RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 ZKSCAN4Q969J2 545 aaPredicted RBP24.55■■□□□ 1.52
VPS36-204ENST00000480923 CYP7A1P22680 504 aa24.54■■□□□ 1.52
VPS36-204ENST00000480923 INHBEP58166 350 aa24.54■■□□□ 1.52
VPS36-204ENST00000480923 SH3RF3Q8TEJ3 882 aaPredicted RBP24.54■■□□□ 1.52
VPS36-204ENST00000480923 CNKSR2Q8WXI2 1034 aa24.54■■□□□ 1.52
VPS36-204ENST00000480923 DNAJC2Q99543 621 aaKnown RBP24.54■■□□□ 1.52
VPS36-204ENST00000480923 DCTPP1Q9H773 170 aa24.54■■□□□ 1.52
VPS36-204ENST00000480923 PCDHB15Q9Y5E8 787 aa24.54■■□□□ 1.52
VPS36-204ENST00000480923 SNCAIPQ9Y6H5 919 aa24.54■■□□□ 1.52
VPS36-204ENST00000480923 OTOFQ9HC10 1997 aa24.53■■□□□ 1.52
VPS36-204ENST00000480923 MAST2Q6P0Q8 1798 aa24.53■■□□□ 1.52
VPS36-204ENST00000480923 DDTLA6NHG4 134 aaPredicted RBP24.53■■□□□ 1.52
VPS36-204ENST00000480923 PLCG2P16885 1265 aa24.53■■□□□ 1.52
VPS36-204ENST00000480923 INPP5BP32019 993 aa24.53■■□□□ 1.52
VPS36-204ENST00000480923 MAP3K12Q12852 859 aa24.53■■□□□ 1.52
VPS36-204ENST00000480923 SH3BP5LQ7L8J4 393 aa24.53■■□□□ 1.52
VPS36-204ENST00000480923 ADGRA1Q86SQ6 560 aa24.53■■□□□ 1.52
VPS36-204ENST00000480923 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.53■■□□□ 1.52
VPS36-204ENST00000480923 OTUD5Q96G74 571 aa24.53■■□□□ 1.52
VPS36-204ENST00000480923 NPM3O75607 178 aaKnown RBP24.52■■□□□ 1.52
VPS36-204ENST00000480923 TTF1Q15361 905 aaPredicted RBP24.52■■□□□ 1.52
VPS36-204ENST00000480923 IFFO2Q5TF58 517 aa24.52■■□□□ 1.52
VPS36-204ENST00000480923 MAGEB6Q8N7X4 407 aa24.52■■□□□ 1.52
VPS36-204ENST00000480923 SPDYE5A6NIY4 337 aa24.51■■□□□ 1.51
VPS36-204ENST00000480923 TBC1D8O95759 1140 aa24.51■■□□□ 1.51
VPS36-204ENST00000480923 PPP4CP60510 307 aa24.51■■□□□ 1.51
VPS36-204ENST00000480923 ERO1BQ86YB8 467 aa24.51■■□□□ 1.51
VPS36-204ENST00000480923 IFNL1Q8IU54 200 aa24.51■■□□□ 1.51
VPS36-204ENST00000480923 ZNF112Q9UJU3 913 aa24.51■■□□□ 1.51
VPS36-204ENST00000480923 GOLIM4O00461 696 aa24.5■■□□□ 1.51
VPS36-204ENST00000480923 OSBPL5Q9H0X9 879 aaPredicted RBP24.5■■□□□ 1.51
VPS36-204ENST00000480923 ALDH1A1P00352 501 aa24.49■■□□□ 1.51
VPS36-204ENST00000480923 ATP5JP18859 108 aa24.49■■□□□ 1.51
VPS36-204ENST00000480923 BOLA2Q9H3K6 86 aa24.49■■□□□ 1.51
VPS36-204ENST00000480923 ATRNL1Q5VV63 1379 aa24.49■■□□□ 1.51
VPS36-204ENST00000480923 IGF2BP3O00425 579 aaKnown RBP eCLIP24.48■■□□□ 1.51
VPS36-204ENST00000480923 GTF2A2P52657 109 aa24.48■■□□□ 1.51
VPS36-204ENST00000480923 DYNLL1P63167 89 aaKnown RBP24.48■■□□□ 1.51
VPS36-204ENST00000480923 MIGA1Q8NAN2 632 aa24.48■■□□□ 1.51
VPS36-204ENST00000480923 TGFBRAP1Q8WUH2 860 aa24.48■■□□□ 1.51
VPS36-204ENST00000480923 CENPBP07199 599 aaPredicted RBP24.47■■□□□ 1.51
VPS36-204ENST00000480923 SLURP2P0DP57 97 aa24.47■■□□□ 1.51
VPS36-204ENST00000480923 OTUD7BQ6GQQ9 843 aa24.47■■□□□ 1.51
VPS36-204ENST00000480923 TMED8Q6PL24 325 aaPredicted RBP24.47■■□□□ 1.51
VPS36-204ENST00000480923 MAPKAPK5Q8IW41 473 aa24.47■■□□□ 1.51
VPS36-204ENST00000480923 EDC3Q96F86 508 aaKnown RBP24.47■■□□□ 1.51
VPS36-204ENST00000480923 MS4A4AQ96JQ5 239 aa24.47■■□□□ 1.51
VPS36-204ENST00000480923 AK9Q5TCS8 1911 aa24.47■■□□□ 1.51
VPS36-204ENST00000480923 CCL15-CCL14A0A0B4J2E2 113 aa24.46■■□□□ 1.51
VPS36-204ENST00000480923 PHF20L1A8MW92 1017 aa24.46■■□□□ 1.51
VPS36-204ENST00000480923 PPIL2Q13356 520 aa24.46■■□□□ 1.51
VPS36-204ENST00000480923 CCL15Q16663 113 aa24.46■■□□□ 1.51
VPS36-204ENST00000480923 NOL9Q5SY16 702 aaKnown RBP24.46■■□□□ 1.51
VPS36-204ENST00000480923 PAG1Q9NWQ8 432 aa24.46■■□□□ 1.51
VPS36-204ENST00000480923 COL2A1P02458 1487 aaPredicted RBP24.45■■□□□ 1.51
VPS36-204ENST00000480923 TESPA1A2RU30 521 aaPredicted RBP24.45■■□□□ 1.5
VPS36-204ENST00000480923 IRF6O14896 467 aa24.45■■□□□ 1.5
VPS36-204ENST00000480923 MAP3K10Q02779 954 aa24.45■■□□□ 1.5
VPS36-204ENST00000480923 PPATQ06203 517 aa24.45■■□□□ 1.5
VPS36-204ENST00000480923 SLC9C2Q5TAH2 1124 aa24.45■■□□□ 1.5
VPS36-204ENST00000480923 CERS3Q8IU89 383 aa24.45■■□□□ 1.5
VPS36-204ENST00000480923 BRI3BPQ8WY22 251 aa24.45■■□□□ 1.5
VPS36-204ENST00000480923 HAUS7Q99871 368 aa24.45■■□□□ 1.5
VPS36-204ENST00000480923 PTPN18Q99952 460 aa24.45■■□□□ 1.5
VPS36-204ENST00000480923 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.45■■□□□ 1.5
VPS36-204ENST00000480923 DOCK2Q92608 1830 aa24.45■■□□□ 1.5
VPS36-204ENST00000480923 FLT1P17948 1338 aa24.44■■□□□ 1.5
VPS36-204ENST00000480923 PDE6AP16499 860 aa24.44■■□□□ 1.5
VPS36-204ENST00000480923 SNAPC2Q13487 334 aa24.44■■□□□ 1.5
VPS36-204ENST00000480923 SCYL3Q8IZE3 742 aa24.44■■□□□ 1.5
VPS36-204ENST00000480923 GPATCH3Q96I76 525 aa24.44■■□□□ 1.5
VPS36-204ENST00000480923 DHX36Q9H2U1 1008 aaKnown RBP24.44■■□□□ 1.5
VPS36-204ENST00000480923 PICK1Q9NRD5 415 aa24.44■■□□□ 1.5
VPS36-204ENST00000480923 ECHDC1Q9NTX5 307 aa24.44■■□□□ 1.5
VPS36-204ENST00000480923 MYO5AQ9Y4I1 1855 aaKnown RBP24.43■■□□□ 1.5
VPS36-204ENST00000480923 FAM196BA6NMK8 535 aa24.43■■□□□ 1.5
VPS36-204ENST00000480923 GPR25O00155 361 aa24.43■■□□□ 1.5
VPS36-204ENST00000480923 TBC1D12O60347 775 aa24.43■■□□□ 1.5
VPS36-204ENST00000480923 CETPP11597 493 aa24.43■■□□□ 1.5
VPS36-204ENST00000480923 CFHR5Q9BXR6 569 aa24.43■■□□□ 1.5
VPS36-204ENST00000480923 R3HDMLQ9H3Y0 253 aa24.43■■□□□ 1.5
VPS36-204ENST00000480923 ZNF532Q9HCE3 1301 aa24.42■■□□□ 1.5
VPS36-204ENST00000480923 CAPN15O75808 1086 aa24.42■■□□□ 1.5
VPS36-204ENST00000480923 USP5P45974 858 aa24.42■■□□□ 1.5
VPS36-204ENST00000480923 DGKZQ13574 1117 aa24.42■■□□□ 1.5
VPS36-204ENST00000480923 ZNF296Q8WUU4 475 aaPredicted RBP24.42■■□□□ 1.5
VPS36-204ENST00000480923 SAP30BPQ9UHR5 308 aaKnown RBP24.42■■□□□ 1.5
VPS36-204ENST00000480923 MAGEB6P1A0A0J9YX57 407 aa24.41■■□□□ 1.5
VPS36-204ENST00000480923 CTNND1O60716 968 aaKnown RBP24.41■■□□□ 1.5
VPS36-204ENST00000480923 PI4KBQ9UBF8 816 aa24.41■■□□□ 1.5
VPS36-204ENST00000480923 CASP8AP2Q9UKL3 1982 aa24.4■■□□□ 1.5
VPS36-204ENST00000480923 AAMPQ13685 434 aa24.4■■□□□ 1.5
VPS36-204ENST00000480923 TRIM34Q9BYJ4 488 aa24.4■■□□□ 1.5
VPS36-204ENST00000480923 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.4■■□□□ 1.54e-6■■□□□ 13.6
VPS36-204ENST00000480923 ZBTB47Q9UFB7 747 aaPredicted RBP24.4■■□□□ 1.5
VPS36-204ENST00000480923 HERC5Q9UII4 1024 aaKnown RBP24.4■■□□□ 1.5
VPS36-204ENST00000480923 PALD1Q9ULE6 856 aa24.4■■□□□ 1.5
VPS36-204ENST00000480923 SUPT16HQ9Y5B9 1047 aaKnown RBP24.4■■□□□ 1.5
VPS36-204ENST00000480923 HLA-DOAP06340 250 aa24.39■■□□□ 1.49
VPS36-204ENST00000480923 PTPRAP18433 802 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms