD4AQ8NCU7 369 aaPredicted RBP5.72□□□□□ -1.49
LRCH3-217ENST00000483442 TTC16Q8NEE8 873 aa5.72□□□□□ -1.49
LRCH3-217ENST00000483442 FBLIM1Q8WUP2 373 aa5.72□□□□□ -1.49
LRCH3-217ENST00000483442 FMNL2Q96PY5 1086 aa5.72□□□□□ -1.49
LRCH3-217ENST00000483442 SLC26A8Q96RN1 970 aa5.72□□□□□ -1.49
LRCH3-217ENST00000483442 SUGCTQ9HAC7 445 aa5.72□□□□□ -1.49
LRCH3-217ENST00000483442 HIF3AQ9Y2N7 669 aa5.72□□□□□ -1.49
LRCH3-217ENST00000483442 EID1Q9Y6B2 187 aa5.72□□□□□ -1.49
LRCH3-217ENST00000483442 ITSN2Q9NZM3 1697 aa5.72□□□□□ -1.49
LRCH3-217ENST00000483442 TMEM94Q12767 1356 aa5.71□□□□□ -1.5
LRCH3-217ENST00000483442 JCADQ9P266 1359 aa5.71□□□□□ -1.5
LRCH3-217ENST00000483442 STRCP1A6NGW2 1772 aa5.71□□□□□ -1.5
LRCH3-217ENST00000483442 ATP7AQ04656 1500 aa5.71□□□□□ -1.5
LRCH3-217ENST00000483442 SYCP2Q9BX26 1530 aa5.71□□□□□ -1.5
LRCH3-217ENST00000483442 FAM13AO94988 1023 aa5.71□□□□□ -1.5
LRCH3-217ENST00000483442 ECEL1O95672 775 aa5.71□□□□□ -1.5
LRCH3-217ENST00000483442 ABL1P00519 1130 aa5.71□□□□□ -1.5
LRCH3-217ENST00000483442 KCNA6P17658 529 aa5.71□□□□□ -1.5
LRCH3-217ENST00000483442 GRIK1P39086 918 aa5.71□□□□□ -1.5
LRCH3-217ENST00000483442 GRIA4P48058 902 aa5.71□□□□□ -1.5
LRCH3-217ENST00000483442 FKBP4Q02790 459 aaKnown RBP eCLIP5.71□□□□□ -1.5
LRCH3-217ENST00000483442 GSTM4Q03013 218 aa5.71□□□□□ -1.5
LRCH3-217ENST00000483442 USPL1Q5W0Q7 1092 aa5.71□□□□□ -1.5
LRCH3-217ENST00000483442 TCF12Q99081 682 aa5.71□□□□□ -1.5
LRCH3-217ENST00000483442 SOX17Q9H6I2 414 aaPredicted RBP5.71□□□□□ -1.5
LRCH3-217ENST00000483442 AMOTL2Q9Y2J4 779 aa5.71□□□□□ -1.5
LRCH3-217ENST00000483442 KIAA1107Q9UPP5 1409 aa5.71□□□□□ -1.5
LRCH3-217ENST00000483442 ARHGAP35Q9NRY4 1499 aa5.71□□□□□ -1.5
LRCH3-217ENST00000483442 CCNB3Q8WWL7 1395 aa5.7□□□□□ -1.5
LRCH3-217ENST00000483442 GPATCH8Q9UKJ3 1502 aaKnown RBP5.7□□□□□ -1.5
LRCH3-217ENST00000483442 A0A1W2PP55 124 aa5.7□□□□□ -1.5
LRCH3-217ENST00000483442 WNT11O96014 354 aa5.7□□□□□ -1.5
LRCH3-217ENST00000483442 COL19A1Q14993 1142 aa5.7□□□□□ -1.5
LRCH3-217ENST00000483442 NFKBIBQ15653 356 aa5.7□□□□□ -1.5
LRCH3-217ENST00000483442 MSMPQ1L6U9 139 aa5.7□□□□□ -1.5
LRCH3-217ENST00000483442 EXOSC6Q5RKV6 272 aaKnown RBP5.7□□□□□ -1.5
LRCH3-217ENST00000483442 GATA6Q92908 595 aa5.7□□□□□ -1.5
LRCH3-217ENST00000483442 PIM2Q9P1W9 311 aa5.7□□□□□ -1.5
LRCH3-217ENST00000483442 ADGRE2Q9UHX3 823 aa5.7□□□□□ -1.5
LRCH3-217ENST00000483442 POLR1AO95602 1720 aaPredicted RBP5.7□□□□□ -1.5
LRCH3-217ENST00000483442 PZPP20742 1482 aa5.7□□□□□ -1.5
LRCH3-217ENST00000483442 NLRP1Q9C000 1473 aa5.7□□□□□ -1.5
LRCH3-217ENST00000483442 EEA1Q15075 1411 aa5.69□□□□□ -1.5
LRCH3-217ENST00000483442 A0A096LPE4 126 aa5.69□□□□□ -1.5
LRCH3-217ENST00000483442 FAM95CA0A1B0GW59 222 aa5.69□□□□□ -1.5
LRCH3-217ENST00000483442 A0A1W2PPZ6 126 aa5.69□□□□□ -1.5
LRCH3-217ENST00000483442 PAX4O43316 350 aa5.69□□□□□ -1.5
LRCH3-217ENST00000483442 SOX4Q06945 474 aaPredicted RBP5.69□□□□□ -1.5
LRCH3-217ENST00000483442 CCNJLQ8IV13 435 aa5.69□□□□□ -1.5
LRCH3-217ENST00000483442 ABI1Q8IZP0 508 aa5.69□□□□□ -1.5
LRCH3-217ENST00000483442 CYP4F12Q9HCS2 524 aa5.69□□□□□ -1.5
LRCH3-217ENST00000483442 SRCAPQ6ZRS2 3230 aa5.69□□□□□ -1.5
LRCH3-217ENST00000483442 PREX2Q70Z35 1606 aa5.69□□□□□ -1.5
LRCH3-217ENST00000483442 RNF17Q9BXT8 1623 aaKnown RBP5.69□□□□□ -1.5
LRCH3-217ENST00000483442 SPATA31A6Q5VVP1 1343 aa5.69□□□□□ -1.5
LRCH3-217ENST00000483442 IQGAP1P46940 1657 aa5.69□□□□□ -1.5
LRCH3-217ENST00000483442 DEPDC5O75140 1603 aa5.68□□□□□ -1.5
LRCH3-217ENST00000483442 TSPY4P0CV99 314 aa5.68□□□□□ -1.5
LRCH3-217ENST00000483442 TSPY10P0CW01 314 aa5.68□□□□□ -1.5
LRCH3-217ENST00000483442 USP5P45974 858 aa5.68□□□□□ -1.5
LRCH3-217ENST00000483442 PCDH1Q08174 1060 aa5.68□□□□□ -1.5
LRCH3-217ENST00000483442 EHHADHQ08426 723 aa5.68□□□□□ -1.5
LRCH3-217ENST00000483442 SF3B2Q13435 895 aaKnown RBP5.68□□□□□ -1.5
LRCH3-217ENST00000483442 C14orf37Q86TY3 774 aa5.68□□□□□ -1.5
LRCH3-217ENST00000483442 GALNT12Q8IXK2 581 aa5.68□□□□□ -1.5
LRCH3-217ENST00000483442 TRIM56Q9BRZ2 755 aaKnown RBP5.68□□□□□ -1.5
LRCH3-217ENST00000483442 PRKAG2Q9UGJ0 569 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms