RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 GJA5P36382 358 aa22.84■■□□□ 1.25
HSPG2-210ENST00000481644 BAG3O95817 575 aa22.83■■□□□ 1.25
HSPG2-210ENST00000481644 CRBNQ96SW2 442 aa22.83■■□□□ 1.25
HSPG2-210ENST00000481644 INHBEP58166 350 aa22.82■■□□□ 1.24
HSPG2-210ENST00000481644 TEX11Q8IYF3 940 aa22.82■■□□□ 1.24
HSPG2-210ENST00000481644 ZKSCAN4Q969J2 545 aaPredicted RBP22.82■■□□□ 1.24
HSPG2-210ENST00000481644 ANTXR1Q9H6X2 564 aa22.82■■□□□ 1.24
HSPG2-210ENST00000481644 AATFQ9NY61 560 aaKnown RBP eCLIP22.82■■□□□ 1.24
HSPG2-210ENST00000481644 SNCAIPQ9Y6H5 919 aa22.82■■□□□ 1.24
HSPG2-210ENST00000481644 NPM3O75607 178 aaKnown RBP22.81■■□□□ 1.24
HSPG2-210ENST00000481644 PLCG2P16885 1265 aa22.81■■□□□ 1.24
HSPG2-210ENST00000481644 IFFO2Q5TF58 517 aa22.81■■□□□ 1.24
HSPG2-210ENST00000481644 SH3BP5LQ7L8J4 393 aa22.81■■□□□ 1.24
HSPG2-210ENST00000481644 ADGRA1Q86SQ6 560 aa22.81■■□□□ 1.24
HSPG2-210ENST00000481644 SH3RF3Q8TEJ3 882 aaPredicted RBP22.81■■□□□ 1.24
HSPG2-210ENST00000481644 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.81■■□□□ 1.24
HSPG2-210ENST00000481644 CNKSR2Q8WXI2 1034 aa22.81■■□□□ 1.24
HSPG2-210ENST00000481644 OTUD5Q96G74 571 aa22.81■■□□□ 1.24
HSPG2-210ENST00000481644 DCTPP1Q9H773 170 aa22.81■■□□□ 1.24
HSPG2-210ENST00000481644 PCDHB15Q9Y5E8 787 aa22.81■■□□□ 1.24
HSPG2-210ENST00000481644 CDK5RAP2Q96SN8 1893 aa22.81■■□□□ 1.24
HSPG2-210ENST00000481644 ATRNL1Q5VV63 1379 aa22.8■■□□□ 1.24
HSPG2-210ENST00000481644 DDTLA6NHG4 134 aaPredicted RBP22.8■■□□□ 1.24
HSPG2-210ENST00000481644 SMARCA5O60264 1052 aaPredicted RBP22.8■■□□□ 1.24
HSPG2-210ENST00000481644 CYP7A1P22680 504 aa22.8■■□□□ 1.24
HSPG2-210ENST00000481644 INPP5BP32019 993 aa22.8■■□□□ 1.24
HSPG2-210ENST00000481644 MAP3K12Q12852 859 aa22.8■■□□□ 1.24
HSPG2-210ENST00000481644 TTF1Q15361 905 aaPredicted RBP22.8■■□□□ 1.24
HSPG2-210ENST00000481644 DNAJC2Q99543 621 aaKnown RBP22.8■■□□□ 1.24
HSPG2-210ENST00000481644 ZNF112Q9UJU3 913 aa22.8■■□□□ 1.24
HSPG2-210ENST00000481644 FOCADQ5VW36 1801 aa22.8■■□□□ 1.24
HSPG2-210ENST00000481644 SPDYE5A6NIY4 337 aa22.79■■□□□ 1.24
HSPG2-210ENST00000481644 PPP4CP60510 307 aa22.79■■□□□ 1.24
HSPG2-210ENST00000481644 ERO1BQ86YB8 467 aa22.79■■□□□ 1.24
HSPG2-210ENST00000481644 IFNL1Q8IU54 200 aa22.79■■□□□ 1.24
HSPG2-210ENST00000481644 MAGEB6Q8N7X4 407 aa22.79■■□□□ 1.24
HSPG2-210ENST00000481644 TBC1D8O95759 1140 aa22.78■■□□□ 1.24
HSPG2-210ENST00000481644 ALDH1A1P00352 501 aa22.78■■□□□ 1.24
HSPG2-210ENST00000481644 OSBPL5Q9H0X9 879 aaPredicted RBP22.78■■□□□ 1.24
HSPG2-210ENST00000481644 COL2A1P02458 1487 aaPredicted RBP22.78■■□□□ 1.24
HSPG2-210ENST00000481644 IGF2BP3O00425 579 aaKnown RBP eCLIP22.77■■□□□ 1.24
HSPG2-210ENST00000481644 GOLIM4O00461 696 aa22.77■■□□□ 1.24
HSPG2-210ENST00000481644 TMED8Q6PL24 325 aaPredicted RBP22.77■■□□□ 1.24
HSPG2-210ENST00000481644 ATP5JP18859 108 aa22.76■■□□□ 1.23
HSPG2-210ENST00000481644 GTF2A2P52657 109 aa22.76■■□□□ 1.23
HSPG2-210ENST00000481644 OTUD7BQ6GQQ9 843 aa22.76■■□□□ 1.23
HSPG2-210ENST00000481644 MS4A4AQ96JQ5 239 aa22.76■■□□□ 1.23
HSPG2-210ENST00000481644 BOLA2Q9H3K6 86 aa22.76■■□□□ 1.23
HSPG2-210ENST00000481644 TESPA1A2RU30 521 aaPredicted RBP22.75■■□□□ 1.23
HSPG2-210ENST00000481644 DYNLL1P63167 89 aaKnown RBP22.75■■□□□ 1.23
HSPG2-210ENST00000481644 MAP3K10Q02779 954 aa22.75■■□□□ 1.23
HSPG2-210ENST00000481644 PPIL2Q13356 520 aa22.75■■□□□ 1.23
HSPG2-210ENST00000481644 NOL9Q5SY16 702 aaKnown RBP22.75■■□□□ 1.23
HSPG2-210ENST00000481644 MIGA1Q8NAN2 632 aa22.75■■□□□ 1.23
HSPG2-210ENST00000481644 TGFBRAP1Q8WUH2 860 aa22.75■■□□□ 1.23
HSPG2-210ENST00000481644 CCL15-CCL14A0A0B4J2E2 113 aa22.74■■□□□ 1.23
HSPG2-210ENST00000481644 PHF20L1A8MW92 1017 aa22.74■■□□□ 1.23
HSPG2-210ENST00000481644 PPATQ06203 517 aa22.74■■□□□ 1.23
HSPG2-210ENST00000481644 CCL15Q16663 113 aa22.74■■□□□ 1.23
HSPG2-210ENST00000481644 CERS3Q8IU89 383 aa22.74■■□□□ 1.23
HSPG2-210ENST00000481644 MAPKAPK5Q8IW41 473 aa22.74■■□□□ 1.23
HSPG2-210ENST00000481644 EDC3Q96F86 508 aaKnown RBP22.74■■□□□ 1.23
HSPG2-210ENST00000481644 CFHR5Q9BXR6 569 aa22.74■■□□□ 1.23
HSPG2-210ENST00000481644 PAG1Q9NWQ8 432 aa22.74■■□□□ 1.23
HSPG2-210ENST00000481644 DOCK1Q14185 1865 aa22.74■■□□□ 1.23
HSPG2-210ENST00000481644 FLT1P17948 1338 aa22.74■■□□□ 1.23
HSPG2-210ENST00000481644 IRF6O14896 467 aa22.73■■□□□ 1.23
HSPG2-210ENST00000481644 SLURP2P0DP57 97 aa22.73■■□□□ 1.23
HSPG2-210ENST00000481644 SLC9C2Q5TAH2 1124 aa22.73■■□□□ 1.23
HSPG2-210ENST00000481644 BRI3BPQ8WY22 251 aa22.73■■□□□ 1.23
HSPG2-210ENST00000481644 HAUS7Q99871 368 aa22.73■■□□□ 1.23
HSPG2-210ENST00000481644 PTPN18Q99952 460 aa22.73■■□□□ 1.23
HSPG2-210ENST00000481644 TBC1D12O60347 775 aa22.72■■□□□ 1.23
HSPG2-210ENST00000481644 PDE6AP16499 860 aa22.72■■□□□ 1.23
HSPG2-210ENST00000481644 SNAPC2Q13487 334 aa22.72■■□□□ 1.23
HSPG2-210ENST00000481644 SCYL3Q8IZE3 742 aa22.72■■□□□ 1.23
HSPG2-210ENST00000481644 DHX36Q9H2U1 1008 aaKnown RBP22.72■■□□□ 1.23
HSPG2-210ENST00000481644 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.72■■□□□ 1.23
HSPG2-210ENST00000481644 PICK1Q9NRD5 415 aa22.72■■□□□ 1.23
HSPG2-210ENST00000481644 ECHDC1Q9NTX5 307 aa22.72■■□□□ 1.23
HSPG2-210ENST00000481644 MYH7P12883 1935 aa22.72■■□□□ 1.23
HSPG2-210ENST00000481644 SIPA1L1O43166 1804 aa22.71■■□□□ 1.23
HSPG2-210ENST00000481644 MYH1P12882 1939 aa22.71■■□□□ 1.23
HSPG2-210ENST00000481644 FAM196BA6NMK8 535 aa22.71■■□□□ 1.23
HSPG2-210ENST00000481644 GPR25O00155 361 aa22.71■■□□□ 1.23
HSPG2-210ENST00000481644 CETPP11597 493 aa22.71■■□□□ 1.23
HSPG2-210ENST00000481644 NOM1Q5C9Z4 860 aaKnown RBP22.71■■□□□ 1.23
HSPG2-210ENST00000481644 GPATCH3Q96I76 525 aa22.71■■□□□ 1.23
HSPG2-210ENST00000481644 R3HDMLQ9H3Y0 253 aa22.71■■□□□ 1.23
HSPG2-210ENST00000481644 CTNND1O60716 968 aaKnown RBP22.7■■□□□ 1.22
HSPG2-210ENST00000481644 USP5P45974 858 aa22.7■■□□□ 1.22
HSPG2-210ENST00000481644 ZNF296Q8WUU4 475 aaPredicted RBP22.7■■□□□ 1.22
HSPG2-210ENST00000481644 PI4KBQ9UBF8 816 aa22.7■■□□□ 1.22
HSPG2-210ENST00000481644 ZNF532Q9HCE3 1301 aa22.7■■□□□ 1.22
HSPG2-210ENST00000481644 ATAD5Q96QE3 1844 aa22.69■■□□□ 1.22
HSPG2-210ENST00000481644 MAGEB6P1A0A0J9YX57 407 aa22.69■■□□□ 1.22
HSPG2-210ENST00000481644 DGKZQ13574 1117 aa22.69■■□□□ 1.22
HSPG2-210ENST00000481644 AAMPQ13685 434 aa22.69■■□□□ 1.22
HSPG2-210ENST00000481644 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.69■■□□□ 1.224e-15■■■■■ 42
HSPG2-210ENST00000481644 SAP30BPQ9UHR5 308 aaKnown RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms