RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 NFIAQ12857 509 aa18.36■□□□□ 0.53
CCM2-215ENST00000482714 SUPT20HL1Q3ZLR7 823 aa18.36■□□□□ 0.53
CCM2-215ENST00000482714 ESYT1Q9BSJ8 1104 aa18.36■□□□□ 0.53
CCM2-215ENST00000482714 DSCC1Q9BVC3 393 aa18.36■□□□□ 0.53
CCM2-215ENST00000482714 HSPD1P10809 573 aaKnown RBP18.35■□□□□ 0.53
CCM2-215ENST00000482714 KIAA1211Q6ZU35 1233 aa18.35■□□□□ 0.53
CCM2-215ENST00000482714 TTC6Q86TZ1 520 aa18.35■□□□□ 0.53
CCM2-215ENST00000482714 FOXP4Q8IVH2 680 aaPredicted RBP18.35■□□□□ 0.53
CCM2-215ENST00000482714 IFNL3Q8IZI9 196 aa18.35■□□□□ 0.53
CCM2-215ENST00000482714 SMC1BQ8NDV3 1235 aa18.35■□□□□ 0.53
CCM2-215ENST00000482714 OSBPL5Q9H0X9 879 aaPredicted RBP18.35■□□□□ 0.53
CCM2-215ENST00000482714 DCP1AQ9NPI6 582 aaPredicted RBP18.35■□□□□ 0.53
CCM2-215ENST00000482714 ASTN2O75129 1339 aaPredicted RBP18.35■□□□□ 0.53
CCM2-215ENST00000482714 APPP05067 770 aa18.34■□□□□ 0.53
CCM2-215ENST00000482714 POTEIP0CG38 1075 aa18.34■□□□□ 0.53
CCM2-215ENST00000482714 POTEJP0CG39 1038 aa18.34■□□□□ 0.53
CCM2-215ENST00000482714 CACNB3P54284 484 aa18.34■□□□□ 0.53
CCM2-215ENST00000482714 FSTL1Q12841 308 aa18.34■□□□□ 0.53
CCM2-215ENST00000482714 SBK1Q52WX2 424 aa18.34■□□□□ 0.53
CCM2-215ENST00000482714 AMOTL1Q8IY63 956 aa18.34■□□□□ 0.53
CCM2-215ENST00000482714 PI4KBQ9UBF8 816 aa18.34■□□□□ 0.53
CCM2-215ENST00000482714 FLT1P17948 1338 aa18.34■□□□□ 0.53
CCM2-215ENST00000482714 COL2A1P02458 1487 aaPredicted RBP18.34■□□□□ 0.53
CCM2-215ENST00000482714 ECM29Q5VYK3 1845 aa18.33■□□□□ 0.53
CCM2-215ENST00000482714 PRKAB2O43741 272 aa18.33■□□□□ 0.53
CCM2-215ENST00000482714 ZNF589Q86UQ0 364 aaPredicted RBP18.33■□□□□ 0.53
CCM2-215ENST00000482714 USP48Q86UV5 1035 aa18.33■□□□□ 0.53
CCM2-215ENST00000482714 MAPKAPK5Q8IW41 473 aa18.33■□□□□ 0.53
CCM2-215ENST00000482714 SDR42E1Q8WUS8 393 aa18.33■□□□□ 0.53
CCM2-215ENST00000482714 DDX4Q9NQI0 724 aaKnown RBP18.33■□□□□ 0.53
CCM2-215ENST00000482714 CTNNA3Q9UI47 895 aa18.33■□□□□ 0.53
CCM2-215ENST00000482714 ATRNL1Q5VV63 1379 aa18.33■□□□□ 0.53
CCM2-215ENST00000482714 CEP350Q5VT06 3117 aa18.33■□□□□ 0.52
CCM2-215ENST00000482714 TBC1D12O60347 775 aa18.33■□□□□ 0.52
CCM2-215ENST00000482714 ITGBL1O95965 494 aaPredicted RBP18.33■□□□□ 0.52
CCM2-215ENST00000482714 MAP3K10Q02779 954 aa18.33■□□□□ 0.52
CCM2-215ENST00000482714 TCP10Q12799 353 aa18.33■□□□□ 0.52
CCM2-215ENST00000482714 PICALMQ13492 652 aa18.33■□□□□ 0.52
CCM2-215ENST00000482714 MAP1SQ66K74 1059 aaPredicted RBP18.33■□□□□ 0.52
CCM2-215ENST00000482714 CCDC129Q6ZRS4 1044 aa18.33■□□□□ 0.52
CCM2-215ENST00000482714 TEPSINQ96N21 525 aa18.33■□□□□ 0.52
CCM2-215ENST00000482714 MCM9Q9NXL9 1143 aa18.33■□□□□ 0.52
CCM2-215ENST00000482714 ARPP21Q9UBL0 812 aaPredicted RBP18.33■□□□□ 0.52
CCM2-215ENST00000482714 ZMYM6O95789 1325 aa18.32■□□□□ 0.52
CCM2-215ENST00000482714 CNTNAP1P78357 1384 aa18.32■□□□□ 0.52
CCM2-215ENST00000482714 ADAMTSL1Q8N6G6 1762 aa18.32■□□□□ 0.52
CCM2-215ENST00000482714 POLR2AP24928 1970 aaKnown RBP18.32■□□□□ 0.52
CCM2-215ENST00000482714 REC8O95072 547 aa18.32■□□□□ 0.52
CCM2-215ENST00000482714 HLA-DOAP06340 250 aa18.32■□□□□ 0.52
CCM2-215ENST00000482714 NF2P35240 595 aa18.32■□□□□ 0.52
CCM2-215ENST00000482714 ZSCAN29Q8IWY8 852 aaPredicted RBP18.32■□□□□ 0.52
CCM2-215ENST00000482714 NAPBQ9H115 298 aa18.32■□□□□ 0.52
CCM2-215ENST00000482714 FGAP02671 866 aa18.31■□□□□ 0.52
CCM2-215ENST00000482714 POLR3DP05423 398 aaPredicted RBP18.31■□□□□ 0.52
CCM2-215ENST00000482714 METTL16Q86W50 562 aaKnown RBP18.31■□□□□ 0.52
CCM2-215ENST00000482714 MAP4K1Q92918 833 aa18.31■□□□□ 0.52
CCM2-215ENST00000482714 GLIS2Q9BZE0 524 aaPredicted RBP18.31■□□□□ 0.52
CCM2-215ENST00000482714 TMEM39BQ9GZU3 492 aa18.31■□□□□ 0.52
CCM2-215ENST00000482714 EHD4Q9H223 541 aa18.31■□□□□ 0.52
CCM2-215ENST00000482714 USP17L12C9JPN9 530 aa18.3■□□□□ 0.52
CCM2-215ENST00000482714 USP17L21D6R901 530 aa18.3■□□□□ 0.52
CCM2-215ENST00000482714 TDO2P48775 406 aa18.3■□□□□ 0.52
CCM2-215ENST00000482714 C12orf60Q5U649 245 aa18.3■□□□□ 0.52
CCM2-215ENST00000482714 VPS53Q5VIR6 699 aa18.3■□□□□ 0.52
CCM2-215ENST00000482714 DCAF15Q66K64 600 aa18.3■□□□□ 0.52
CCM2-215ENST00000482714 CTR9Q6PD62 1173 aa18.3■□□□□ 0.52
CCM2-215ENST00000482714 ZFPM1Q8IX07 1006 aa18.3■□□□□ 0.52
CCM2-215ENST00000482714 HERC5Q9UII4 1024 aaKnown RBP18.3■□□□□ 0.52
CCM2-215ENST00000482714 DDTLA6NHG4 134 aaPredicted RBP18.29■□□□□ 0.52
CCM2-215ENST00000482714 UNCXA6NJT0 531 aa18.29■□□□□ 0.52
CCM2-215ENST00000482714 NT5C2P49902 561 aa18.29■□□□□ 0.52
CCM2-215ENST00000482714 SH3BP5LQ7L8J4 393 aa18.29■□□□□ 0.52
CCM2-215ENST00000482714 CSRNP1Q96S65 589 aa18.29■□□□□ 0.52
CCM2-215ENST00000482714 IL25Q9H293 177 aa18.29■□□□□ 0.52
CCM2-215ENST00000482714 PALD1Q9ULE6 856 aa18.29■□□□□ 0.52
CCM2-215ENST00000482714 U3KPZ7 1027 aaPredicted RBP18.29■□□□□ 0.52
CCM2-215ENST00000482714 ADM5C9JUS6 153 aa18.28■□□□□ 0.52
CCM2-215ENST00000482714 FOXP2O15409 715 aa18.28■□□□□ 0.52
CCM2-215ENST00000482714 PPP1R12BO60237 982 aaPredicted RBP18.28■□□□□ 0.52
CCM2-215ENST00000482714 SLC3A2P08195 630 aaKnown RBP18.28■□□□□ 0.52
CCM2-215ENST00000482714 FKBP1BP68106 108 aa18.28■□□□□ 0.52
CCM2-215ENST00000482714 CDCA5Q96FF9 252 aa18.28■□□□□ 0.52
CCM2-215ENST00000482714 ZNF287Q9HBT7 754 aa18.28■□□□□ 0.52
CCM2-215ENST00000482714 EPB41L4AQ9HCS5 686 aaPredicted RBP18.28■□□□□ 0.52
CCM2-215ENST00000482714 ANAPC4Q9UJX5 808 aa18.28■□□□□ 0.52
CCM2-215ENST00000482714 PCP11498 1178 aaKnown RBP18.27■□□□□ 0.52
CCM2-215ENST00000482714 NBPF12Q5TAG4 269 aaPredicted RBP18.27■□□□□ 0.52
CCM2-215ENST00000482714 LSG1Q9H089 658 aaKnown RBP18.27■□□□□ 0.52
CCM2-215ENST00000482714 ANO2Q9NQ90 1003 aa18.27■□□□□ 0.52
CCM2-215ENST00000482714 SWAP70Q9UH65 585 aa18.27■□□□□ 0.52
CCM2-215ENST00000482714 SERPINB13Q9UIV8 391 aa18.27■□□□□ 0.52
CCM2-215ENST00000482714 PASKQ96RG2 1323 aa18.27■□□□□ 0.51
CCM2-215ENST00000482714 ZNF213O14771 459 aa18.26■□□□□ 0.51
CCM2-215ENST00000482714 SAP30BPQ9UHR5 308 aaKnown RBP18.26■□□□□ 0.51
CCM2-215ENST00000482714 PLCD1P51178 756 aa18.26■□□□□ 0.51
CCM2-215ENST00000482714 PTH1RQ03431 593 aa18.26■□□□□ 0.51
CCM2-215ENST00000482714 GABPAQ06546 454 aa18.26■□□□□ 0.51
CCM2-215ENST00000482714 MAP3K11Q16584 847 aa18.26■□□□□ 0.51
CCM2-215ENST00000482714 IMMTQ16891 758 aaKnown RBP18.26■□□□□ 0.51
CCM2-215ENST00000482714 SCAF8Q9UPN6 1271 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms