RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 MANSC4A6NHS7 340 aaPredicted RBP15.85■□□□□ 0.13
COL21A1-209ENST00000482933 SEMA3EO15041 775 aa15.85■□□□□ 0.13
COL21A1-209ENST00000482933 CLUAP1Q96AJ1 413 aa15.85■□□□□ 0.13
COL21A1-209ENST00000482933 AKAP2Q9Y2D5 859 aa15.85■□□□□ 0.13
COL21A1-209ENST00000482933 ALDH1A1P00352 501 aa15.85■□□□□ 0.13
COL21A1-209ENST00000482933 APOBEC3HQ6NTF7 200 aaKnown RBP15.85■□□□□ 0.13
COL21A1-209ENST00000482933 ZGPATQ8N5A5 531 aaKnown RBP15.85■□□□□ 0.13
COL21A1-209ENST00000482933 WNK4Q96J92 1243 aa15.85■□□□□ 0.13
COL21A1-209ENST00000482933 TEPSINQ96N21 525 aa15.85■□□□□ 0.13
COL21A1-209ENST00000482933 TMEM39BQ9GZU3 492 aa15.85■□□□□ 0.13
COL21A1-209ENST00000482933 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.85■□□□□ 0.13
COL21A1-209ENST00000482933 CCDC85CA6NKD9 419 aa15.84■□□□□ 0.13
COL21A1-209ENST00000482933 FKBP1CQ5VVH2 108 aa15.84■□□□□ 0.13
COL21A1-209ENST00000482933 FAM83AQ86UY5 434 aa15.84■□□□□ 0.13
COL21A1-209ENST00000482933 HOOK2Q96ED9 719 aa15.84■□□□□ 0.13
COL21A1-209ENST00000482933 CLMNQ96JQ2 1002 aa15.84■□□□□ 0.13
COL21A1-209ENST00000482933 TNNQ9UQP3 1299 aa15.84■□□□□ 0.13
COL21A1-209ENST00000482933 SALL1Q9NSC2 1324 aa15.83■□□□□ 0.13
COL21A1-209ENST00000482933 TBC1D8O95759 1140 aa15.83■□□□□ 0.12
COL21A1-209ENST00000482933 LDHBP07195 334 aaKnown RBP15.83■□□□□ 0.12
COL21A1-209ENST00000482933 PHKA1P46020 1223 aa15.83■□□□□ 0.12
COL21A1-209ENST00000482933 NOM1Q5C9Z4 860 aaKnown RBP15.83■□□□□ 0.12
COL21A1-209ENST00000482933 CCDC102BQ68D86 513 aa15.83■□□□□ 0.12
COL21A1-209ENST00000482933 TMEM57Q8N5G2 664 aa15.83■□□□□ 0.12
COL21A1-209ENST00000482933 CFHR5Q9BXR6 569 aa15.83■□□□□ 0.12
COL21A1-209ENST00000482933 ZBED9Q6R2W3 1325 aa15.82■□□□□ 0.12
COL21A1-209ENST00000482933 A0A1B0GUL7 405 aa15.82■□□□□ 0.12
COL21A1-209ENST00000482933 TIMM10P62072 90 aa15.82■□□□□ 0.12
COL21A1-209ENST00000482933 G3BP1Q13283 466 aaKnown RBP eCLIP15.82■□□□□ 0.12
COL21A1-209ENST00000482933 CTU1Q7Z7A3 348 aaKnown RBP15.82■□□□□ 0.12
COL21A1-209ENST00000482933 FTSJ3Q8IY81 847 aaKnown RBP15.82■□□□□ 0.12
COL21A1-209ENST00000482933 PDE4AP27815 886 aa15.81■□□□□ 0.12
COL21A1-209ENST00000482933 PRDX5P30044 214 aa15.81■□□□□ 0.12
COL21A1-209ENST00000482933 ADORA1P30542 326 aa15.81■□□□□ 0.12
COL21A1-209ENST00000482933 CACNB3P54284 484 aa15.81■□□□□ 0.12
COL21A1-209ENST00000482933 MAP3K9P80192 1104 aa15.81■□□□□ 0.12
COL21A1-209ENST00000482933 TFCP2Q12800 502 aa15.81■□□□□ 0.12
COL21A1-209ENST00000482933 MVPQ14764 893 aaKnown RBP15.81■□□□□ 0.12
COL21A1-209ENST00000482933 OTUD7BQ6GQQ9 843 aa15.81■□□□□ 0.12
COL21A1-209ENST00000482933 XAGE2Q96GT9 111 aa15.81■□□□□ 0.12
COL21A1-209ENST00000482933 RPAP1Q9BWH6 1393 aaPredicted RBP15.81■□□□□ 0.12
COL21A1-209ENST00000482933 GPR25O00155 361 aa15.8■□□□□ 0.12
COL21A1-209ENST00000482933 LSM11P83369 360 aaKnown RBP eCLIP15.8■□□□□ 0.12
COL21A1-209ENST00000482933 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.8■□□□□ 0.12
COL21A1-209ENST00000482933 ZNF296Q8WUU4 475 aaPredicted RBP15.8■□□□□ 0.12
COL21A1-209ENST00000482933 ELP3Q9H9T3 547 aa15.8■□□□□ 0.12
COL21A1-209ENST00000482933 DAGLAQ9Y4D2 1042 aa15.8■□□□□ 0.12
COL21A1-209ENST00000482933 CSADQ9Y600 493 aa15.8■□□□□ 0.12
COL21A1-209ENST00000482933 PDS5AQ29RF7 1337 aaKnown RBP15.8■□□□□ 0.12
COL21A1-209ENST00000482933 PNMA6EA0A0J9YXQ4 647 aa15.79■□□□□ 0.12
COL21A1-209ENST00000482933 DIXDC1Q155Q3 683 aa15.79■□□□□ 0.12
COL21A1-209ENST00000482933 PPP1R15BQ5SWA1 713 aa15.79■□□□□ 0.12
COL21A1-209ENST00000482933 DCAF15Q66K64 600 aa15.79■□□□□ 0.12
COL21A1-209ENST00000482933 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.79■□□□□ 0.12
COL21A1-209ENST00000482933 SLF2Q8IX21 1173 aa15.79■□□□□ 0.12
COL21A1-209ENST00000482933 OPTNQ96CV9 577 aa15.79■□□□□ 0.12
COL21A1-209ENST00000482933 NEUROD6Q96NK8 337 aa15.79■□□□□ 0.12
COL21A1-209ENST00000482933 LAMB1P07942 1786 aa15.79■□□□□ 0.12
COL21A1-209ENST00000482933 PKN2Q16513 984 aaKnown RBP15.78■□□□□ 0.12
COL21A1-209ENST00000482933 SPTY2D1Q68D10 685 aaPredicted RBP15.78■□□□□ 0.12
COL21A1-209ENST00000482933 FAM151AQ8WW52 585 aa15.78■□□□□ 0.12
COL21A1-209ENST00000482933 RNF166Q96A37 237 aaPredicted RBP15.78■□□□□ 0.12
COL21A1-209ENST00000482933 OTOFQ9HC10 1997 aa15.78■□□□□ 0.12
COL21A1-209ENST00000482933 TESPA1A2RU30 521 aaPredicted RBP15.77■□□□□ 0.12
COL21A1-209ENST00000482933 FKTNO75072 461 aa15.77■□□□□ 0.12
COL21A1-209ENST00000482933 GJA5P36382 358 aa15.77■□□□□ 0.12
COL21A1-209ENST00000482933 RASGRF1Q13972 1273 aa15.77■□□□□ 0.12
COL21A1-209ENST00000482933 VGLL4Q14135 290 aa15.77■□□□□ 0.12
COL21A1-209ENST00000482933 GORABQ5T7V8 394 aa15.77■□□□□ 0.12
COL21A1-209ENST00000482933 CDC42EP5Q6NZY7 148 aa15.77■□□□□ 0.12
COL21A1-209ENST00000482933 DZIP1Q86YF9 867 aaKnown RBP15.77■□□□□ 0.12
COL21A1-209ENST00000482933 ITPRIPQ8IWB1 547 aa15.77■□□□□ 0.12
COL21A1-209ENST00000482933 ABCF2Q9UG63 623 aa15.77■□□□□ 0.12
COL21A1-209ENST00000482933 IGF2BP3O00425 579 aaKnown RBP eCLIP15.77■□□□□ 0.11
COL21A1-209ENST00000482933 ATP8B2P98198 1209 aa15.77■□□□□ 0.11
COL21A1-209ENST00000482933 ERICH6Q7L0X2 663 aa15.77■□□□□ 0.11
COL21A1-209ENST00000482933 WRNIP1Q96S55 665 aa15.77■□□□□ 0.11
COL21A1-209ENST00000482933 ZNF341Q9BYN7 854 aa15.77■□□□□ 0.11
COL21A1-209ENST00000482933 USP40Q9NVE5 1235 aa15.77■□□□□ 0.11
COL21A1-209ENST00000482933 GTF2A2P52657 109 aa15.76■□□□□ 0.11
COL21A1-209ENST00000482933 SSH3Q8TE77 659 aa15.76■□□□□ 0.11
COL21A1-209ENST00000482933 SPDYE5A6NIY4 337 aa15.75■□□□□ 0.11
COL21A1-209ENST00000482933 ZBTB7BO15156 539 aaPredicted RBP15.75■□□□□ 0.11
COL21A1-209ENST00000482933 RGS19P49795 217 aa15.75■□□□□ 0.11
COL21A1-209ENST00000482933 TCP10Q12799 353 aa15.75■□□□□ 0.11
COL21A1-209ENST00000482933 OS9Q13438 667 aaPredicted RBP15.75■□□□□ 0.11
COL21A1-209ENST00000482933 ERO1BQ86YB8 467 aa15.75■□□□□ 0.11
COL21A1-209ENST00000482933 OXER1Q8TDS5 423 aa15.75■□□□□ 0.11
COL21A1-209ENST00000482933 R3HDMLQ9H3Y0 253 aa15.75■□□□□ 0.11
COL21A1-209ENST00000482933 GPR108Q9NPR9 543 aa15.75■□□□□ 0.11
COL21A1-209ENST00000482933 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.75■□□□□ 0.11
COL21A1-209ENST00000482933 GAKO14976 1311 aa15.75■□□□□ 0.11
COL21A1-209ENST00000482933 MYH2Q9UKX2 1941 aa15.75■□□□□ 0.11
COL21A1-209ENST00000482933 AK9Q5TCS8 1911 aa15.74■□□□□ 0.11
COL21A1-209ENST00000482933 UQCRFS1P1P0C7P4 283 aa15.74■□□□□ 0.11
COL21A1-209ENST00000482933 MS4A1P11836 297 aa15.74■□□□□ 0.11
COL21A1-209ENST00000482933 ARID4AP29374 1257 aaPredicted RBP15.74■□□□□ 0.11
COL21A1-209ENST00000482933 NFIAQ12857 509 aa15.74■□□□□ 0.11
COL21A1-209ENST00000482933 MIGA2Q7L4E1 593 aa15.74■□□□□ 0.11
COL21A1-209ENST00000482933 SPATA5Q8NB90 893 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms