RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 ZNF532Q9HCE3 1301 aa20.07■□□□□ 0.8
HMGN1-214ENST00000482733 SLC10A3P09131 477 aa20.07■□□□□ 0.8
HMGN1-214ENST00000482733 ADD2P35612 726 aa20.07■□□□□ 0.8
HMGN1-214ENST00000482733 UBE3CQ15386 1083 aa20.07■□□□□ 0.8
HMGN1-214ENST00000482733 LRRFIP1Q32MZ4 808 aaKnown RBP20.07■□□□□ 0.8
HMGN1-214ENST00000482733 ZSCAN29Q8IWY8 852 aaPredicted RBP20.07■□□□□ 0.8
HMGN1-214ENST00000482733 ZFPM1Q8IX07 1006 aa20.07■□□□□ 0.8
HMGN1-214ENST00000482733 ANKRD13AQ8IZ07 590 aa20.07■□□□□ 0.8
HMGN1-214ENST00000482733 KBTBD3Q8NAB2 608 aa20.07■□□□□ 0.8
HMGN1-214ENST00000482733 MIGA1Q8NAN2 632 aa20.07■□□□□ 0.8
HMGN1-214ENST00000482733 MAGEB6P1A0A0J9YX57 407 aa20.06■□□□□ 0.8
HMGN1-214ENST00000482733 TCRBV5S4A2TA0A5A2 114 aa20.06■□□□□ 0.8
HMGN1-214ENST00000482733 PDE1AP54750 535 aa20.06■□□□□ 0.8
HMGN1-214ENST00000482733 DYNLL1P63167 89 aaKnown RBP20.06■□□□□ 0.8
HMGN1-214ENST00000482733 CSRNP1Q96S65 589 aa20.06■□□□□ 0.8
HMGN1-214ENST00000482733 ZNF341Q9BYN7 854 aa20.06■□□□□ 0.8
HMGN1-214ENST00000482733 OSBPL5Q9H0X9 879 aaPredicted RBP20.06■□□□□ 0.8
HMGN1-214ENST00000482733 FZD1Q9UP38 647 aa20.06■□□□□ 0.8
HMGN1-214ENST00000482733 ATRNL1Q5VV63 1379 aa20.06■□□□□ 0.8
HMGN1-214ENST00000482733 COL2A1P02458 1487 aaPredicted RBP20.05■□□□□ 0.8
HMGN1-214ENST00000482733 DOCK2Q92608 1830 aa20.05■□□□□ 0.8
HMGN1-214ENST00000482733 FAM155AB1AL88 458 aaPredicted RBP20.05■□□□□ 0.8
HMGN1-214ENST00000482733 MAP3K9P80192 1104 aa20.05■□□□□ 0.8
HMGN1-214ENST00000482733 MAP2K1Q02750 393 aaPredicted RBP20.05■□□□□ 0.8
HMGN1-214ENST00000482733 RASAL3Q86YV0 1011 aa20.05■□□□□ 0.8
HMGN1-214ENST00000482733 TGFBRAP1Q8WUH2 860 aa20.05■□□□□ 0.8
HMGN1-214ENST00000482733 SLC10A4Q96EP9 437 aa20.05■□□□□ 0.8
HMGN1-214ENST00000482733 RIOK1Q9BRS2 568 aaKnown RBP20.05■□□□□ 0.8
HMGN1-214ENST00000482733 DHX36Q9H2U1 1008 aaKnown RBP20.05■□□□□ 0.8
HMGN1-214ENST00000482733 AOC2O75106 756 aa20.04■□□□□ 0.8
HMGN1-214ENST00000482733 ZFYP08048 801 aaPredicted RBP20.04■□□□□ 0.8
HMGN1-214ENST00000482733 MIGA2Q7L4E1 593 aa20.04■□□□□ 0.8
HMGN1-214ENST00000482733 SH3BP5LQ7L8J4 393 aa20.04■□□□□ 0.8
HMGN1-214ENST00000482733 REM2Q8IYK8 340 aaPredicted RBP20.04■□□□□ 0.8
HMGN1-214ENST00000482733 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.04■□□□□ 0.8
HMGN1-214ENST00000482733 CSADQ9Y600 493 aa20.04■□□□□ 0.8
HMGN1-214ENST00000482733 DDTLA6NHG4 134 aaPredicted RBP20.03■□□□□ 0.8
HMGN1-214ENST00000482733 USP5P45974 858 aa20.03■□□□□ 0.8
HMGN1-214ENST00000482733 CRNKL1Q9BZJ0 848 aaKnown RBP20.03■□□□□ 0.8
HMGN1-214ENST00000482733 FLT1P17948 1338 aa20.02■□□□□ 0.8
HMGN1-214ENST00000482733 TBC1D12O60347 775 aa20.02■□□□□ 0.8
HMGN1-214ENST00000482733 NEFLP07196 543 aa20.02■□□□□ 0.8
HMGN1-214ENST00000482733 MAP3K10Q02779 954 aa20.02■□□□□ 0.8
HMGN1-214ENST00000482733 MAPKAPK5Q8IW41 473 aa20.02■□□□□ 0.8
HMGN1-214ENST00000482733 WRNIP1Q96S55 665 aa20.02■□□□□ 0.8
HMGN1-214ENST00000482733 ZNF112Q9UJU3 913 aa20.02■□□□□ 0.8
HMGN1-214ENST00000482733 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.01■□□□□ 0.79
HMGN1-214ENST00000482733 EVI5LQ96CN4 794 aa20.01■□□□□ 0.79
HMGN1-214ENST00000482733 CLMNQ96JQ2 1002 aa20.01■□□□□ 0.79
HMGN1-214ENST00000482733 OSBPL3Q9H4L5 887 aa20.01■□□□□ 0.79
HMGN1-214ENST00000482733 PI4KBQ9UBF8 816 aa20.01■□□□□ 0.79
HMGN1-214ENST00000482733 RNF113AO15541 343 aaKnown RBP20■□□□□ 0.79
HMGN1-214ENST00000482733 ZBTB48P10074 688 aaPredicted RBP20■□□□□ 0.79
HMGN1-214ENST00000482733 KIF23Q02241 960 aaPredicted RBP20■□□□□ 0.79
HMGN1-214ENST00000482733 VGLL4Q14135 290 aa20■□□□□ 0.79
HMGN1-214ENST00000482733 SPRYD7Q5W111 196 aa20■□□□□ 0.79
HMGN1-214ENST00000482733 TICAM2Q86XR7 235 aa20■□□□□ 0.79
HMGN1-214ENST00000482733 PLEKHM2Q8IWE5 1019 aa20■□□□□ 0.79
HMGN1-214ENST00000482733 AIDAQ96BJ3 306 aa20■□□□□ 0.79
HMGN1-214ENST00000482733 FSD1Q9BTV5 496 aa20■□□□□ 0.79
HMGN1-214ENST00000482733 BEGAINQ9BUH8 593 aa20■□□□□ 0.79
HMGN1-214ENST00000482733 WBP1LQ9NX94 342 aa20■□□□□ 0.79
HMGN1-214ENST00000482733 HERC5Q9UII4 1024 aaKnown RBP20■□□□□ 0.79
HMGN1-214ENST00000482733 MYO5AQ9Y4I1 1855 aaKnown RBP20■□□□□ 0.79
HMGN1-214ENST00000482733 THSD7BQ9C0I4 1608 aa19.99■□□□□ 0.79
HMGN1-214ENST00000482733 MBD4O95243 580 aa19.99■□□□□ 0.79
HMGN1-214ENST00000482733 HLA-DOAP06340 250 aa19.99■□□□□ 0.79
HMGN1-214ENST00000482733 LCORLQ8N3X6 602 aa19.99■□□□□ 0.79
HMGN1-214ENST00000482733 APPBP2Q92624 585 aa19.99■□□□□ 0.79
HMGN1-214ENST00000482733 WNK4Q96J92 1243 aa19.99■□□□□ 0.79
HMGN1-214ENST00000482733 ELP3Q9H9T3 547 aa19.99■□□□□ 0.79
HMGN1-214ENST00000482733 FOXP4Q8IVH2 680 aaPredicted RBP19.98■□□□□ 0.79
HMGN1-214ENST00000482733 ARMT1Q9H993 441 aa19.98■□□□□ 0.79
HMGN1-214ENST00000482733 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.98■□□□□ 0.79
HMGN1-214ENST00000482733 PHF20L1A8MW92 1017 aa19.97■□□□□ 0.79
HMGN1-214ENST00000482733 HSPA1AP0DMV8 641 aaKnown RBP19.97■□□□□ 0.79
HMGN1-214ENST00000482733 HSPA1BP0DMV9 641 aaKnown RBP19.97■□□□□ 0.79
HMGN1-214ENST00000482733 SREBF2Q12772 1141 aa19.97■□□□□ 0.79
HMGN1-214ENST00000482733 SLFNL1Q499Z3 407 aa19.97■□□□□ 0.79
HMGN1-214ENST00000482733 NOL9Q5SY16 702 aaKnown RBP19.97■□□□□ 0.79
HMGN1-214ENST00000482733 TTC6Q86TZ1 520 aa19.97■□□□□ 0.79
HMGN1-214ENST00000482733 ERO1BQ86YB8 467 aa19.97■□□□□ 0.79
HMGN1-214ENST00000482733 ZKSCAN4Q969J2 545 aaPredicted RBP19.97■□□□□ 0.79
HMGN1-214ENST00000482733 ZIC5Q96T25 663 aa19.97■□□□□ 0.79
HMGN1-214ENST00000482733 PUS7LQ9H0K6 701 aaKnown RBP19.97■□□□□ 0.79
HMGN1-214ENST00000482733 ATP8A2Q9NTI2 1148 aa19.97■□□□□ 0.79
HMGN1-214ENST00000482733 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.97■□□□□ 0.79
HMGN1-214ENST00000482733 PALD1Q9ULE6 856 aa19.97■□□□□ 0.79
HMGN1-214ENST00000482733 SNCAIPQ9Y6H5 919 aa19.97■□□□□ 0.79
HMGN1-214ENST00000482733 PCNTO95613 3336 aa19.96■□□□□ 0.79
HMGN1-214ENST00000482733 MANSC4A6NHS7 340 aaPredicted RBP19.96■□□□□ 0.79
HMGN1-214ENST00000482733 SPDYE5A6NIY4 337 aa19.96■□□□□ 0.79
HMGN1-214ENST00000482733 CA12O43570 354 aa19.96■□□□□ 0.79
HMGN1-214ENST00000482733 CHGBP05060 677 aa19.96■□□□□ 0.79
HMGN1-214ENST00000482733 INPP5BP32019 993 aa19.96■□□□□ 0.79
HMGN1-214ENST00000482733 INHBEP58166 350 aa19.96■□□□□ 0.79
HMGN1-214ENST00000482733 METTL16Q86W50 562 aaKnown RBP19.96■□□□□ 0.79
HMGN1-214ENST00000482733 OPTNQ96CV9 577 aa19.96■□□□□ 0.79
HMGN1-214ENST00000482733 DDRGK1Q96HY6 314 aa19.96■□□□□ 0.79
HMGN1-214ENST00000482733 TRIM34Q9BYJ4 488 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms