RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 SIL1Q9H173 461 aa9.22□□□□□ -0.93
CSDE1-206ENST00000483030 UNC93B1Q9H1C4 597 aa9.22□□□□□ -0.93
CSDE1-206ENST00000483030 PICK1Q9NRD5 415 aa9.22□□□□□ -0.93
CSDE1-206ENST00000483030 GNL3LQ9NVN8 582 aaKnown RBP9.22□□□□□ -0.93
CSDE1-206ENST00000483030 CEP126Q9P2H0 1117 aa9.22□□□□□ -0.93
CSDE1-206ENST00000483030 NR2E3Q9Y5X4 410 aa9.22□□□□□ -0.93
CSDE1-206ENST00000483030 PTPRCP08575 1304 aa9.22□□□□□ -0.93
CSDE1-206ENST00000483030 TRIOBPQ9H2D6 2365 aa9.21□□□□□ -0.93
CSDE1-206ENST00000483030 ADCY3O60266 1144 aa9.21□□□□□ -0.94
CSDE1-206ENST00000483030 FARP2O94887 1054 aaPredicted RBP9.21□□□□□ -0.94
CSDE1-206ENST00000483030 SGPL1O95470 568 aa9.21□□□□□ -0.94
CSDE1-206ENST00000483030 SLURP2P0DP57 97 aa9.21□□□□□ -0.94
CSDE1-206ENST00000483030 ELNP15502 786 aa9.21□□□□□ -0.94
CSDE1-206ENST00000483030 PTPRAP18433 802 aa9.21□□□□□ -0.94
CSDE1-206ENST00000483030 FLT3LGP49771 235 aa9.21□□□□□ -0.94
CSDE1-206ENST00000483030 RGS3P49796 1198 aa9.21□□□□□ -0.94
CSDE1-206ENST00000483030 ATP2B3Q16720 1220 aa9.21□□□□□ -0.94
CSDE1-206ENST00000483030 GADL1Q6ZQY3 521 aa9.21□□□□□ -0.94
CSDE1-206ENST00000483030 ZSCAN29Q8IWY8 852 aaPredicted RBP9.21□□□□□ -0.94
CSDE1-206ENST00000483030 SCYL3Q8IZE3 742 aa9.21□□□□□ -0.94
CSDE1-206ENST00000483030 SLAIN1Q8ND83 568 aa9.21□□□□□ -0.94
CSDE1-206ENST00000483030 DENND2AQ9ULE3 1009 aa9.21□□□□□ -0.94
CSDE1-206ENST00000483030 AFG3L2Q9Y4W6 797 aa9.21□□□□□ -0.94
CSDE1-206ENST00000483030 LRRFIP2Q9Y608 721 aaKnown RBP9.21□□□□□ -0.94
CSDE1-206ENST00000483030 ARAP2Q8WZ64 1704 aa9.2□□□□□ -0.94
CSDE1-206ENST00000483030 ZSWIM8A7E2V4 1837 aa9.2□□□□□ -0.94
CSDE1-206ENST00000483030 CEP290O15078 2479 aa9.2□□□□□ -0.94
CSDE1-206ENST00000483030 A0A0G2JLL6 359 aaPredicted RBP9.2□□□□□ -0.94
CSDE1-206ENST00000483030 ZBTB7BO15156 539 aaPredicted RBP9.2□□□□□ -0.94
CSDE1-206ENST00000483030 ENTPD3O75355 529 aa9.2□□□□□ -0.94
CSDE1-206ENST00000483030 TFRCP02786 760 aaKnown RBP9.2□□□□□ -0.94
CSDE1-206ENST00000483030 PHKA1P46020 1223 aa9.2□□□□□ -0.94
CSDE1-206ENST00000483030 SH3BP5LQ7L8J4 393 aa9.2□□□□□ -0.94
CSDE1-206ENST00000483030 PRRT2Q7Z6L0 340 aaPredicted RBP9.2□□□□□ -0.94
CSDE1-206ENST00000483030 IDI2Q9BXS1 227 aa9.2□□□□□ -0.94
CSDE1-206ENST00000483030 PRO3102Q9H379 93 aa9.2□□□□□ -0.94
CSDE1-206ENST00000483030 CACNA1FO60840 1977 aa9.2□□□□□ -0.94
CSDE1-206ENST00000483030 ZNF521Q96K83 1311 aa9.2□□□□□ -0.94
CSDE1-206ENST00000483030 DDTLA6NHG4 134 aaPredicted RBP9.19□□□□□ -0.94
CSDE1-206ENST00000483030 TRIM75PA6NK02 468 aa9.19□□□□□ -0.94
CSDE1-206ENST00000483030 TNPO2O14787 897 aaKnown RBP9.19□□□□□ -0.94
CSDE1-206ENST00000483030 EVI5O60447 810 aa9.19□□□□□ -0.94
CSDE1-206ENST00000483030 CTNND1O60716 968 aaKnown RBP9.19□□□□□ -0.94
CSDE1-206ENST00000483030 CIAO1O76071 339 aa9.19□□□□□ -0.94
CSDE1-206ENST00000483030 INHAP05111 366 aa9.19□□□□□ -0.94
CSDE1-206ENST00000483030 ADORA1P30542 326 aa9.19□□□□□ -0.94
CSDE1-206ENST00000483030 MAP3K10Q02779 954 aa9.19□□□□□ -0.94
CSDE1-206ENST00000483030 CCDC84Q86UT8 332 aaPredicted RBP9.19□□□□□ -0.94
CSDE1-206ENST00000483030 SMCR8Q8TEV9 937 aaPredicted RBP9.19□□□□□ -0.94
CSDE1-206ENST00000483030 DEFB118Q96PH6 123 aa9.19□□□□□ -0.94
CSDE1-206ENST00000483030 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.19□□□□□ -0.94
CSDE1-206ENST00000483030 PA2G4Q9UQ80 394 aaKnown RBP9.19□□□□□ -0.94
CSDE1-206ENST00000483030 SALL1Q9NSC2 1324 aa9.19□□□□□ -0.94
CSDE1-206ENST00000483030 ATRNL1Q5VV63 1379 aa9.19□□□□□ -0.94
CSDE1-206ENST00000483030 GAKO14976 1311 aa9.18□□□□□ -0.94
CSDE1-206ENST00000483030 SEMA3EO15041 775 aa9.18□□□□□ -0.94
CSDE1-206ENST00000483030 UBTFL1P0CB47 393 aaPredicted RBP9.18□□□□□ -0.94
CSDE1-206ENST00000483030 IL15P40933 162 aaPredicted RBP9.18□□□□□ -0.94
CSDE1-206ENST00000483030 TIMM10P62072 90 aa9.18□□□□□ -0.94
CSDE1-206ENST00000483030 PICALMQ13492 652 aa9.18□□□□□ -0.94
CSDE1-206ENST00000483030 IRF5Q13568 498 aa9.18□□□□□ -0.94
CSDE1-206ENST00000483030 CCDC102BQ68D86 513 aa9.18□□□□□ -0.94
CSDE1-206ENST00000483030 SAMD1Q6SPF0 538 aaPredicted RBP9.18□□□□□ -0.94
CSDE1-206ENST00000483030 DZIP1Q86YF9 867 aaKnown RBP9.18□□□□□ -0.94
CSDE1-206ENST00000483030 ZGPATQ8N5A5 531 aaKnown RBP9.18□□□□□ -0.94
CSDE1-206ENST00000483030 ANKRD13CQ8N6S4 541 aa9.18□□□□□ -0.94
CSDE1-206ENST00000483030 PXYLP1Q8TE99 480 aa9.18□□□□□ -0.94
CSDE1-206ENST00000483030 DDX4Q9NQI0 724 aaKnown RBP9.18□□□□□ -0.94
CSDE1-206ENST00000483030 ABCF2Q9UG63 623 aa9.18□□□□□ -0.94
CSDE1-206ENST00000483030 STAP2Q9UGK3 403 aa9.18□□□□□ -0.94
CSDE1-206ENST00000483030 SLC45A1Q9Y2W3 748 aa9.18□□□□□ -0.94
CSDE1-206ENST00000483030 E9PSI1 815 aa9.17□□□□□ -0.94
CSDE1-206ENST00000483030 TREML2Q5T2D2 321 aa9.17□□□□□ -0.94
CSDE1-206ENST00000483030 SLF2Q8IX21 1173 aa9.17□□□□□ -0.94
CSDE1-206ENST00000483030 SLC17A8Q8NDX2 589 aa9.17□□□□□ -0.94
CSDE1-206ENST00000483030 COA7Q96BR5 231 aa9.17□□□□□ -0.94
CSDE1-206ENST00000483030 FAM163AQ96GL9 167 aaPredicted RBP9.17□□□□□ -0.94
CSDE1-206ENST00000483030 PAWRQ96IZ0 340 aaKnown RBP9.17□□□□□ -0.94
CSDE1-206ENST00000483030 SMC4Q9NTJ3 1288 aa9.17□□□□□ -0.94
CSDE1-206ENST00000483030 AGTPBP1Q9UPW5 1226 aa9.17□□□□□ -0.94
CSDE1-206ENST00000483030 FAM196BA6NMK8 535 aa9.16□□□□□ -0.94
CSDE1-206ENST00000483030 SOX1O00570 391 aaPredicted RBP9.16□□□□□ -0.94
CSDE1-206ENST00000483030 CAPN2P17655 700 aa9.16□□□□□ -0.94
CSDE1-206ENST00000483030 BTDP43251 543 aa9.16□□□□□ -0.94
CSDE1-206ENST00000483030 VASPP50552 380 aaPredicted RBP9.16□□□□□ -0.94
CSDE1-206ENST00000483030 SLFN5Q08AF3 891 aa9.16□□□□□ -0.94
CSDE1-206ENST00000483030 SPP2Q13103 211 aa9.16□□□□□ -0.94
CSDE1-206ENST00000483030 RASGRF1Q13972 1273 aa9.16□□□□□ -0.94
CSDE1-206ENST00000483030 ALDH1L2Q3SY69 923 aa9.16□□□□□ -0.94
CSDE1-206ENST00000483030 TPRNQ4KMQ1 711 aa9.16□□□□□ -0.94
CSDE1-206ENST00000483030 SPTY2D1Q68D10 685 aaPredicted RBP9.16□□□□□ -0.94
CSDE1-206ENST00000483030 CRISPLD2Q9H0B8 497 aa9.16□□□□□ -0.94
CSDE1-206ENST00000483030 COPRSQ9NQ92 184 aa9.16□□□□□ -0.94
CSDE1-206ENST00000483030 PAK6Q9NQU5 681 aaPredicted RBP9.16□□□□□ -0.94
CSDE1-206ENST00000483030 MROH7-TTC4A0A0A0MT08 1334 aa9.15□□□□□ -0.94
CSDE1-206ENST00000483030 GPR75-ASB3A0A0A6YYF3 556 aa9.15□□□□□ -0.94
CSDE1-206ENST00000483030 A0A1W2PPC1 479 aa9.15□□□□□ -0.94
CSDE1-206ENST00000483030 DLL1O00548 723 aa9.15□□□□□ -0.94
CSDE1-206ENST00000483030 TBC1D12O60347 775 aa9.15□□□□□ -0.94
CSDE1-206ENST00000483030 RHBDL3P58872 404 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms