RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 ZSCAN16Q9H4T2 348 aaPredicted RBP12.92□□□□□ -0.34
TRIM27-205ENST00000481474 GRPEL1Q9HAV7 217 aa12.92□□□□□ -0.34
TRIM27-205ENST00000481474 ANGPTL3Q9Y5C1 460 aa12.92□□□□□ -0.34
TRIM27-205ENST00000481474 NVLO15381 856 aaKnown RBP12.92□□□□□ -0.34
TRIM27-205ENST00000481474 EEPD1Q7L9B9 569 aa12.92□□□□□ -0.34
TRIM27-205ENST00000481474 ZGPATQ8N5A5 531 aaKnown RBP12.92□□□□□ -0.34
TRIM27-205ENST00000481474 WDR66Q8TBY9 1149 aa12.92□□□□□ -0.34
TRIM27-205ENST00000481474 GCC1Q96CN9 775 aa12.92□□□□□ -0.34
TRIM27-205ENST00000481474 RILPQ96NA2 401 aa12.92□□□□□ -0.34
TRIM27-205ENST00000481474 EYA3Q99504 573 aa12.92□□□□□ -0.34
TRIM27-205ENST00000481474 ALG1Q9BT22 464 aa12.92□□□□□ -0.34
TRIM27-205ENST00000481474 ARHGEF10LQ9HCE6 1279 aa12.92□□□□□ -0.34
TRIM27-205ENST00000481474 SMTNP53814 917 aa12.92□□□□□ -0.34
TRIM27-205ENST00000481474 ARHGEF2Q92974 986 aaKnown RBP12.92□□□□□ -0.34
TRIM27-205ENST00000481474 FMNL1O95466 1100 aaPredicted RBP12.92□□□□□ -0.34
TRIM27-205ENST00000481474 BAG6P46379 1132 aa12.92□□□□□ -0.34
TRIM27-205ENST00000481474 JADE1Q6IE81 842 aa12.92□□□□□ -0.34
TRIM27-205ENST00000481474 PDZD8Q8NEN9 1154 aa12.92□□□□□ -0.34
TRIM27-205ENST00000481474 TNNI1P19237 187 aa12.92□□□□□ -0.34
TRIM27-205ENST00000481474 TEX11Q8IYF3 940 aa12.92□□□□□ -0.34
TRIM27-205ENST00000481474 KIF18AQ8NI77 898 aa12.92□□□□□ -0.34
TRIM27-205ENST00000481474 KCNG4Q8TDN1 519 aa12.92□□□□□ -0.34
TRIM27-205ENST00000481474 PARP2Q9UGN5 583 aa12.92□□□□□ -0.34
TRIM27-205ENST00000481474 NEMP1O14524 444 aa12.92□□□□□ -0.34
TRIM27-205ENST00000481474 KRT79Q5XKE5 535 aa12.92□□□□□ -0.34
TRIM27-205ENST00000481474 DPP8Q6V1X1 898 aaPredicted RBP12.92□□□□□ -0.34
TRIM27-205ENST00000481474 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRIM27-205ENST00000481474 PDS5BQ9NTI5 1447 aa12.91□□□□□ -0.34
TRIM27-205ENST00000481474 HABP4Q5JVS0 413 aaKnown RBP12.91□□□□□ -0.34
TRIM27-205ENST00000481474 NCOA7Q8NI08 942 aa12.91□□□□□ -0.34
TRIM27-205ENST00000481474 ANKRD24Q8TF21 1146 aa12.91□□□□□ -0.34
TRIM27-205ENST00000481474 CCNL1Q9UK58 526 aaPredicted RBP12.91□□□□□ -0.34
TRIM27-205ENST00000481474 PPP2R5EQ16537 467 aa12.91□□□□□ -0.34
TRIM27-205ENST00000481474 NEK11Q8NG66 645 aa12.91□□□□□ -0.34
TRIM27-205ENST00000481474 CIB2O75838 187 aa12.91□□□□□ -0.34
TRIM27-205ENST00000481474 KRT81Q14533 505 aa12.91□□□□□ -0.34
TRIM27-205ENST00000481474 COG4Q9H9E3 785 aa12.91□□□□□ -0.34
TRIM27-205ENST00000481474 SYTL2Q9HCH5 934 aa12.91□□□□□ -0.34
TRIM27-205ENST00000481474 SUPT3HB4E1H0 165 aa12.91□□□□□ -0.34
TRIM27-205ENST00000481474 GJB2P29033 226 aa12.91□□□□□ -0.34
TRIM27-205ENST00000481474 MGARPQ8TDB4 240 aa12.91□□□□□ -0.34
TRIM27-205ENST00000481474 ATP6V1E2Q96A05 226 aa12.91□□□□□ -0.34
TRIM27-205ENST00000481474 XAB2Q9HCS7 855 aaKnown RBP12.91□□□□□ -0.34
TRIM27-205ENST00000481474 DDAH1O94760 285 aa12.91□□□□□ -0.34
TRIM27-205ENST00000481474 MCM3P25205 808 aa12.91□□□□□ -0.34
TRIM27-205ENST00000481474 UBXN1Q04323 297 aa12.91□□□□□ -0.34
TRIM27-205ENST00000481474 DOK7Q18PE1 504 aa12.91□□□□□ -0.34
TRIM27-205ENST00000481474 STMN2Q93045 179 aa12.91□□□□□ -0.34
TRIM27-205ENST00000481474 FGD4Q96M96 766 aa12.91□□□□□ -0.34
TRIM27-205ENST00000481474 CASQ2O14958 399 aaPredicted RBP12.9□□□□□ -0.34
TRIM27-205ENST00000481474 SLC9C2Q5TAH2 1124 aa12.9□□□□□ -0.34
TRIM27-205ENST00000481474 ARHGEF16Q5VV41 709 aa12.9□□□□□ -0.34
TRIM27-205ENST00000481474 PRKRIP1Q9H875 184 aaPredicted RBP12.9□□□□□ -0.34
TRIM27-205ENST00000481474 FBLN1P23142 703 aa12.9□□□□□ -0.34
TRIM27-205ENST00000481474 HPDP32754 393 aaPredicted RBP12.9□□□□□ -0.34
TRIM27-205ENST00000481474 APOBRQ0VD83 1088 aa12.9□□□□□ -0.34
TRIM27-205ENST00000481474 HSP90AA5PQ58FG0 334 aa12.9□□□□□ -0.34
TRIM27-205ENST00000481474 CNBD1Q8NA66 436 aa12.9□□□□□ -0.34
TRIM27-205ENST00000481474 OTULINQ96BN8 352 aa12.9□□□□□ -0.34
TRIM27-205ENST00000481474 SLC5A4Q9NY91 659 aa12.9□□□□□ -0.34
TRIM27-205ENST00000481474 ZBTB43O43298 467 aa12.9□□□□□ -0.34
TRIM27-205ENST00000481474 MX1P20591 662 aa12.9□□□□□ -0.34
TRIM27-205ENST00000481474 VCPP55072 806 aaKnown RBP12.9□□□□□ -0.34
TRIM27-205ENST00000481474 HAUS2Q9NVX0 235 aa12.9□□□□□ -0.34
TRIM27-205ENST00000481474 ANAPC5Q9UJX4 755 aa12.9□□□□□ -0.34
TRIM27-205ENST00000481474 TYW5A2RUC4 315 aaKnown RBP12.9□□□□□ -0.34
TRIM27-205ENST00000481474 ELF1P32519 619 aa12.9□□□□□ -0.34
TRIM27-205ENST00000481474 RSRC2Q7L4I2 434 aaKnown RBP12.9□□□□□ -0.34
TRIM27-205ENST00000481474 CDAN1Q8IWY9 1227 aa12.9□□□□□ -0.34
TRIM27-205ENST00000481474 EVI5LQ96CN4 794 aa12.9□□□□□ -0.34
TRIM27-205ENST00000481474 SPDL1Q96EA4 605 aa12.9□□□□□ -0.34
TRIM27-205ENST00000481474 VMP1Q96GC9 406 aa12.9□□□□□ -0.34
TRIM27-205ENST00000481474 MAGEB10Q96LZ2 347 aaPredicted RBP12.9□□□□□ -0.34
TRIM27-205ENST00000481474 GCNAQ96QF7 691 aa12.9□□□□□ -0.34
TRIM27-205ENST00000481474 LRRC27Q9C0I9 530 aa12.9□□□□□ -0.34
TRIM27-205ENST00000481474 NYXQ9GZU5 481 aa12.9□□□□□ -0.34
TRIM27-205ENST00000481474 GUCA1BQ9UMX6 200 aa12.9□□□□□ -0.34
TRIM27-205ENST00000481474 CLCA2Q9UQC9 943 aa12.9□□□□□ -0.34
TRIM27-205ENST00000481474 ESPNB1AK53 854 aa12.9□□□□□ -0.35
TRIM27-205ENST00000481474 ALDH3A1P30838 453 aa12.9□□□□□ -0.35
TRIM27-205ENST00000481474 TRIM14Q14142 442 aa12.9□□□□□ -0.35
TRIM27-205ENST00000481474 FAM102BQ5T8I3 360 aa12.9□□□□□ -0.35
TRIM27-205ENST00000481474 CC2D2BQ6DHV5 1058 aa12.9□□□□□ -0.35
TRIM27-205ENST00000481474 VPS18Q9P253 973 aa12.9□□□□□ -0.35
TRIM27-205ENST00000481474 AKT3Q9Y243 479 aa12.9□□□□□ -0.35
TRIM27-205ENST00000481474 DAAM1Q9Y4D1 1078 aa12.9□□□□□ -0.35
TRIM27-205ENST00000481474 FANCIQ9NVI1 1328 aa12.89□□□□□ -0.35
TRIM27-205ENST00000481474 ARHGAP5Q13017 1502 aa12.89□□□□□ -0.35
TRIM27-205ENST00000481474 SEL1L2Q5TEA6 688 aa12.89□□□□□ -0.35
TRIM27-205ENST00000481474 CPLX4Q7Z7G2 160 aa12.89□□□□□ -0.35
TRIM27-205ENST00000481474 TSC1Q92574 1164 aa12.89□□□□□ -0.35
TRIM27-205ENST00000481474 PHF8Q9UPP1 1060 aa12.89□□□□□ -0.35
TRIM27-205ENST00000481474 ARHGEF35A5YM69 484 aa12.89□□□□□ -0.35
TRIM27-205ENST00000481474 GLRX3O76003 335 aaKnown RBP12.89□□□□□ -0.35
TRIM27-205ENST00000481474 PPP4R1Q8TF05 950 aa12.89□□□□□ -0.35
TRIM27-205ENST00000481474 DENND2CQ68D51 928 aa12.89□□□□□ -0.35
TRIM27-205ENST00000481474 FASTKD5Q7L8L6 764 aaKnown RBP12.89□□□□□ -0.35
TRIM27-205ENST00000481474 UBASH3AP57075 661 aa12.89□□□□□ -0.35
TRIM27-205ENST00000481474 IRX4P78413 519 aa12.89□□□□□ -0.35
TRIM27-205ENST00000481474 NME9Q86XW9 330 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms