RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 SH3RF3Q8TEJ3 882 aaPredicted RBP22.31■■□□□ 1.16
SMIM4-204ENST00000482728 CSRNP1Q96S65 589 aa22.31■■□□□ 1.16
SMIM4-204ENST00000482728 ZNF341Q9BYN7 854 aa22.31■■□□□ 1.16
SMIM4-204ENST00000482728 MYO5AQ9Y4I1 1855 aaKnown RBP22.3■■□□□ 1.16
SMIM4-204ENST00000482728 FOXN1O15353 648 aa22.3■■□□□ 1.16
SMIM4-204ENST00000482728 CTCFP49711 727 aaPredicted RBP22.3■■□□□ 1.16
SMIM4-204ENST00000482728 SPRYD7Q5W111 196 aa22.3■■□□□ 1.16
SMIM4-204ENST00000482728 CERS3Q8IU89 383 aa22.3■■□□□ 1.16
SMIM4-204ENST00000482728 WRNIP1Q96S55 665 aa22.3■■□□□ 1.16
SMIM4-204ENST00000482728 DDX4Q9NQI0 724 aaKnown RBP22.3■■□□□ 1.16
SMIM4-204ENST00000482728 IRX6P78412 446 aaPredicted RBP22.29■■□□□ 1.16
SMIM4-204ENST00000482728 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.29■■□□□ 1.16
SMIM4-204ENST00000482728 MIGA1Q8NAN2 632 aa22.29■■□□□ 1.16
SMIM4-204ENST00000482728 EDC3Q96F86 508 aaKnown RBP22.29■■□□□ 1.16
SMIM4-204ENST00000482728 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.29■■□□□ 1.16
SMIM4-204ENST00000482728 ELP3Q9H9T3 547 aa22.29■■□□□ 1.16
SMIM4-204ENST00000482728 CA12O43570 354 aa22.28■■□□□ 1.16
SMIM4-204ENST00000482728 PDE6AP16499 860 aa22.28■■□□□ 1.16
SMIM4-204ENST00000482728 DYNLL1P63167 89 aaKnown RBP22.28■■□□□ 1.16
SMIM4-204ENST00000482728 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.28■■□□□ 1.16
SMIM4-204ENST00000482728 WNK4Q96J92 1243 aa22.28■■□□□ 1.16
SMIM4-204ENST00000482728 DDTLA6NHG4 134 aaPredicted RBP22.27■■□□□ 1.16
SMIM4-204ENST00000482728 ZBTB48P10074 688 aaPredicted RBP22.27■■□□□ 1.16
SMIM4-204ENST00000482728 VGLL4Q14135 290 aa22.27■■□□□ 1.16
SMIM4-204ENST00000482728 TGFBRAP1Q8WUH2 860 aa22.27■■□□□ 1.16
SMIM4-204ENST00000482728 RFX7Q2KHR2 1363 aa22.26■■□□□ 1.15
SMIM4-204ENST00000482728 ERC2O15083 957 aa22.26■■□□□ 1.15
SMIM4-204ENST00000482728 SH3BP5LQ7L8J4 393 aa22.26■■□□□ 1.15
SMIM4-204ENST00000482728 ZKSCAN4Q969J2 545 aaPredicted RBP22.26■■□□□ 1.15
SMIM4-204ENST00000482728 OSBPL5Q9H0X9 879 aaPredicted RBP22.26■■□□□ 1.15
SMIM4-204ENST00000482728 TTC41PQ6P2S7 1318 aa22.26■■□□□ 1.15
SMIM4-204ENST00000482728 MAST2Q6P0Q8 1798 aa22.25■■□□□ 1.15
SMIM4-204ENST00000482728 THSD7BQ9C0I4 1608 aa22.25■■□□□ 1.15
SMIM4-204ENST00000482728 MAGEB6P1A0A0J9YX57 407 aa22.25■■□□□ 1.15
SMIM4-204ENST00000482728 SREBF2Q12772 1141 aa22.25■■□□□ 1.15
SMIM4-204ENST00000482728 TSHZ3Q63HK5 1081 aa22.25■■□□□ 1.15
SMIM4-204ENST00000482728 ZSCAN25Q6NSZ9 544 aa22.25■■□□□ 1.15
SMIM4-204ENST00000482728 MAPKAPK5Q8IW41 473 aa22.25■■□□□ 1.15
SMIM4-204ENST00000482728 OPTNQ96CV9 577 aa22.25■■□□□ 1.15
SMIM4-204ENST00000482728 ZNF532Q9HCE3 1301 aa22.25■■□□□ 1.15
SMIM4-204ENST00000482728 MANSC4A6NHS7 340 aaPredicted RBP22.24■■□□□ 1.15
SMIM4-204ENST00000482728 USP5P45974 858 aa22.24■■□□□ 1.15
SMIM4-204ENST00000482728 INHBEP58166 350 aa22.24■■□□□ 1.15
SMIM4-204ENST00000482728 B4GALNT3Q6L9W6 998 aa22.24■■□□□ 1.15
SMIM4-204ENST00000482728 OTUD7AQ8TE49 926 aaPredicted RBP22.24■■□□□ 1.15
SMIM4-204ENST00000482728 DHX36Q9H2U1 1008 aaKnown RBP22.24■■□□□ 1.15
SMIM4-204ENST00000482728 ZNF112Q9UJU3 913 aa22.24■■□□□ 1.15
SMIM4-204ENST00000482728 TRPA1O75762 1119 aa22.23■■□□□ 1.15
SMIM4-204ENST00000482728 GLRX3O76003 335 aaKnown RBP22.23■■□□□ 1.15
SMIM4-204ENST00000482728 IGHDP01880 384 aa22.23■■□□□ 1.15
SMIM4-204ENST00000482728 MX1P20591 662 aa22.23■■□□□ 1.15
SMIM4-204ENST00000482728 INPP5BP32019 993 aa22.23■■□□□ 1.15
SMIM4-204ENST00000482728 TM4SF4P48230 202 aa22.23■■□□□ 1.15
SMIM4-204ENST00000482728 LBX1P52954 281 aa22.23■■□□□ 1.15
SMIM4-204ENST00000482728 ERO1BQ86YB8 467 aa22.23■■□□□ 1.15
SMIM4-204ENST00000482728 SMC5Q8IY18 1101 aa22.23■■□□□ 1.15
SMIM4-204ENST00000482728 ATRNL1Q5VV63 1379 aa22.23■■□□□ 1.15
SMIM4-204ENST00000482728 ADD2P35612 726 aa22.22■■□□□ 1.15
SMIM4-204ENST00000482728 MAP3K10Q02779 954 aa22.22■■□□□ 1.15
SMIM4-204ENST00000482728 OTUD5Q96G74 571 aa22.22■■□□□ 1.15
SMIM4-204ENST00000482728 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.22■■□□□ 1.151e-6■■■□□ 18.5
SMIM4-204ENST00000482728 RNF186Q9NXI6 227 aa22.22■■□□□ 1.15
SMIM4-204ENST00000482728 PI4KBQ9UBF8 816 aa22.22■■□□□ 1.15
SMIM4-204ENST00000482728 TSKSQ9UJT2 592 aa22.22■■□□□ 1.15
SMIM4-204ENST00000482728 DOCK2Q92608 1830 aa22.22■■□□□ 1.15
SMIM4-204ENST00000482728 TCRBV5S4A2TA0A5A2 114 aa22.21■■□□□ 1.15
SMIM4-204ENST00000482728 TBC1D12O60347 775 aa22.21■■□□□ 1.15
SMIM4-204ENST00000482728 HSPA8P11142 646 aaKnown RBP22.21■■□□□ 1.15
SMIM4-204ENST00000482728 CNKSR2Q8WXI2 1034 aa22.21■■□□□ 1.15
SMIM4-204ENST00000482728 RIOK1Q9BRS2 568 aaKnown RBP22.21■■□□□ 1.15
SMIM4-204ENST00000482728 CRNKL1Q9BZJ0 848 aaKnown RBP22.21■■□□□ 1.15
SMIM4-204ENST00000482728 SNCAIPQ9Y6H5 919 aa22.21■■□□□ 1.15
SMIM4-204ENST00000482728 FLT1P17948 1338 aa22.21■■□□□ 1.15
SMIM4-204ENST00000482728 SPDYE5A6NIY4 337 aa22.2■■□□□ 1.14
SMIM4-204ENST00000482728 GJA5P36382 358 aa22.2■■□□□ 1.14
SMIM4-204ENST00000482728 UBE3CQ15386 1083 aa22.2■■□□□ 1.14
SMIM4-204ENST00000482728 LRRFIP1Q32MZ4 808 aaKnown RBP22.2■■□□□ 1.14
SMIM4-204ENST00000482728 FOXP4Q8IVH2 680 aaPredicted RBP22.2■■□□□ 1.14
SMIM4-204ENST00000482728 KBTBD3Q8NAB2 608 aa22.2■■□□□ 1.14
SMIM4-204ENST00000482728 TRIM34Q9BYJ4 488 aa22.2■■□□□ 1.14
SMIM4-204ENST00000482728 LNPKQ9C0E8 428 aa22.2■■□□□ 1.14
SMIM4-204ENST00000482728 PRDM10Q9NQV6 1147 aa22.2■■□□□ 1.14
SMIM4-204ENST00000482728 PICK1Q9NRD5 415 aa22.2■■□□□ 1.14
SMIM4-204ENST00000482728 SAGE1Q9NXZ1 904 aa22.2■■□□□ 1.14
SMIM4-204ENST00000482728 SAP30BPQ9UHR5 308 aaKnown RBP22.2■■□□□ 1.14
SMIM4-204ENST00000482728 PALD1Q9ULE6 856 aa22.2■■□□□ 1.14
SMIM4-204ENST00000482728 PHF20L1A8MW92 1017 aa22.19■■□□□ 1.14
SMIM4-204ENST00000482728 HLA-DOAP06340 250 aa22.19■■□□□ 1.14
SMIM4-204ENST00000482728 GTF2A2P52657 109 aa22.19■■□□□ 1.14
SMIM4-204ENST00000482728 OTUD7BQ6GQQ9 843 aa22.19■■□□□ 1.14
SMIM4-204ENST00000482728 CRACR2BQ8N4Y2 399 aaPredicted RBP22.19■■□□□ 1.14
SMIM4-204ENST00000482728 PI4K2BQ8TCG2 481 aa22.19■■□□□ 1.14
SMIM4-204ENST00000482728 HERC5Q9UII4 1024 aaKnown RBP22.19■■□□□ 1.14
SMIM4-204ENST00000482728 COL2A1P02458 1487 aaPredicted RBP22.19■■□□□ 1.14
SMIM4-204ENST00000482728 CTNND1O60716 968 aaKnown RBP22.18■■□□□ 1.14
SMIM4-204ENST00000482728 PPATQ06203 517 aa22.18■■□□□ 1.14
SMIM4-204ENST00000482728 NOL9Q5SY16 702 aaKnown RBP22.18■■□□□ 1.14
SMIM4-204ENST00000482728 OTOFQ9HC10 1997 aa22.18■■□□□ 1.14
SMIM4-204ENST00000482728 FAM196BA6NMK8 535 aa22.17■■□□□ 1.14
SMIM4-204ENST00000482728 ALDH1A1P00352 501 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms