RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 FPGT-TNNI3KV9GXZ4 949 aa12.61□□□□□ -0.39
RPGR-208ENST00000482855 TUBBP07437 444 aa12.61□□□□□ -0.39
RPGR-208ENST00000482855 SART3Q15020 963 aaKnown RBP12.61□□□□□ -0.39
RPGR-208ENST00000482855 DNAJC21Q5F1R6 531 aaKnown RBP12.61□□□□□ -0.39
RPGR-208ENST00000482855 ESCO1Q5FWF5 840 aa12.61□□□□□ -0.39
RPGR-208ENST00000482855 HPSEQ9Y251 543 aa12.61□□□□□ -0.39
RPGR-208ENST00000482855 KIF28PB7ZC32 967 aa12.6□□□□□ -0.39
RPGR-208ENST00000482855 TADA2BQ86TJ2 420 aa12.6□□□□□ -0.39
RPGR-208ENST00000482855 GPATCH11Q8N954 259 aa12.6□□□□□ -0.39
RPGR-208ENST00000482855 HAUS7Q99871 368 aa12.6□□□□□ -0.39
RPGR-208ENST00000482855 PLEKHA4Q9H4M7 779 aa12.6□□□□□ -0.39
RPGR-208ENST00000482855 A0A087WUV0 522 aaPredicted RBP12.6□□□□□ -0.39
RPGR-208ENST00000482855 CTAGE9A4FU28 777 aa12.6□□□□□ -0.39
RPGR-208ENST00000482855 SOWAHDA6NJG2 315 aa12.6□□□□□ -0.39
RPGR-208ENST00000482855 DDX58O95786 925 aaKnown RBP12.6□□□□□ -0.39
RPGR-208ENST00000482855 KIF23Q02241 960 aaPredicted RBP12.6□□□□□ -0.39
RPGR-208ENST00000482855 ZNF569Q5MCW4 686 aa12.6□□□□□ -0.39
RPGR-208ENST00000482855 MCTP2Q6DN12 878 aa12.6□□□□□ -0.39
RPGR-208ENST00000482855 CCDC91Q7Z6B0 441 aa12.6□□□□□ -0.39
RPGR-208ENST00000482855 KBTBD3Q8NAB2 608 aa12.6□□□□□ -0.39
RPGR-208ENST00000482855 NGDNQ8NEJ9 315 aaKnown RBP12.6□□□□□ -0.39
RPGR-208ENST00000482855 AFAP1L1Q8TED9 768 aa12.6□□□□□ -0.39
RPGR-208ENST00000482855 FAM107BQ9H098 131 aa12.6□□□□□ -0.39
RPGR-208ENST00000482855 RAI14Q9P0K7 980 aa12.6□□□□□ -0.39
RPGR-208ENST00000482855 CTAGE15A4D2H0 777 aa12.59□□□□□ -0.39
RPGR-208ENST00000482855 AKR1B15C9JRZ8 316 aaPredicted RBP12.59□□□□□ -0.39
RPGR-208ENST00000482855 CTAGE8P0CG41 777 aa12.59□□□□□ -0.39
RPGR-208ENST00000482855 NLRP6P59044 892 aa12.59□□□□□ -0.39
RPGR-208ENST00000482855 PDE4BQ07343 736 aa12.59□□□□□ -0.39
RPGR-208ENST00000482855 CCDC102BQ68D86 513 aa12.59□□□□□ -0.39
RPGR-208ENST00000482855 SHC4Q6S5L8 630 aa12.59□□□□□ -0.39
RPGR-208ENST00000482855 KRT28Q7Z3Y7 464 aa12.59□□□□□ -0.39
RPGR-208ENST00000482855 CTAGE6Q86UF2 777 aa12.59□□□□□ -0.39
RPGR-208ENST00000482855 ARHGEF25Q86VW2 580 aa12.59□□□□□ -0.39
RPGR-208ENST00000482855 METTL16Q86W50 562 aaKnown RBP12.59□□□□□ -0.39
RPGR-208ENST00000482855 CTAGE4Q8IX94 777 aa12.59□□□□□ -0.39
RPGR-208ENST00000482855 NFE2L3Q9Y4A8 694 aa12.59□□□□□ -0.39
RPGR-208ENST00000482855 PCDHA5Q9Y5H7 936 aa12.59□□□□□ -0.39
RPGR-208ENST00000482855 ADGRG1Q9Y653 693 aa12.59□□□□□ -0.39
RPGR-208ENST00000482855 CPLX1O14810 134 aa12.59□□□□□ -0.39
RPGR-208ENST00000482855 MMP14P50281 582 aa12.59□□□□□ -0.39
RPGR-208ENST00000482855 EIF5P55010 431 aaKnown RBP12.59□□□□□ -0.39
RPGR-208ENST00000482855 TFCP2Q12800 502 aa12.59□□□□□ -0.39
RPGR-208ENST00000482855 MICALL1Q8N3F8 863 aa12.59□□□□□ -0.39
RPGR-208ENST00000482855 ANKRD24Q8TF21 1146 aa12.59□□□□□ -0.39
RPGR-208ENST00000482855 PANX2Q96RD6 677 aa12.59□□□□□ -0.39
RPGR-208ENST00000482855 HELLSQ9NRZ9 838 aa12.59□□□□□ -0.39
RPGR-208ENST00000482855 GJB4Q9NTQ9 266 aa12.59□□□□□ -0.39
RPGR-208ENST00000482855 A0A0G2JLW4 131 aa12.58□□□□□ -0.4
RPGR-208ENST00000482855 RNF40O75150 1001 aa12.58□□□□□ -0.4
RPGR-208ENST00000482855 PPP6R2O75170 966 aa12.58□□□□□ -0.4
RPGR-208ENST00000482855 CDC27P30260 824 aa12.58□□□□□ -0.4
RPGR-208ENST00000482855 E2F4Q16254 413 aa12.58□□□□□ -0.4
RPGR-208ENST00000482855 SWT1Q5T5J6 900 aaKnown RBP12.58□□□□□ -0.4
RPGR-208ENST00000482855 DBNDD2Q9BQY9 259 aa12.58□□□□□ -0.4
RPGR-208ENST00000482855 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.58□□□□□ -0.4
RPGR-208ENST00000482855 RGS17Q9UGC6 210 aaPredicted RBP12.58□□□□□ -0.4
RPGR-208ENST00000482855 LRRIQ3A6PVS8 624 aaPredicted RBP12.58□□□□□ -0.4
RPGR-208ENST00000482855 AIMP1Q12904 312 aaKnown RBP12.58□□□□□ -0.4
RPGR-208ENST00000482855 NAA15Q9BXJ9 866 aaKnown RBP12.58□□□□□ -0.4
RPGR-208ENST00000482855 PARP4Q9UKK3 1724 aaKnown RBP12.58□□□□□ -0.4
RPGR-208ENST00000482855 GOLGA8BA8MQT2 603 aa12.57□□□□□ -0.4
RPGR-208ENST00000482855 ZNF18P17022 549 aa12.57□□□□□ -0.4
RPGR-208ENST00000482855 WHAMMP3Q1A5X7 153 aa12.57□□□□□ -0.4
RPGR-208ENST00000482855 LONRF3Q496Y0 759 aa12.57□□□□□ -0.4
RPGR-208ENST00000482855 RESP18Q5W5W9 173 aa12.57□□□□□ -0.4
RPGR-208ENST00000482855 CTCFLQ8NI51 663 aaPredicted RBP12.57□□□□□ -0.4
RPGR-208ENST00000482855 SECISBP2LQ93073 1101 aaKnown RBP12.57□□□□□ -0.4
RPGR-208ENST00000482855 COPRSQ9NQ92 184 aa12.57□□□□□ -0.4
RPGR-208ENST00000482855 DACH1Q9UI36 760 aa12.57□□□□□ -0.4
RPGR-208ENST00000482855 HOOK1Q9UJC3 728 aaKnown RBP12.57□□□□□ -0.4
RPGR-208ENST00000482855 NFAT5O94916 1531 aa12.57□□□□□ -0.4
RPGR-208ENST00000482855 BCL9LQ86UU0 1499 aa12.57□□□□□ -0.4
RPGR-208ENST00000482855 FAM237AA0A1B0GTK4 181 aa12.57□□□□□ -0.4
RPGR-208ENST00000482855 HSPD1P10809 573 aaKnown RBP12.57□□□□□ -0.4
RPGR-208ENST00000482855 BMP6P22004 513 aa12.57□□□□□ -0.4
RPGR-208ENST00000482855 RAD9BQ6WBX8 426 aa12.57□□□□□ -0.4
RPGR-208ENST00000482855 FOXP4Q8IVH2 680 aaPredicted RBP12.57□□□□□ -0.4
RPGR-208ENST00000482855 FBXL16Q8N461 479 aa12.57□□□□□ -0.4
RPGR-208ENST00000482855 CEP89Q96ST8 783 aa12.57□□□□□ -0.4
RPGR-208ENST00000482855 VIPAS39Q9H9C1 493 aa12.57□□□□□ -0.4
RPGR-208ENST00000482855 GPHNQ9NQX3 736 aaPredicted RBP12.57□□□□□ -0.4
RPGR-208ENST00000482855 KLF18A0A0U1RQI7 1052 aa12.57□□□□□ -0.4
RPGR-208ENST00000482855 PPFIBP1Q86W92 1011 aa12.57□□□□□ -0.4
RPGR-208ENST00000482855 NUTM2AQ8IVF1 878 aaPredicted RBP12.57□□□□□ -0.4
RPGR-208ENST00000482855 SLC35F6Q8N357 371 aa12.57□□□□□ -0.4
RPGR-208ENST00000482855 NAPGQ99747 312 aaPredicted RBP12.57□□□□□ -0.4
RPGR-208ENST00000482855 GLI3P10071 1580 aa12.56□□□□□ -0.4
RPGR-208ENST00000482855 PALLDQ8WX93 1383 aa12.56□□□□□ -0.4
RPGR-208ENST00000482855 RGPD3A6NKT7 1758 aaPredicted RBP12.56□□□□□ -0.4
RPGR-208ENST00000482855 RGPD4Q7Z3J3 1758 aa12.56□□□□□ -0.4
RPGR-208ENST00000482855 A0A0U1RQJ8 604 aa12.56□□□□□ -0.4
RPGR-208ENST00000482855 NEXNQ0ZGT2 675 aa12.56□□□□□ -0.4
RPGR-208ENST00000482855 EPHA10Q5JZY3 1008 aa12.56□□□□□ -0.4
RPGR-208ENST00000482855 ENOX1Q8TC92 643 aaKnown RBP12.56□□□□□ -0.4
RPGR-208ENST00000482855 ATRIPQ8WXE1 791 aa12.56□□□□□ -0.4
RPGR-208ENST00000482855 KCNH3Q9ULD8 1083 aa12.56□□□□□ -0.4
RPGR-208ENST00000482855 CCDC9Q9Y3X0 531 aaKnown RBP12.56□□□□□ -0.4
RPGR-208ENST00000482855 GOLIM4O00461 696 aa12.56□□□□□ -0.4
RPGR-208ENST00000482855 ERLIN2O94905 339 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms