RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 FAM83AQ86UY5 434 aa13.4□□□□□ -0.26
CLDN11-205ENST00000480067 ZSCAN29Q8IWY8 852 aaPredicted RBP13.4□□□□□ -0.26
CLDN11-205ENST00000480067 DDX4Q9NQI0 724 aaKnown RBP13.4□□□□□ -0.26
CLDN11-205ENST00000480067 FAM198AQ9UFP1 575 aa13.4□□□□□ -0.26
CLDN11-205ENST00000480067 FLT1P17948 1338 aa13.39□□□□□ -0.27
CLDN11-205ENST00000480067 GSG1L2A8MUP6 293 aa13.39□□□□□ -0.27
CLDN11-205ENST00000480067 KIF3CO14782 793 aa13.39□□□□□ -0.27
CLDN11-205ENST00000480067 HSPD1P10809 573 aaKnown RBP13.39□□□□□ -0.27
CLDN11-205ENST00000480067 VPS53Q5VIR6 699 aa13.39□□□□□ -0.27
CLDN11-205ENST00000480067 MAP1SQ66K74 1059 aaPredicted RBP13.39□□□□□ -0.27
CLDN11-205ENST00000480067 USP48Q86UV5 1035 aa13.39□□□□□ -0.27
CLDN11-205ENST00000480067 FAM151AQ8WW52 585 aa13.39□□□□□ -0.27
CLDN11-205ENST00000480067 IL25Q9H293 177 aa13.39□□□□□ -0.27
CLDN11-205ENST00000480067 DCP1AQ9NPI6 582 aaPredicted RBP13.39□□□□□ -0.27
CLDN11-205ENST00000480067 RPAP1Q9BWH6 1393 aaPredicted RBP13.38□□□□□ -0.27
CLDN11-205ENST00000480067 TDO2P48775 406 aa13.38□□□□□ -0.27
CLDN11-205ENST00000480067 CHADLQ6NUI6 762 aa13.38□□□□□ -0.27
CLDN11-205ENST00000480067 GIMAP6Q6P9H5 292 aa13.38□□□□□ -0.27
CLDN11-205ENST00000480067 ZFPM1Q8IX07 1006 aa13.38□□□□□ -0.27
CLDN11-205ENST00000480067 AMOTL1Q8IY63 956 aa13.38□□□□□ -0.27
CLDN11-205ENST00000480067 TMEM39BQ9GZU3 492 aa13.38□□□□□ -0.27
CLDN11-205ENST00000480067 OSBPL5Q9H0X9 879 aaPredicted RBP13.38□□□□□ -0.27
CLDN11-205ENST00000480067 MCM9Q9NXL9 1143 aa13.38□□□□□ -0.27
CLDN11-205ENST00000480067 SAP30BPQ9UHR5 308 aaKnown RBP13.38□□□□□ -0.27
CLDN11-205ENST00000480067 PPP2R3BQ9Y5P8 575 aa13.38□□□□□ -0.27
CLDN11-205ENST00000480067 ADAMTSL1Q8N6G6 1762 aa13.37□□□□□ -0.27
CLDN11-205ENST00000480067 EIF5BO60841 1220 aaKnown RBP13.37□□□□□ -0.27
CLDN11-205ENST00000480067 POLR3DP05423 398 aaPredicted RBP13.37□□□□□ -0.27
CLDN11-205ENST00000480067 IFNL3Q8IZI9 196 aa13.37□□□□□ -0.27
CLDN11-205ENST00000480067 GLIS2Q9BZE0 524 aaPredicted RBP13.37□□□□□ -0.27
CLDN11-205ENST00000480067 NAPBQ9H115 298 aa13.37□□□□□ -0.27
CLDN11-205ENST00000480067 DHX36Q9H2U1 1008 aaKnown RBP13.37□□□□□ -0.27
CLDN11-205ENST00000480067 ANO2Q9NQ90 1003 aa13.37□□□□□ -0.27
CLDN11-205ENST00000480067 MKRN1Q9UHC7 482 aaKnown RBP13.37□□□□□ -0.27
CLDN11-205ENST00000480067 PALD1Q9ULE6 856 aa13.37□□□□□ -0.27
CLDN11-205ENST00000480067 MYH7P12883 1935 aa13.37□□□□□ -0.27
CLDN11-205ENST00000480067 AK9Q5TCS8 1911 aa13.37□□□□□ -0.27
CLDN11-205ENST00000480067 CNTNAP1P78357 1384 aa13.37□□□□□ -0.27
CLDN11-205ENST00000480067 USP17L12C9JPN9 530 aa13.37□□□□□ -0.27
CLDN11-205ENST00000480067 ADM5C9JUS6 153 aa13.37□□□□□ -0.27
CLDN11-205ENST00000480067 USP17L21D6R901 530 aa13.37□□□□□ -0.27
CLDN11-205ENST00000480067 TOMM70O94826 608 aa13.37□□□□□ -0.27
CLDN11-205ENST00000480067 REC8O95072 547 aa13.37□□□□□ -0.27
CLDN11-205ENST00000480067 SUPT20HL1Q3ZLR7 823 aa13.37□□□□□ -0.27
CLDN11-205ENST00000480067 DSCC1Q9BVC3 393 aa13.37□□□□□ -0.27
CLDN11-205ENST00000480067 FGAP02671 866 aa13.36□□□□□ -0.27
CLDN11-205ENST00000480067 HLA-DOAP06340 250 aa13.36□□□□□ -0.27
CLDN11-205ENST00000480067 ALX1Q15699 326 aa13.36□□□□□ -0.27
CLDN11-205ENST00000480067 SLC4A8Q2Y0W8 1093 aa13.36□□□□□ -0.27
CLDN11-205ENST00000480067 PRAMEF18Q5VWM3 479 aa13.36□□□□□ -0.27
CLDN11-205ENST00000480067 TTC6Q86TZ1 520 aa13.36□□□□□ -0.27
CLDN11-205ENST00000480067 SMC1BQ8NDV3 1235 aa13.36□□□□□ -0.27
CLDN11-205ENST00000480067 CSRNP1Q96S65 589 aa13.36□□□□□ -0.27
CLDN11-205ENST00000480067 PI4KBQ9UBF8 816 aa13.36□□□□□ -0.27
CLDN11-205ENST00000480067 CTNNA3Q9UI47 895 aa13.36□□□□□ -0.27
CLDN11-205ENST00000480067 DDTLA6NHG4 134 aaPredicted RBP13.35□□□□□ -0.27
CLDN11-205ENST00000480067 MINDY4BA8MYZ0 360 aa13.35□□□□□ -0.27
CLDN11-205ENST00000480067 FOXP2O15409 715 aa13.35□□□□□ -0.27
CLDN11-205ENST00000480067 PTH1RQ03431 593 aa13.35□□□□□ -0.27
CLDN11-205ENST00000480067 CTR9Q6PD62 1173 aa13.35□□□□□ -0.27
CLDN11-205ENST00000480067 SH3BP5LQ7L8J4 393 aa13.35□□□□□ -0.27
CLDN11-205ENST00000480067 HOOK2Q96ED9 719 aa13.35□□□□□ -0.27
CLDN11-205ENST00000480067 EPB41L4AQ9HCS5 686 aaPredicted RBP13.35□□□□□ -0.27
CLDN11-205ENST00000480067 ARPP21Q9UBL0 812 aaPredicted RBP13.35□□□□□ -0.27
CLDN11-205ENST00000480067 NF2P35240 595 aa13.34□□□□□ -0.27
CLDN11-205ENST00000480067 C8orf34Q49A92 452 aa13.34□□□□□ -0.27
CLDN11-205ENST00000480067 SBK1Q52WX2 424 aa13.34□□□□□ -0.27
CLDN11-205ENST00000480067 NBPF12Q5TAG4 269 aaPredicted RBP13.34□□□□□ -0.27
CLDN11-205ENST00000480067 DLK2Q6UY11 383 aa13.34□□□□□ -0.27
CLDN11-205ENST00000480067 RBM46Q8TBY0 533 aaKnown RBP13.34□□□□□ -0.27
CLDN11-205ENST00000480067 MAP4K1Q92918 833 aa13.34□□□□□ -0.27
CLDN11-205ENST00000480067 TEPSINQ96N21 525 aa13.34□□□□□ -0.27
CLDN11-205ENST00000480067 TRIM34Q9BYJ4 488 aa13.34□□□□□ -0.27
CLDN11-205ENST00000480067 LSG1Q9H089 658 aaKnown RBP13.34□□□□□ -0.27
CLDN11-205ENST00000480067 U3KPZ7 1027 aaPredicted RBP13.34□□□□□ -0.27
CLDN11-205ENST00000480067 TRAF5O00463 557 aa13.33□□□□□ -0.28
CLDN11-205ENST00000480067 PLCD1P51178 756 aa13.33□□□□□ -0.28
CLDN11-205ENST00000480067 C12orf60Q5U649 245 aa13.33□□□□□ -0.28
CLDN11-205ENST00000480067 FOXP4Q8IVH2 680 aaPredicted RBP13.33□□□□□ -0.28
CLDN11-205ENST00000480067 CDAN1Q8IWY9 1227 aa13.33□□□□□ -0.28
CLDN11-205ENST00000480067 CRACR2BQ8N4Y2 399 aaPredicted RBP13.33□□□□□ -0.28
CLDN11-205ENST00000480067 CDCA5Q96FF9 252 aa13.33□□□□□ -0.28
CLDN11-205ENST00000480067 SERPINB13Q9UIV8 391 aa13.33□□□□□ -0.28
CLDN11-205ENST00000480067 ATRNL1Q5VV63 1379 aa13.33□□□□□ -0.28
CLDN11-205ENST00000480067 CYP2D7A0A087X1C5 515 aa13.32□□□□□ -0.28
CLDN11-205ENST00000480067 ZNF213O14771 459 aa13.32□□□□□ -0.28
CLDN11-205ENST00000480067 ITGBL1O95965 494 aaPredicted RBP13.32□□□□□ -0.28
CLDN11-205ENST00000480067 SLC3A2P08195 630 aaKnown RBP13.32□□□□□ -0.28
CLDN11-205ENST00000480067 CYP2D6P10635 497 aa13.32□□□□□ -0.28
CLDN11-205ENST00000480067 IMMTQ16891 758 aaKnown RBP13.32□□□□□ -0.28
CLDN11-205ENST00000480067 MIGA2Q7L4E1 593 aa13.32□□□□□ -0.28
CLDN11-205ENST00000480067 ZMYM6O95789 1325 aa13.32□□□□□ -0.28
CLDN11-205ENST00000480067 PPP1R12BO60237 982 aaPredicted RBP13.32□□□□□ -0.28
CLDN11-205ENST00000480067 PPARAQ07869 468 aa13.32□□□□□ -0.28
CLDN11-205ENST00000480067 FSTL1Q12841 308 aa13.32□□□□□ -0.28
CLDN11-205ENST00000480067 DCAF15Q66K64 600 aa13.32□□□□□ -0.28
CLDN11-205ENST00000480067 ZNF408Q9H9D4 720 aa13.32□□□□□ -0.28
CLDN11-205ENST00000480067 HERC5Q9UII4 1024 aaKnown RBP13.32□□□□□ -0.28
CLDN11-205ENST00000480067 RBM8AQ9Y5S9 174 aaKnown RBP13.32□□□□□ -0.28
CLDN11-205ENST00000480067 COL2A1P02458 1487 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms