RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 MKRN1Q9UHC7 482 aaKnown RBP12.94□□□□□ -0.34
VTI1A-204ENST00000480057 MTMR6Q9Y217 621 aa12.94□□□□□ -0.34
VTI1A-204ENST00000480057 ROBO3Q96MS0 1386 aa12.94□□□□□ -0.34
VTI1A-204ENST00000480057 KLF18A0A0U1RQI7 1052 aa12.93□□□□□ -0.34
VTI1A-204ENST00000480057 ERICH2A1L162 156 aa12.93□□□□□ -0.34
VTI1A-204ENST00000480057 TRAK2O60296 914 aa12.93□□□□□ -0.34
VTI1A-204ENST00000480057 KDM4AO75164 1064 aa12.93□□□□□ -0.34
VTI1A-204ENST00000480057 CHST3Q7LGC8 479 aa12.93□□□□□ -0.34
VTI1A-204ENST00000480057 AMOTL1Q8IY63 956 aa12.93□□□□□ -0.34
VTI1A-204ENST00000480057 NSUN7Q8NE18 718 aaKnown RBP12.93□□□□□ -0.34
VTI1A-204ENST00000480057 MRIQ9BWK5 157 aa12.93□□□□□ -0.34
VTI1A-204ENST00000480057 VPS33BQ9H267 617 aa12.93□□□□□ -0.34
VTI1A-204ENST00000480057 LY9Q9HBG7 655 aa12.93□□□□□ -0.34
VTI1A-204ENST00000480057 ZSWIM5Q9P217 1185 aa12.93□□□□□ -0.34
VTI1A-204ENST00000480057 BRPF3Q9ULD4 1205 aa12.93□□□□□ -0.34
VTI1A-204ENST00000480057 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.93□□□□□ -0.34
VTI1A-204ENST00000480057 NAV1Q8NEY1 1877 aa12.93□□□□□ -0.34
VTI1A-204ENST00000480057 BAZ2AQ9UIF9 1905 aaKnown RBP12.92□□□□□ -0.34
VTI1A-204ENST00000480057 PTPDC1A2A3K4 754 aa12.92□□□□□ -0.34
VTI1A-204ENST00000480057 GOLGA8BA8MQT2 603 aa12.92□□□□□ -0.34
VTI1A-204ENST00000480057 MINDY4BA8MYZ0 360 aa12.92□□□□□ -0.34
VTI1A-204ENST00000480057 USP17L12C9JPN9 530 aa12.92□□□□□ -0.34
VTI1A-204ENST00000480057 USP17L21D6R901 530 aa12.92□□□□□ -0.34
VTI1A-204ENST00000480057 G3V3G9 751 aa12.92□□□□□ -0.34
VTI1A-204ENST00000480057 IFIT3O14879 490 aaKnown RBP12.92□□□□□ -0.34
VTI1A-204ENST00000480057 RIMBP2O15034 1052 aa12.92□□□□□ -0.34
VTI1A-204ENST00000480057 CDKL5O76039 1030 aa12.92□□□□□ -0.34
VTI1A-204ENST00000480057 CHRNA5P30532 468 aa12.92□□□□□ -0.34
VTI1A-204ENST00000480057 GTF2IP78347 998 aa12.92□□□□□ -0.34
VTI1A-204ENST00000480057 PPP2R5BQ15173 497 aa12.92□□□□□ -0.34
VTI1A-204ENST00000480057 TMEM67Q5HYA8 995 aa12.92□□□□□ -0.34
VTI1A-204ENST00000480057 DCAF8Q5TAQ9 597 aa12.92□□□□□ -0.34
VTI1A-204ENST00000480057 MCTP1Q6DN14 999 aa12.92□□□□□ -0.34
VTI1A-204ENST00000480057 CPLX2Q6PUV4 134 aaKnown RBP12.92□□□□□ -0.34
VTI1A-204ENST00000480057 FAM184AQ8NB25 1140 aa12.92□□□□□ -0.34
VTI1A-204ENST00000480057 TMEM87AQ8NBN3 555 aa12.92□□□□□ -0.34
VTI1A-204ENST00000480057 HPS5Q9UPZ3 1129 aa12.92□□□□□ -0.34
VTI1A-204ENST00000480057 JAG2Q9Y219 1238 aa12.92□□□□□ -0.34
VTI1A-204ENST00000480057 TACC3Q9Y6A5 838 aa12.92□□□□□ -0.34
VTI1A-204ENST00000480057 DDX60LQ5H9U9 1706 aaKnown RBP12.91□□□□□ -0.34
VTI1A-204ENST00000480057 CTDNEP1O95476 244 aa12.91□□□□□ -0.34
VTI1A-204ENST00000480057 BTDP43251 543 aa12.91□□□□□ -0.34
VTI1A-204ENST00000480057 USP5P45974 858 aa12.91□□□□□ -0.34
VTI1A-204ENST00000480057 HDLBPQ00341 1268 aaKnown RBP12.91□□□□□ -0.34
VTI1A-204ENST00000480057 PDE4BQ07343 736 aa12.91□□□□□ -0.34
VTI1A-204ENST00000480057 GRIK5Q16478 980 aa12.91□□□□□ -0.34
VTI1A-204ENST00000480057 CSPP1Q1MSJ5 1256 aa12.91□□□□□ -0.34
VTI1A-204ENST00000480057 CCDC178Q5BJE1 867 aa12.91□□□□□ -0.34
VTI1A-204ENST00000480057 SOGA3Q5TF21 947 aa12.91□□□□□ -0.34
VTI1A-204ENST00000480057 STRIP1Q5VSL9 837 aa12.91□□□□□ -0.34
VTI1A-204ENST00000480057 APOA5Q6Q788 366 aa12.91□□□□□ -0.34
VTI1A-204ENST00000480057 SYNE3Q6ZMZ3 975 aa12.91□□□□□ -0.34
VTI1A-204ENST00000480057 RTKN2Q8IZC4 609 aa12.91□□□□□ -0.34
VTI1A-204ENST00000480057 TTLL6Q8N841 843 aa12.91□□□□□ -0.34
VTI1A-204ENST00000480057 FOCADQ5VW36 1801 aa12.9□□□□□ -0.34
VTI1A-204ENST00000480057 CCDC69A6NI79 296 aa12.9□□□□□ -0.34
VTI1A-204ENST00000480057 ZBTB43O43298 467 aa12.9□□□□□ -0.34
VTI1A-204ENST00000480057 JAK2O60674 1132 aa12.9□□□□□ -0.34
VTI1A-204ENST00000480057 TGFB2P61812 414 aa12.9□□□□□ -0.34
VTI1A-204ENST00000480057 KIAA2012Q0VF49 1180 aa12.9□□□□□ -0.34
VTI1A-204ENST00000480057 WTAPQ15007 396 aa12.9□□□□□ -0.34
VTI1A-204ENST00000480057 DIXDC1Q155Q3 683 aa12.9□□□□□ -0.34
VTI1A-204ENST00000480057 KLHL40Q2TBA0 621 aa12.9□□□□□ -0.34
VTI1A-204ENST00000480057 CCDC93Q567U6 631 aa12.9□□□□□ -0.34
VTI1A-204ENST00000480057 C12orf60Q5U649 245 aa12.9□□□□□ -0.34
VTI1A-204ENST00000480057 HHIPL2Q6UWX4 724 aa12.9□□□□□ -0.34
VTI1A-204ENST00000480057 SH3RF3Q8TEJ3 882 aaPredicted RBP12.9□□□□□ -0.34
VTI1A-204ENST00000480057 PSMD1Q99460 953 aa12.9□□□□□ -0.34
VTI1A-204ENST00000480057 UBAC1Q9BSL1 405 aa12.9□□□□□ -0.34
VTI1A-204ENST00000480057 MTFR1LQ9H019 292 aa12.9□□□□□ -0.34
VTI1A-204ENST00000480057 ZSCAN16Q9H4T2 348 aaPredicted RBP12.9□□□□□ -0.34
VTI1A-204ENST00000480057 ZNF287Q9HBT7 754 aa12.9□□□□□ -0.34
VTI1A-204ENST00000480057 GPHNQ9NQX3 736 aaPredicted RBP12.9□□□□□ -0.34
VTI1A-204ENST00000480057 LMBRD1Q9NUN5 540 aa12.9□□□□□ -0.34
VTI1A-204ENST00000480057 MCM9Q9NXL9 1143 aa12.9□□□□□ -0.34
VTI1A-204ENST00000480057 TAOK2Q9UL54 1235 aa12.9□□□□□ -0.34
VTI1A-204ENST00000480057 SLC12A7Q9Y666 1083 aa12.9□□□□□ -0.34
VTI1A-204ENST00000480057 CDK5RAP2Q96SN8 1893 aa12.9□□□□□ -0.34
VTI1A-204ENST00000480057 ZNF646O15015 1829 aaPredicted RBP12.9□□□□□ -0.34
VTI1A-204ENST00000480057 CCDC196A0A1B0GTZ2 297 aa12.89□□□□□ -0.35
VTI1A-204ENST00000480057 VPS37CA5D8V6 355 aaPredicted RBP12.89□□□□□ -0.35
VTI1A-204ENST00000480057 CPLX1O14810 134 aa12.89□□□□□ -0.35
VTI1A-204ENST00000480057 MBD3O95983 291 aa12.89□□□□□ -0.35
VTI1A-204ENST00000480057 METAP2P50579 478 aaKnown RBP eCLIP12.89□□□□□ -0.35
VTI1A-204ENST00000480057 RHBDL3P58872 404 aa12.89□□□□□ -0.35
VTI1A-204ENST00000480057 CCT2P78371 535 aaKnown RBP12.89□□□□□ -0.35
VTI1A-204ENST00000480057 GSE1Q14687 1217 aa12.89□□□□□ -0.35
VTI1A-204ENST00000480057 SEC23AQ15436 765 aa12.89□□□□□ -0.35
VTI1A-204ENST00000480057 OLFM4Q6UX06 510 aa12.89□□□□□ -0.35
VTI1A-204ENST00000480057 NFXL1Q6ZNB6 911 aa12.89□□□□□ -0.35
VTI1A-204ENST00000480057 IQCA1Q86XH1 822 aa12.89□□□□□ -0.35
VTI1A-204ENST00000480057 TOMM22Q9NS69 142 aa12.89□□□□□ -0.35
VTI1A-204ENST00000480057 NAP1L2Q9ULW6 460 aaPredicted RBP12.89□□□□□ -0.35
VTI1A-204ENST00000480057 STK36Q9NRP7 1315 aa12.88□□□□□ -0.35
VTI1A-204ENST00000480057 PSME4Q14997 1843 aa12.88□□□□□ -0.35
VTI1A-204ENST00000480057 CALM1P0DP23 149 aa12.88□□□□□ -0.35
VTI1A-204ENST00000480057 CALM2P0DP24 149 aa12.88□□□□□ -0.35
VTI1A-204ENST00000480057 CALM3P0DP25 149 aa12.88□□□□□ -0.35
VTI1A-204ENST00000480057 POLD1P28340 1107 aa12.88□□□□□ -0.35
VTI1A-204ENST00000480057 DOK7Q18PE1 504 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms