RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 MTF1Q14872 753 aa15.48■□□□□ 0.07
C9orf78-205ENST00000480023 TTLL5Q6EMB2 1281 aa15.48■□□□□ 0.07
C9orf78-205ENST00000480023 FOXR1Q6PIV2 292 aa15.48■□□□□ 0.07
C9orf78-205ENST00000480023 LRRC31Q6UY01 552 aa15.48■□□□□ 0.07
C9orf78-205ENST00000480023 RASGRP2Q7LDG7 609 aa15.48■□□□□ 0.07
C9orf78-205ENST00000480023 TRIML1Q8N9V2 468 aa15.48■□□□□ 0.07
C9orf78-205ENST00000480023 ACBD3Q9H3P7 528 aa15.48■□□□□ 0.07
C9orf78-205ENST00000480023 ZSWIM4Q9H7M6 989 aa15.48■□□□□ 0.07
C9orf78-205ENST00000480023 VIPAS39Q9H9C1 493 aa15.48■□□□□ 0.07
C9orf78-205ENST00000480023 PUF60Q9UHX1 559 aaKnown RBP15.48■□□□□ 0.07
C9orf78-205ENST00000480023 AFDNP55196 1824 aaKnown RBP15.48■□□□□ 0.07
C9orf78-205ENST00000480023 FECHP22830 423 aa15.47■□□□□ 0.07
C9orf78-205ENST00000480023 SARSP49591 514 aaKnown RBP15.47■□□□□ 0.07
C9orf78-205ENST00000480023 FMR1Q06787 632 aaKnown RBP eCLIP15.47■□□□□ 0.07
C9orf78-205ENST00000480023 WHAMMP3Q1A5X7 153 aa15.47■□□□□ 0.07
C9orf78-205ENST00000480023 HSP90B2PQ58FF3 399 aa15.47■□□□□ 0.07
C9orf78-205ENST00000480023 WDR93Q6P2C0 686 aa15.47■□□□□ 0.07
C9orf78-205ENST00000480023 MAN1B1Q9UKM7 699 aa15.47■□□□□ 0.07
C9orf78-205ENST00000480023 TBX22Q9Y458 520 aa15.47■□□□□ 0.07
C9orf78-205ENST00000480023 CAMTA1Q9Y6Y1 1673 aa15.47■□□□□ 0.07
C9orf78-205ENST00000480023 CPDO75976 1380 aa15.47■□□□□ 0.07
C9orf78-205ENST00000480023 SOWAHDA6NJG2 315 aa15.47■□□□□ 0.07
C9orf78-205ENST00000480023 M0R2C6 588 aa15.47■□□□□ 0.07
C9orf78-205ENST00000480023 FOXP2O15409 715 aa15.47■□□□□ 0.07
C9orf78-205ENST00000480023 AARSP49588 968 aaKnown RBP eCLIP15.47■□□□□ 0.07
C9orf78-205ENST00000480023 ANTXR2P58335 489 aa15.47■□□□□ 0.07
C9orf78-205ENST00000480023 VSNL1P62760 191 aa15.47■□□□□ 0.07
C9orf78-205ENST00000480023 MORC3Q14149 939 aa15.47■□□□□ 0.07
C9orf78-205ENST00000480023 IMMTQ16891 758 aaKnown RBP15.47■□□□□ 0.07
C9orf78-205ENST00000480023 RAD9BQ6WBX8 426 aa15.47■□□□□ 0.07
C9orf78-205ENST00000480023 CERS3Q8IU89 383 aa15.47■□□□□ 0.07
C9orf78-205ENST00000480023 XAGE3Q8WTP9 111 aa15.47■□□□□ 0.07
C9orf78-205ENST00000480023 TEX13AQ9BXU3 409 aaPredicted RBP15.47■□□□□ 0.07
C9orf78-205ENST00000480023 ESF1Q9H501 851 aaKnown RBP15.47■□□□□ 0.07
C9orf78-205ENST00000480023 CTAGE9A4FU28 777 aa15.46■□□□□ 0.07
C9orf78-205ENST00000480023 PPFIA4O75335 1185 aa15.46■□□□□ 0.07
C9orf78-205ENST00000480023 PIP4K2BP78356 416 aa15.46■□□□□ 0.07
C9orf78-205ENST00000480023 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.46■□□□□ 0.07
C9orf78-205ENST00000480023 SUGCTQ9HAC7 445 aa15.46■□□□□ 0.07
C9orf78-205ENST00000480023 LZTFL1Q9NQ48 299 aa15.46■□□□□ 0.07
C9orf78-205ENST00000480023 CASP7P55210 303 aa15.46■□□□□ 0.06
C9orf78-205ENST00000480023 POSTNQ15063 836 aa15.46■□□□□ 0.06
C9orf78-205ENST00000480023 CT47A1Q5JQC4 288 aaPredicted RBP15.46■□□□□ 0.06
C9orf78-205ENST00000480023 KRT40Q6A162 431 aa15.46■□□□□ 0.06
C9orf78-205ENST00000480023 APTXQ7Z2E3 356 aaKnown RBP15.46■□□□□ 0.06
C9orf78-205ENST00000480023 LRP10Q7Z4F1 713 aa15.46■□□□□ 0.06
C9orf78-205ENST00000480023 SUGP1Q8IWZ8 645 aaKnown RBP15.46■□□□□ 0.06
C9orf78-205ENST00000480023 EFCAB13Q8IY85 973 aa15.46■□□□□ 0.06
C9orf78-205ENST00000480023 CLIC6Q96NY7 704 aa15.46■□□□□ 0.06
C9orf78-205ENST00000480023 MYO1AQ9UBC5 1043 aa15.46■□□□□ 0.06
C9orf78-205ENST00000480023 ZMYM6O95789 1325 aa15.46■□□□□ 0.06
C9orf78-205ENST00000480023 ECM29Q5VYK3 1845 aa15.45■□□□□ 0.06
C9orf78-205ENST00000480023 ERCC5P28715 1186 aaPredicted RBP15.45■□□□□ 0.06
C9orf78-205ENST00000480023 PBX1P40424 430 aa15.45■□□□□ 0.06
C9orf78-205ENST00000480023 COPS6Q7L5N1 327 aa15.45■□□□□ 0.06
C9orf78-205ENST00000480023 ATG9AQ7Z3C6 839 aa15.45■□□□□ 0.06
C9orf78-205ENST00000480023 UBE3BQ7Z3V4 1068 aa15.45■□□□□ 0.06
C9orf78-205ENST00000480023 NCOA7Q8NI08 942 aa15.45■□□□□ 0.06
C9orf78-205ENST00000480023 MED15Q96RN5 788 aa15.45■□□□□ 0.06
C9orf78-205ENST00000480023 ALG1Q9BT22 464 aa15.45■□□□□ 0.06
C9orf78-205ENST00000480023 TTF2Q9UNY4 1162 aaKnown RBP15.45■□□□□ 0.06
C9orf78-205ENST00000480023 CTAGE15A4D2H0 777 aa15.44■□□□□ 0.06
C9orf78-205ENST00000480023 CDKL5O76039 1030 aa15.44■□□□□ 0.06
C9orf78-205ENST00000480023 CTAGE8P0CG41 777 aa15.44■□□□□ 0.06
C9orf78-205ENST00000480023 ATP2B1P20020 1258 aa15.44■□□□□ 0.06
C9orf78-205ENST00000480023 KIF4BQ2VIQ3 1234 aa15.44■□□□□ 0.06
C9orf78-205ENST00000480023 ZNF569Q5MCW4 686 aa15.44■□□□□ 0.06
C9orf78-205ENST00000480023 TTC39AQ5SRH9 613 aa15.44■□□□□ 0.06
C9orf78-205ENST00000480023 ANKRD13DQ6ZTN6 518 aa15.44■□□□□ 0.06
C9orf78-205ENST00000480023 CTAGE6Q86UF2 777 aa15.44■□□□□ 0.06
C9orf78-205ENST00000480023 CTAGE4Q8IX94 777 aa15.44■□□□□ 0.06
C9orf78-205ENST00000480023 KRI1Q8N9T8 703 aaKnown RBP15.44■□□□□ 0.06
C9orf78-205ENST00000480023 OSBP2Q969R2 916 aa15.44■□□□□ 0.06
C9orf78-205ENST00000480023 ARFGEF2Q9Y6D5 1785 aa15.44■□□□□ 0.06
C9orf78-205ENST00000480023 ARHGAP23Q9P227 1491 aa15.44■□□□□ 0.06
C9orf78-205ENST00000480023 FOXN1O15353 648 aa15.44■□□□□ 0.06
C9orf78-205ENST00000480023 HSP90AA4PQ58FG1 418 aa15.44■□□□□ 0.06
C9orf78-205ENST00000480023 CTCFLQ8NI51 663 aaPredicted RBP15.44■□□□□ 0.06
C9orf78-205ENST00000480023 SPATA20Q8TB22 786 aa15.44■□□□□ 0.06
C9orf78-205ENST00000480023 CCDC102AQ96A19 550 aa15.44■□□□□ 0.06
C9orf78-205ENST00000480023 LRRC59Q96AG4 307 aaKnown RBP15.44■□□□□ 0.06
C9orf78-205ENST00000480023 CCDC51Q96ER9 411 aa15.44■□□□□ 0.06
C9orf78-205ENST00000480023 FAM204AQ9H8W3 233 aa15.44■□□□□ 0.06
C9orf78-205ENST00000480023 LRRIQ3A6PVS8 624 aaPredicted RBP15.43■□□□□ 0.06
C9orf78-205ENST00000480023 PLCD1P51178 756 aa15.43■□□□□ 0.06
C9orf78-205ENST00000480023 WWC2Q6AWC2 1192 aa15.43■□□□□ 0.06
C9orf78-205ENST00000480023 ZFP91Q96JP5 570 aaPredicted RBP15.43■□□□□ 0.06
C9orf78-205ENST00000480023 NAPGQ99747 312 aaPredicted RBP15.43■□□□□ 0.06
C9orf78-205ENST00000480023 NCAPGQ9BPX3 1015 aa15.43■□□□□ 0.06
C9orf78-205ENST00000480023 KDM6AO15550 1401 aaPredicted RBP15.43■□□□□ 0.06
C9orf78-205ENST00000480023 SETD1BQ9UPS6 1966 aaKnown RBP15.43■□□□□ 0.06
C9orf78-205ENST00000480023 MFAP3LO75121 409 aa15.43■□□□□ 0.06
C9orf78-205ENST00000480023 PRPF6O94906 941 aaKnown RBP15.43■□□□□ 0.06
C9orf78-205ENST00000480023 AMPD2Q01433 879 aa15.43■□□□□ 0.06
C9orf78-205ENST00000480023 ZNF790Q6PG37 636 aa15.43■□□□□ 0.06
C9orf78-205ENST00000480023 KCNH5Q8NCM2 988 aa15.43■□□□□ 0.06
C9orf78-205ENST00000480023 AIFM3Q96NN9 605 aa15.43■□□□□ 0.06
C9orf78-205ENST00000480023 SAMSN1Q9NSI8 373 aaKnown RBP15.43■□□□□ 0.06
C9orf78-205ENST00000480023 WDR17Q8IZU2 1322 aa15.42■□□□□ 0.06
C9orf78-205ENST00000480023 A0A0U1RQJ8 604 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms