RNA–Protein interactions for RNA: ENST00000482401.6

CAPN8-209, Transcript of calpain 8, humanhuman

TSL 2

Gene CAPN8, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-209ENST00000482401 GJB1P08034 283 aa17.17■□□□□ 0.34
CAPN8-209ENST00000482401 BCRP11274 1271 aa17.17■□□□□ 0.34
CAPN8-209ENST00000482401 CCL5P13501 91 aa17.17■□□□□ 0.34
CAPN8-209ENST00000482401 PTPRAP18433 802 aa17.17■□□□□ 0.34
CAPN8-209ENST00000482401 CTGFP29279 349 aa17.17■□□□□ 0.34
CAPN8-209ENST00000482401 PHKA1P46020 1223 aa17.17■□□□□ 0.34
CAPN8-209ENST00000482401 GJA8P48165 433 aa17.17■□□□□ 0.34
CAPN8-209ENST00000482401 RGS3P49796 1198 aa17.17■□□□□ 0.34
CAPN8-209ENST00000482401 MTFR1Q15390 333 aa17.17■□□□□ 0.34
CAPN8-209ENST00000482401 CCDC102BQ68D86 513 aa17.17■□□□□ 0.34
CAPN8-209ENST00000482401 GPAT2Q6NUI2 795 aa17.17■□□□□ 0.34
CAPN8-209ENST00000482401 PRRT2Q7Z6L0 340 aaPredicted RBP17.17■□□□□ 0.34
CAPN8-209ENST00000482401 FAM163AQ96GL9 167 aaPredicted RBP17.17■□□□□ 0.34
CAPN8-209ENST00000482401 HTATIP2Q9BUP3 242 aa17.17■□□□□ 0.34
CAPN8-209ENST00000482401 COPRSQ9NQ92 184 aa17.17■□□□□ 0.34
CAPN8-209ENST00000482401 AKAP2Q9Y2D5 859 aa17.17■□□□□ 0.34
CAPN8-209ENST00000482401 GAKO14976 1311 aa17.17■□□□□ 0.34
CAPN8-209ENST00000482401 CTNND1O60716 968 aaKnown RBP17.16■□□□□ 0.34
CAPN8-209ENST00000482401 MAP3K10Q02779 954 aa17.16■□□□□ 0.34
CAPN8-209ENST00000482401 ZFPM1Q8IX07 1006 aa17.16■□□□□ 0.34
CAPN8-209ENST00000482401 RNF208Q9H0X6 261 aa17.16■□□□□ 0.34
CAPN8-209ENST00000482401 NOB1Q9ULX3 412 aaKnown RBP17.16■□□□□ 0.34
CAPN8-209ENST00000482401 AFG3L2Q9Y4W6 797 aa17.16■□□□□ 0.34
CAPN8-209ENST00000482401 ZSWIM8A7E2V4 1837 aa17.15■□□□□ 0.34
CAPN8-209ENST00000482401 MAP4K4O95819 1239 aaPredicted RBP17.15■□□□□ 0.34
CAPN8-209ENST00000482401 CYP2C8P10632 490 aa17.15■□□□□ 0.34
CAPN8-209ENST00000482401 PRKCZQ05513 592 aa17.15■□□□□ 0.34
CAPN8-209ENST00000482401 GADL1Q6ZQY3 521 aa17.15■□□□□ 0.34
CAPN8-209ENST00000482401 ABCF2Q9UG63 623 aa17.15■□□□□ 0.34
CAPN8-209ENST00000482401 ATRNL1Q5VV63 1379 aa17.15■□□□□ 0.34
CAPN8-209ENST00000482401 MVPQ14764 893 aaKnown RBP17.14■□□□□ 0.33
CAPN8-209ENST00000482401 PA2G4Q9UQ80 394 aaKnown RBP17.14■□□□□ 0.33
CAPN8-209ENST00000482401 NR2E3Q9Y5X4 410 aa17.14■□□□□ 0.33
CAPN8-209ENST00000482401 ADCY3O60266 1144 aa17.13■□□□□ 0.33
CAPN8-209ENST00000482401 GNAI3P08754 354 aa17.13■□□□□ 0.33
CAPN8-209ENST00000482401 ADORA1P30542 326 aa17.13■□□□□ 0.33
CAPN8-209ENST00000482401 TIMM10P62072 90 aa17.13■□□□□ 0.33
CAPN8-209ENST00000482401 GSTO1P78417 241 aa17.13■□□□□ 0.33
CAPN8-209ENST00000482401 ERICH6Q7L0X2 663 aa17.13■□□□□ 0.33
CAPN8-209ENST00000482401 TRMT2AQ8IZ69 625 aaKnown RBP17.13■□□□□ 0.33
CAPN8-209ENST00000482401 SMCR8Q8TEV9 937 aaPredicted RBP17.13■□□□□ 0.33
CAPN8-209ENST00000482401 SHISA4Q96DD7 197 aa17.13■□□□□ 0.33
CAPN8-209ENST00000482401 MYH2Q9UKX2 1941 aa17.13■□□□□ 0.33
CAPN8-209ENST00000482401 TBC1D12O60347 775 aa17.12■□□□□ 0.33
CAPN8-209ENST00000482401 NPM3O75607 178 aaKnown RBP17.12■□□□□ 0.33
CAPN8-209ENST00000482401 LDHCP07864 332 aa17.12■□□□□ 0.33
CAPN8-209ENST00000482401 BTDP43251 543 aa17.12■□□□□ 0.33
CAPN8-209ENST00000482401 PICALMQ13492 652 aa17.12■□□□□ 0.33
CAPN8-209ENST00000482401 RASGRF1Q13972 1273 aa17.12■□□□□ 0.33
CAPN8-209ENST00000482401 SH3BP5LQ7L8J4 393 aa17.12■□□□□ 0.33
CAPN8-209ENST00000482401 PXYLP1Q8TE99 480 aa17.12■□□□□ 0.33
CAPN8-209ENST00000482401 CDCA7LQ96GN5 454 aa17.12■□□□□ 0.33
CAPN8-209ENST00000482401 TBC1D2Q9BYX2 928 aa17.12■□□□□ 0.33
CAPN8-209ENST00000482401 PNMA3Q9UL41 463 aa17.12■□□□□ 0.33
CAPN8-209ENST00000482401 MROH7-TTC4A0A0A0MT08 1334 aa17.12■□□□□ 0.33
CAPN8-209ENST00000482401 DDTLA6NHG4 134 aaPredicted RBP17.11■□□□□ 0.33
CAPN8-209ENST00000482401 TNPO2O14787 897 aaKnown RBP17.11■□□□□ 0.33
CAPN8-209ENST00000482401 IRF5Q13568 498 aa17.11■□□□□ 0.33
CAPN8-209ENST00000482401 CHRDL2Q6WN34 429 aa17.11■□□□□ 0.33
CAPN8-209ENST00000482401 UBE2Q1Q7Z7E8 422 aa17.11■□□□□ 0.33
CAPN8-209ENST00000482401 U2AF1L4Q8WU68 220 aaKnown RBP17.11■□□□□ 0.33
CAPN8-209ENST00000482401 ARHGAP45Q92619 1136 aa17.11■□□□□ 0.33
CAPN8-209ENST00000482401 COA7Q96BR5 231 aa17.11■□□□□ 0.33
CAPN8-209ENST00000482401 XAGE2Q96GT9 111 aa17.11■□□□□ 0.33
CAPN8-209ENST00000482401 GABRQQ9UN88 632 aa17.11■□□□□ 0.33
CAPN8-209ENST00000482401 AGTPBP1Q9UPW5 1226 aa17.11■□□□□ 0.33
CAPN8-209ENST00000482401 DOCK2Q92608 1830 aa17.11■□□□□ 0.33
CAPN8-209ENST00000482401 RFX7Q2KHR2 1363 aa17.11■□□□□ 0.33
CAPN8-209ENST00000482401 RANBP2P49792 3224 aaKnown RBP17.11■□□□□ 0.33
CAPN8-209ENST00000482401 TRIOBPQ9H2D6 2365 aa17.1■□□□□ 0.33
CAPN8-209ENST00000482401 GPR75-ASB3A0A0A6YYF3 556 aa17.1■□□□□ 0.33
CAPN8-209ENST00000482401 A0A1B0GUL7 405 aa17.1■□□□□ 0.33
CAPN8-209ENST00000482401 TRIM75PA6NK02 468 aa17.1■□□□□ 0.33
CAPN8-209ENST00000482401 SRGAP3O43295 1099 aa17.1■□□□□ 0.33
CAPN8-209ENST00000482401 SGPL1O95470 568 aa17.1■□□□□ 0.33
CAPN8-209ENST00000482401 FLT3LGP49771 235 aa17.1■□□□□ 0.33
CAPN8-209ENST00000482401 MECOMQ03112 1051 aa17.1■□□□□ 0.33
CAPN8-209ENST00000482401 PABPC4Q13310 644 aaKnown RBP eCLIP17.1■□□□□ 0.33
CAPN8-209ENST00000482401 GORABQ5T7V8 394 aa17.1■□□□□ 0.33
CAPN8-209ENST00000482401 MEIS3Q99687 375 aa17.1■□□□□ 0.33
CAPN8-209ENST00000482401 OSBPL5Q9H0X9 879 aaPredicted RBP17.1■□□□□ 0.33
CAPN8-209ENST00000482401 FARP2O94887 1054 aaPredicted RBP17.09■□□□□ 0.33
CAPN8-209ENST00000482401 TFRCP02786 760 aaKnown RBP17.09■□□□□ 0.33
CAPN8-209ENST00000482401 TFCP2Q12800 502 aa17.09■□□□□ 0.33
CAPN8-209ENST00000482401 PROCA1Q8NCQ7 364 aaPredicted RBP17.09■□□□□ 0.33
CAPN8-209ENST00000482401 NEUROD6Q96NK8 337 aa17.09■□□□□ 0.33
CAPN8-209ENST00000482401 UNC93B1Q9H1C4 597 aa17.09■□□□□ 0.33
CAPN8-209ENST00000482401 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.09■□□□□ 0.33
CAPN8-209ENST00000482401 DDX4Q9NQI0 724 aaKnown RBP17.09■□□□□ 0.33
CAPN8-209ENST00000482401 MGAMO43451 1857 aa17.09■□□□□ 0.33
CAPN8-209ENST00000482401 INHAP05111 366 aa17.08■□□□□ 0.32
CAPN8-209ENST00000482401 MTX1Q13505 466 aa17.08■□□□□ 0.32
CAPN8-209ENST00000482401 SZT2Q5T011 3432 aa17.08■□□□□ 0.32
CAPN8-209ENST00000482401 IPO8O15397 1037 aaKnown RBP17.07■□□□□ 0.32
CAPN8-209ENST00000482401 GCLCP48506 637 aaPredicted RBP17.07■□□□□ 0.32
CAPN8-209ENST00000482401 RHBDL3P58872 404 aa17.07■□□□□ 0.32
CAPN8-209ENST00000482401 FAM110CQ1W6H9 321 aa17.07■□□□□ 0.32
CAPN8-209ENST00000482401 ANKRD13CQ8N6S4 541 aa17.07■□□□□ 0.32
CAPN8-209ENST00000482401 SPATA5Q8NB90 893 aa17.07■□□□□ 0.32
CAPN8-209ENST00000482401 ZNF280CQ8ND82 737 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms