RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 RANBP2P49792 3224 aaKnown RBP11.08□□□□□ -0.64
VCP-206ENST00000480327 RPAP1Q9BWH6 1393 aaPredicted RBP11.08□□□□□ -0.64
VCP-206ENST00000480327 BTBD19C9JJ37 291 aa11.08□□□□□ -0.64
VCP-206ENST00000480327 IRF6O14896 467 aa11.08□□□□□ -0.64
VCP-206ENST00000480327 IFIT2P09913 472 aaKnown RBP11.08□□□□□ -0.64
VCP-206ENST00000480327 GTF2A2P52657 109 aa11.08□□□□□ -0.64
VCP-206ENST00000480327 HABP4Q5JVS0 413 aaKnown RBP11.08□□□□□ -0.64
VCP-206ENST00000480327 TTC39AQ5SRH9 613 aa11.08□□□□□ -0.64
VCP-206ENST00000480327 TEKT1Q969V4 418 aa11.08□□□□□ -0.64
VCP-206ENST00000480327 GCC1Q96CN9 775 aa11.08□□□□□ -0.64
VCP-206ENST00000480327 MRIQ9BWK5 157 aa11.08□□□□□ -0.64
VCP-206ENST00000480327 GNL3LQ9NVN8 582 aaKnown RBP11.08□□□□□ -0.64
VCP-206ENST00000480327 ZBTB47Q9UFB7 747 aaPredicted RBP11.08□□□□□ -0.64
VCP-206ENST00000480327 DBNLQ9UJU6 430 aaKnown RBP11.08□□□□□ -0.64
VCP-206ENST00000480327 DOCK3Q8IZD9 2030 aa11.08□□□□□ -0.64
VCP-206ENST00000480327 DOCK1Q14185 1865 aa11.07□□□□□ -0.64
VCP-206ENST00000480327 TNNI2P48788 182 aa11.07□□□□□ -0.64
VCP-206ENST00000480327 MOGSQ13724 837 aa11.07□□□□□ -0.64
VCP-206ENST00000480327 CCDC158Q5M9N0 1113 aa11.07□□□□□ -0.64
VCP-206ENST00000480327 FKBP1CQ5VVH2 108 aa11.07□□□□□ -0.64
VCP-206ENST00000480327 FAM83AQ86UY5 434 aa11.07□□□□□ -0.64
VCP-206ENST00000480327 TBC1D22AQ8WUA7 517 aa11.07□□□□□ -0.64
VCP-206ENST00000480327 WRNIP1Q96S55 665 aa11.07□□□□□ -0.64
VCP-206ENST00000480327 ZFYVE28Q9HCC9 887 aa11.07□□□□□ -0.64
VCP-206ENST00000480327 CSADQ9Y600 493 aa11.07□□□□□ -0.64
VCP-206ENST00000480327 ATAD5Q96QE3 1844 aa11.07□□□□□ -0.64
VCP-206ENST00000480327 ADGRA2Q96PE1 1338 aa11.07□□□□□ -0.64
VCP-206ENST00000480327 TLR2O60603 784 aa11.06□□□□□ -0.64
VCP-206ENST00000480327 INPP5BP32019 993 aa11.06□□□□□ -0.64
VCP-206ENST00000480327 LACTBP83111 547 aaPredicted RBP11.06□□□□□ -0.64
VCP-206ENST00000480327 NFIAQ12857 509 aa11.06□□□□□ -0.64
VCP-206ENST00000480327 PPIL2Q13356 520 aa11.06□□□□□ -0.64
VCP-206ENST00000480327 RASGRF1Q13972 1273 aa11.06□□□□□ -0.64
VCP-206ENST00000480327 HHIPL2Q6UWX4 724 aa11.06□□□□□ -0.64
VCP-206ENST00000480327 PI16Q6UXB8 463 aa11.06□□□□□ -0.64
VCP-206ENST00000480327 ERO1BQ86YB8 467 aa11.06□□□□□ -0.64
VCP-206ENST00000480327 SMC5Q8IY18 1101 aa11.06□□□□□ -0.64
VCP-206ENST00000480327 OTUD7AQ8TE49 926 aaPredicted RBP11.06□□□□□ -0.64
VCP-206ENST00000480327 SNRKQ9NRH2 765 aa11.06□□□□□ -0.64
VCP-206ENST00000480327 ALPK3Q96L96 1907 aa11.05□□□□□ -0.64
VCP-206ENST00000480327 ATRNL1Q5VV63 1379 aa11.05□□□□□ -0.64
VCP-206ENST00000480327 CETPP11597 493 aa11.05□□□□□ -0.64
VCP-206ENST00000480327 DIXDC1Q155Q3 683 aa11.05□□□□□ -0.64
VCP-206ENST00000480327 TSHZ3Q63HK5 1081 aa11.05□□□□□ -0.64
VCP-206ENST00000480327 C17orf99Q6UX52 265 aa11.05□□□□□ -0.64
VCP-206ENST00000480327 MIGA2Q7L4E1 593 aa11.05□□□□□ -0.64
VCP-206ENST00000480327 ZFPM1Q8IX07 1006 aa11.05□□□□□ -0.64
VCP-206ENST00000480327 SH3TC2Q8TF17 1288 aa11.05□□□□□ -0.64
VCP-206ENST00000480327 CCDC136Q96JN2 1154 aa11.05□□□□□ -0.64
VCP-206ENST00000480327 CDK5RAP2Q96SN8 1893 aa11.05□□□□□ -0.64
VCP-206ENST00000480327 LNPKQ9C0E8 428 aa11.05□□□□□ -0.64
VCP-206ENST00000480327 FAM198AQ9UFP1 575 aa11.05□□□□□ -0.64
VCP-206ENST00000480327 ZNF112Q9UJU3 913 aa11.05□□□□□ -0.64
VCP-206ENST00000480327 DAGLAQ9Y4D2 1042 aa11.05□□□□□ -0.64
VCP-206ENST00000480327 NDUFB9Q9Y6M9 179 aa11.05□□□□□ -0.64
VCP-206ENST00000480327 TRIOBPQ9H2D6 2365 aa11.05□□□□□ -0.64
VCP-206ENST00000480327 MYO5AQ9Y4I1 1855 aaKnown RBP11.04□□□□□ -0.64
VCP-206ENST00000480327 MYCP01106 439 aaPredicted RBP11.04□□□□□ -0.64
VCP-206ENST00000480327 UQCRFS1P1P0C7P4 283 aa11.04□□□□□ -0.64
VCP-206ENST00000480327 ARID4AP29374 1257 aaPredicted RBP11.04□□□□□ -0.64
VCP-206ENST00000480327 PRDX5P30044 214 aa11.04□□□□□ -0.64
VCP-206ENST00000480327 MCAMP43121 646 aa11.04□□□□□ -0.64
VCP-206ENST00000480327 SLC9C1Q4G0N8 1177 aa11.04□□□□□ -0.64
VCP-206ENST00000480327 CDC42EP5Q6NZY7 148 aa11.04□□□□□ -0.64
VCP-206ENST00000480327 SPATA5Q8NB90 893 aa11.04□□□□□ -0.64
VCP-206ENST00000480327 FAM151AQ8WW52 585 aa11.04□□□□□ -0.64
VCP-206ENST00000480327 SHISA4Q96DD7 197 aa11.04□□□□□ -0.64
VCP-206ENST00000480327 ZCCHC17Q9NP64 241 aaKnown RBP11.04□□□□□ -0.64
VCP-206ENST00000480327 HMG20BQ9P0W2 317 aa11.04□□□□□ -0.64
VCP-206ENST00000480327 DENND2AQ9ULE3 1009 aa11.04□□□□□ -0.64
VCP-206ENST00000480327 SUGT1Q9Y2Z0 365 aa11.04□□□□□ -0.64
VCP-206ENST00000480327 RFX7Q2KHR2 1363 aa11.03□□□□□ -0.64
VCP-206ENST00000480327 SIPA1L1O43166 1804 aa11.03□□□□□ -0.64
VCP-206ENST00000480327 SEMA3EO15041 775 aa11.03□□□□□ -0.64
VCP-206ENST00000480327 ECM2O94769 699 aaPredicted RBP11.03□□□□□ -0.64
VCP-206ENST00000480327 SLURP2P0DP57 97 aa11.03□□□□□ -0.64
VCP-206ENST00000480327 ZAP70P43403 619 aa11.03□□□□□ -0.64
VCP-206ENST00000480327 FXR1P51114 621 aaKnown RBP eCLIP11.03□□□□□ -0.649e-6■■■□□ 16.8
VCP-206ENST00000480327 NUCB1Q02818 461 aa11.03□□□□□ -0.64
VCP-206ENST00000480327 PPATQ06203 517 aa11.03□□□□□ -0.64
VCP-206ENST00000480327 SNAPC2Q13487 334 aa11.03□□□□□ -0.64
VCP-206ENST00000480327 TBC1D9Q6ZT07 1266 aa11.03□□□□□ -0.64
VCP-206ENST00000480327 CHD1LQ86WJ1 897 aa11.03□□□□□ -0.64
VCP-206ENST00000480327 TRIM47Q96LD4 638 aa11.03□□□□□ -0.64
VCP-206ENST00000480327 ZNF341Q9BYN7 854 aa11.03□□□□□ -0.64
VCP-206ENST00000480327 BOLA2Q9H3K6 86 aa11.03□□□□□ -0.64
VCP-206ENST00000480327 ABCF2Q9UG63 623 aa11.03□□□□□ -0.64
VCP-206ENST00000480327 CPA4Q9UI42 421 aa11.03□□□□□ -0.64
VCP-206ENST00000480327 KCNH4Q9UQ05 1017 aa11.03□□□□□ -0.64
VCP-206ENST00000480327 MAST3O60307 1309 aa11.03□□□□□ -0.64
VCP-206ENST00000480327 TCP10Q12799 353 aa11.02□□□□□ -0.65
VCP-206ENST00000480327 MTFR1Q15390 333 aa11.02□□□□□ -0.65
VCP-206ENST00000480327 GPAT2Q6NUI2 795 aa11.02□□□□□ -0.65
VCP-206ENST00000480327 SH3BP5LQ7L8J4 393 aa11.02□□□□□ -0.65
VCP-206ENST00000480327 ANKRD23Q86SG2 305 aa11.02□□□□□ -0.65
VCP-206ENST00000480327 WDR66Q8TBY9 1149 aa11.02□□□□□ -0.65
VCP-206ENST00000480327 DNAJC2Q99543 621 aaKnown RBP11.02□□□□□ -0.65
VCP-206ENST00000480327 TMEM106CQ9BVX2 250 aa11.02□□□□□ -0.65
VCP-206ENST00000480327 ECHDC1Q9NTX5 307 aa11.02□□□□□ -0.65
VCP-206ENST00000480327 PPP4R2Q9NY27 417 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms