RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 TRAK1Q9UPV9 953 aa9.95□□□□□ -0.82
LSM5-210ENST00000480956 FRMD4BQ9Y2L6 1034 aa9.95□□□□□ -0.82
LSM5-210ENST00000480956 CDK2AP1O14519 115 aa9.94□□□□□ -0.82
LSM5-210ENST00000480956 TLR3O15455 904 aaKnown RBP9.94□□□□□ -0.82
LSM5-210ENST00000480956 FBXO24O75426 580 aa9.94□□□□□ -0.82
LSM5-210ENST00000480956 ABLIM3O94929 683 aa9.94□□□□□ -0.82
LSM5-210ENST00000480956 GNRH1P01148 92 aa9.94□□□□□ -0.82
LSM5-210ENST00000480956 U2AF1L5P0DN76 240 aaPredicted RBP9.94□□□□□ -0.82
LSM5-210ENST00000480956 U2AF1Q01081 240 aaKnown RBP eCLIP9.94□□□□□ -0.82
LSM5-210ENST00000480956 CTC1Q2NKJ3 1217 aa9.94□□□□□ -0.82
LSM5-210ENST00000480956 GET4Q7L5D6 327 aaPredicted RBP9.94□□□□□ -0.82
LSM5-210ENST00000480956 LRRTM3Q86VH5 581 aa9.94□□□□□ -0.82
LSM5-210ENST00000480956 FAM178BQ8IXR5 827 aa9.94□□□□□ -0.82
LSM5-210ENST00000480956 ERP27Q96DN0 273 aa9.94□□□□□ -0.82
LSM5-210ENST00000480956 IFT122Q9HBG6 1241 aa9.94□□□□□ -0.82
LSM5-210ENST00000480956 ANKIB1Q9P2G1 1089 aa9.94□□□□□ -0.82
LSM5-210ENST00000480956 ANO9A1A5B4 782 aa9.93□□□□□ -0.82
LSM5-210ENST00000480956 PIP5K1CO60331 668 aa9.93□□□□□ -0.82
LSM5-210ENST00000480956 ZNF165P49910 485 aa9.93□□□□□ -0.82
LSM5-210ENST00000480956 LSRQ86X29 649 aaPredicted RBP9.93□□□□□ -0.82
LSM5-210ENST00000480956 NBPF15Q8N660 670 aa9.93□□□□□ -0.82
LSM5-210ENST00000480956 ZBTB38Q8NAP3 1195 aaPredicted RBP9.93□□□□□ -0.82
LSM5-210ENST00000480956 SNRNP27Q8WVK2 155 aaKnown RBP9.93□□□□□ -0.82
LSM5-210ENST00000480956 SKA1Q96BD8 255 aa9.93□□□□□ -0.82
LSM5-210ENST00000480956 TRMT2BQ96GJ1 504 aaKnown RBP9.93□□□□□ -0.82
LSM5-210ENST00000480956 PHACTR1Q9C0D0 580 aa9.93□□□□□ -0.82
LSM5-210ENST00000480956 MUC3BQ9H195 1237 aa9.93□□□□□ -0.82
LSM5-210ENST00000480956 NCOA5Q9HCD5 579 aaKnown RBP9.93□□□□□ -0.82
LSM5-210ENST00000480956 PLCB1Q9NQ66 1216 aa9.93□□□□□ -0.82
LSM5-210ENST00000480956 STRN4Q9NRL3 753 aa9.93□□□□□ -0.82
LSM5-210ENST00000480956 C9orf78Q9NZ63 289 aaPredicted RBP9.93□□□□□ -0.82
LSM5-210ENST00000480956 HDAC9Q9UKV0 1011 aa9.93□□□□□ -0.82
LSM5-210ENST00000480956 SPEF1Q9Y4P9 236 aa9.93□□□□□ -0.82
LSM5-210ENST00000480956 NBNO60934 754 aa9.93□□□□□ -0.82
LSM5-210ENST00000480956 SERPINB3P29508 390 aa9.93□□□□□ -0.82
LSM5-210ENST00000480956 FCGRTP55899 365 aa9.93□□□□□ -0.82
LSM5-210ENST00000480956 TEAD4Q15561 434 aa9.93□□□□□ -0.82
LSM5-210ENST00000480956 PDE12Q6L8Q7 609 aaKnown RBP9.93□□□□□ -0.82
LSM5-210ENST00000480956 LEO1Q8WVC0 666 aaPredicted RBP9.93□□□□□ -0.82
LSM5-210ENST00000480956 MPP4Q96JB8 637 aa9.93□□□□□ -0.82
LSM5-210ENST00000480956 LRRC3Q9BY71 257 aa9.93□□□□□ -0.82
LSM5-210ENST00000480956 LUC7LQ9NQ29 371 aaKnown RBP9.93□□□□□ -0.82
LSM5-210ENST00000480956 FNDC3AQ9Y2H6 1198 aaKnown RBP9.93□□□□□ -0.82
LSM5-210ENST00000480956 GPR39O43194 453 aa9.92□□□□□ -0.82
LSM5-210ENST00000480956 CT47B1P0C2W7 299 aaPredicted RBP9.92□□□□□ -0.82
LSM5-210ENST00000480956 IMPDH2P12268 514 aa9.92□□□□□ -0.82
LSM5-210ENST00000480956 PHKG2P15735 406 aa9.92□□□□□ -0.82
LSM5-210ENST00000480956 TERF1P54274 439 aa9.92□□□□□ -0.82
LSM5-210ENST00000480956 PUM3Q15397 648 aaKnown RBP9.92□□□□□ -0.82
LSM5-210ENST00000480956 FNDC3BQ53EP0 1204 aaKnown RBP9.92□□□□□ -0.82
LSM5-210ENST00000480956 HYIQ5T013 277 aa9.92□□□□□ -0.82
LSM5-210ENST00000480956 MMS22LQ6ZRQ5 1243 aa9.92□□□□□ -0.82
LSM5-210ENST00000480956 LHFPL2Q6ZUX7 228 aa9.92□□□□□ -0.82
LSM5-210ENST00000480956 EEPD1Q7L9B9 569 aa9.92□□□□□ -0.82
LSM5-210ENST00000480956 CYP2U1Q7Z449 544 aa9.92□□□□□ -0.82
LSM5-210ENST00000480956 SUGP1Q8IWZ8 645 aaKnown RBP9.92□□□□□ -0.82
LSM5-210ENST00000480956 IFNL2Q8IZJ0 200 aa9.92□□□□□ -0.82
LSM5-210ENST00000480956 GLIS3Q8NEA6 775 aa9.92□□□□□ -0.82
LSM5-210ENST00000480956 PI4K2BQ8TCG2 481 aa9.92□□□□□ -0.82
LSM5-210ENST00000480956 USP33Q8TEY7 942 aa9.92□□□□□ -0.82
LSM5-210ENST00000480956 PUS7LQ9H0K6 701 aaKnown RBP9.92□□□□□ -0.82
LSM5-210ENST00000480956 CLIC5Q9NZA1 410 aa9.92□□□□□ -0.82
LSM5-210ENST00000480956 EVLQ9UI08 416 aaPredicted RBP9.92□□□□□ -0.82
LSM5-210ENST00000480956 TRHDEQ9UKU6 1024 aa9.92□□□□□ -0.82
LSM5-210ENST00000480956 ZNRF3Q9ULT6 936 aa9.92□□□□□ -0.82
LSM5-210ENST00000480956 AKAP2Q9Y2D5 859 aa9.92□□□□□ -0.82
LSM5-210ENST00000480956 IPPQ9Y573 584 aa9.92□□□□□ -0.82
LSM5-210ENST00000480956 KLRG2A4D1S0 409 aaPredicted RBP9.91□□□□□ -0.82
LSM5-210ENST00000480956 PLD2O14939 933 aa9.91□□□□□ -0.82
LSM5-210ENST00000480956 HIP1RO75146 1068 aa9.91□□□□□ -0.82
LSM5-210ENST00000480956 COBLL1Q53SF7 1204 aa9.91□□□□□ -0.82
LSM5-210ENST00000480956 MRM1Q6IN84 353 aaKnown RBP9.91□□□□□ -0.82
LSM5-210ENST00000480956 TOGARAM2Q6ZUX3 1019 aa9.91□□□□□ -0.82
LSM5-210ENST00000480956 ADCY3O60266 1144 aa9.9□□□□□ -0.82
LSM5-210ENST00000480956 CCNFP41002 786 aa9.9□□□□□ -0.82
LSM5-210ENST00000480956 CHAF1AQ13111 956 aaPredicted RBP9.9□□□□□ -0.82
LSM5-210ENST00000480956 BIRC3Q13489 604 aa9.9□□□□□ -0.82
LSM5-210ENST00000480956 SAFBQ15424 915 aaKnown RBP eCLIP9.9□□□□□ -0.82
LSM5-210ENST00000480956 CWF19L2Q2TBE0 894 aaKnown RBP9.9□□□□□ -0.82
LSM5-210ENST00000480956 PPM1KQ8N3J5 372 aa9.9□□□□□ -0.82
LSM5-210ENST00000480956 FBXO27Q8NI29 283 aa9.9□□□□□ -0.82
LSM5-210ENST00000480956 ZDHHC1Q8WTX9 485 aa9.9□□□□□ -0.82
LSM5-210ENST00000480956 L3MBTL2Q969R5 705 aa9.9□□□□□ -0.82
LSM5-210ENST00000480956 PLD4Q96BZ4 506 aa9.9□□□□□ -0.82
LSM5-210ENST00000480956 IP6K2Q9UHH9 426 aa9.9□□□□□ -0.82
LSM5-210ENST00000480956 CTDP1Q9Y5B0 961 aaPredicted RBP9.9□□□□□ -0.82
LSM5-210ENST00000480956 MORC2Q9Y6X9 1032 aaPredicted RBP9.9□□□□□ -0.82
LSM5-210ENST00000480956 PGRP06401 933 aa9.9□□□□□ -0.83
LSM5-210ENST00000480956 GGCXP38435 758 aa9.9□□□□□ -0.83
LSM5-210ENST00000480956 TLR1Q15399 786 aa9.9□□□□□ -0.83
LSM5-210ENST00000480956 CCDC96Q2M329 555 aa9.9□□□□□ -0.83
LSM5-210ENST00000480956 MINDY4Q4G0A6 757 aa9.9□□□□□ -0.83
LSM5-210ENST00000480956 SPATS2Q86XZ4 545 aaKnown RBP9.9□□□□□ -0.83
LSM5-210ENST00000480956 LRRC47Q8N1G4 583 aaKnown RBP9.9□□□□□ -0.83
LSM5-210ENST00000480956 RBBP8NLQ8NC74 664 aaPredicted RBP9.9□□□□□ -0.83
LSM5-210ENST00000480956 OXCT2Q9BYC2 517 aaPredicted RBP9.9□□□□□ -0.83
LSM5-210ENST00000480956 EHD4Q9H223 541 aa9.9□□□□□ -0.83
LSM5-210ENST00000480956 RAB6BQ9NRW1 208 aa9.9□□□□□ -0.83
LSM5-210ENST00000480956 GABRDO14764 452 aa9.89□□□□□ -0.83
LSM5-210ENST00000480956 ARAFP10398 606 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms