RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 TFCP2L1Q9NZI6 479 aa12.47□□□□□ -0.41
CHD6-208ENST00000480022 COL15A1P39059 1388 aa12.46□□□□□ -0.41
CHD6-208ENST00000480022 PNMA6EA0A0J9YXQ4 647 aa12.46□□□□□ -0.41
CHD6-208ENST00000480022 SLC15A2Q16348 729 aa12.46□□□□□ -0.41
CHD6-208ENST00000480022 FAM177A1Q8N128 213 aaPredicted RBP12.46□□□□□ -0.41
CHD6-208ENST00000480022 MYH14Q7Z406 1995 aaKnown RBP12.46□□□□□ -0.42
CHD6-208ENST00000480022 VWA3AA6NCI4 1184 aa12.46□□□□□ -0.42
CHD6-208ENST00000480022 ERLIN1O75477 346 aa12.46□□□□□ -0.42
CHD6-208ENST00000480022 TTLL5Q6EMB2 1281 aa12.46□□□□□ -0.42
CHD6-208ENST00000480022 NUTM1Q86Y26 1132 aa12.46□□□□□ -0.42
CHD6-208ENST00000480022 BICC1Q9H694 974 aaKnown RBP12.46□□□□□ -0.42
CHD6-208ENST00000480022 STK32BQ9NY57 414 aa12.46□□□□□ -0.42
CHD6-208ENST00000480022 NUP188Q5SRE5 1749 aa12.46□□□□□ -0.42
CHD6-208ENST00000480022 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.45□□□□□ -0.42
CHD6-208ENST00000480022 HNRNPH1P31943 449 aaKnown RBP12.45□□□□□ -0.42
CHD6-208ENST00000480022 GNG11P61952 73 aa12.45□□□□□ -0.42
CHD6-208ENST00000480022 ARHGEF1Q92888 912 aaKnown RBP12.45□□□□□ -0.42
CHD6-208ENST00000480022 KCNB2Q92953 911 aa12.45□□□□□ -0.42
CHD6-208ENST00000480022 FBXW7Q969H0 707 aa12.45□□□□□ -0.42
CHD6-208ENST00000480022 UTP14AQ9BVJ6 771 aaKnown RBP12.45□□□□□ -0.42
CHD6-208ENST00000480022 PLEKHA4Q9H4M7 779 aa12.45□□□□□ -0.42
CHD6-208ENST00000480022 IL1RAPL2Q9NP60 686 aa12.45□□□□□ -0.42
CHD6-208ENST00000480022 POTEB2H3BUK9 544 aa12.45□□□□□ -0.42
CHD6-208ENST00000480022 RESTQ13127 1097 aa12.45□□□□□ -0.42
CHD6-208ENST00000480022 TRAPPC3LQ5T215 181 aa12.45□□□□□ -0.42
CHD6-208ENST00000480022 KAT2BQ92831 832 aa12.45□□□□□ -0.42
CHD6-208ENST00000480022 TBC1D2BQ9UPU7 963 aa12.45□□□□□ -0.42
CHD6-208ENST00000480022 GOLGA6L9A6NEM1 432 aa12.44□□□□□ -0.42
CHD6-208ENST00000480022 F6X3S4 739 aa12.44□□□□□ -0.42
CHD6-208ENST00000480022 RAB11FIP3O75154 756 aa12.44□□□□□ -0.42
CHD6-208ENST00000480022 ZKSCAN1P17029 563 aaPredicted RBP12.44□□□□□ -0.42
CHD6-208ENST00000480022 USP5P45974 858 aa12.44□□□□□ -0.42
CHD6-208ENST00000480022 DZIP3Q86Y13 1208 aaKnown RBP12.44□□□□□ -0.42
CHD6-208ENST00000480022 PI4K2BQ8TCG2 481 aa12.44□□□□□ -0.42
CHD6-208ENST00000480022 RUFY2Q8WXA3 655 aa12.44□□□□□ -0.42
CHD6-208ENST00000480022 CCDC102AQ96A19 550 aa12.44□□□□□ -0.42
CHD6-208ENST00000480022 WDR24Q96S15 920 aa12.44□□□□□ -0.42
CHD6-208ENST00000480022 GOLPH3LQ9H4A5 285 aa12.44□□□□□ -0.42
CHD6-208ENST00000480022 ADRA2BP18089 450 aa12.44□□□□□ -0.42
CHD6-208ENST00000480022 PTH1RQ03431 593 aa12.44□□□□□ -0.42
CHD6-208ENST00000480022 LRCH2Q5VUJ6 765 aa12.44□□□□□ -0.42
CHD6-208ENST00000480022 BPIFA3Q9BQP9 254 aa12.44□□□□□ -0.42
CHD6-208ENST00000480022 TACO1Q9BSH4 297 aaKnown RBP12.44□□□□□ -0.42
CHD6-208ENST00000480022 L1RE1Q9UN81 338 aa12.44□□□□□ -0.42
CHD6-208ENST00000480022 A0A087WZG4 1122 aa12.43□□□□□ -0.42
CHD6-208ENST00000480022 FAM160A1Q05DH4 1040 aa12.43□□□□□ -0.42
CHD6-208ENST00000480022 ANKRD13DQ6ZTN6 518 aa12.43□□□□□ -0.42
CHD6-208ENST00000480022 ACBD3Q9H3P7 528 aa12.43□□□□□ -0.42
CHD6-208ENST00000480022 RAB21Q9UL25 225 aa12.43□□□□□ -0.42
CHD6-208ENST00000480022 PPP2R2CQ9Y2T4 447 aa12.43□□□□□ -0.42
CHD6-208ENST00000480022 PI4KAP2A4QPH2 592 aa12.43□□□□□ -0.42
CHD6-208ENST00000480022 PPP1R12AO14974 1030 aaPredicted RBP12.43□□□□□ -0.42
CHD6-208ENST00000480022 DDX58O95786 925 aaKnown RBP12.43□□□□□ -0.42
CHD6-208ENST00000480022 LIG3P49916 1009 aa12.43□□□□□ -0.42
CHD6-208ENST00000480022 ANKRD1Q15327 319 aa12.43□□□□□ -0.42
CHD6-208ENST00000480022 KIF6Q6ZMV9 814 aa12.43□□□□□ -0.42
CHD6-208ENST00000480022 PNPLA7Q6ZV29 1317 aa12.43□□□□□ -0.42
CHD6-208ENST00000480022 PI4KAP1Q8N8J0 262 aa12.43□□□□□ -0.42
CHD6-208ENST00000480022 ZBTB3Q9H5J0 574 aa12.43□□□□□ -0.42
CHD6-208ENST00000480022 FAM204AQ9H8W3 233 aa12.43□□□□□ -0.42
CHD6-208ENST00000480022 MAP3K15Q6ZN16 1313 aa12.43□□□□□ -0.42
CHD6-208ENST00000480022 CAMTA2O94983 1202 aa12.43□□□□□ -0.42
CHD6-208ENST00000480022 CHMP4BP1P59074 171 aa12.43□□□□□ -0.42
CHD6-208ENST00000480022 KSR2Q6VAB6 950 aa12.43□□□□□ -0.42
CHD6-208ENST00000480022 COL23A1Q86Y22 540 aaPredicted RBP12.43□□□□□ -0.42
CHD6-208ENST00000480022 PLBD2Q8NHP8 589 aa12.43□□□□□ -0.42
CHD6-208ENST00000480022 DHX58Q96C10 678 aa12.43□□□□□ -0.42
CHD6-208ENST00000480022 SRP68Q9UHB9 627 aaKnown RBP12.43□□□□□ -0.42
CHD6-208ENST00000480022 PHACTR2O75167 634 aa12.42□□□□□ -0.42
CHD6-208ENST00000480022 RFC4P35249 363 aa12.42□□□□□ -0.42
CHD6-208ENST00000480022 CEBPZQ03701 1054 aaKnown RBP12.42□□□□□ -0.42
CHD6-208ENST00000480022 KCNV1Q6PIU1 500 aa12.42□□□□□ -0.42
CHD6-208ENST00000480022 RIC3Q7Z5B4 369 aa12.42□□□□□ -0.42
CHD6-208ENST00000480022 ENGASEQ8NFI3 743 aa12.42□□□□□ -0.42
CHD6-208ENST00000480022 ANKZF1Q9H8Y5 726 aa12.42□□□□□ -0.42
CHD6-208ENST00000480022 RAI14Q9P0K7 980 aa12.42□□□□□ -0.42
CHD6-208ENST00000480022 NARFQ9UHQ1 456 aa12.42□□□□□ -0.42
CHD6-208ENST00000480022 MAP3K2Q9Y2U5 619 aa12.42□□□□□ -0.42
CHD6-208ENST00000480022 GOLIM4O00461 696 aa12.42□□□□□ -0.42
CHD6-208ENST00000480022 ARHGAP6O43182 974 aa12.42□□□□□ -0.42
CHD6-208ENST00000480022 PSMA5P28066 241 aa12.42□□□□□ -0.42
CHD6-208ENST00000480022 HLFQ16534 295 aa12.42□□□□□ -0.42
CHD6-208ENST00000480022 SRGAP1Q7Z6B7 1085 aa12.42□□□□□ -0.42
CHD6-208ENST00000480022 GIMAP7Q8NHV1 300 aa12.42□□□□□ -0.42
CHD6-208ENST00000480022 ERCC4Q92889 916 aaPredicted RBP12.42□□□□□ -0.42
CHD6-208ENST00000480022 KIFC2Q96AC6 838 aa12.42□□□□□ -0.42
CHD6-208ENST00000480022 ABCB6Q9NP58 842 aa12.42□□□□□ -0.42
CHD6-208ENST00000480022 RCOR1Q9UKL0 485 aa12.42□□□□□ -0.42
CHD6-208ENST00000480022 USP42Q9H9J4 1324 aaKnown RBP12.41□□□□□ -0.42
CHD6-208ENST00000480022 ERVV-1B6SEH8 477 aa12.41□□□□□ -0.42
CHD6-208ENST00000480022 H3BQV1 296 aa12.41□□□□□ -0.42
CHD6-208ENST00000480022 FANCCQ00597 558 aa12.41□□□□□ -0.42
CHD6-208ENST00000480022 CASP8Q14790 479 aa12.41□□□□□ -0.42
CHD6-208ENST00000480022 PPP2R5AQ15172 486 aa12.41□□□□□ -0.42
CHD6-208ENST00000480022 NECTIN1Q15223 517 aa12.41□□□□□ -0.42
CHD6-208ENST00000480022 IFFO2Q5TF58 517 aa12.41□□□□□ -0.42
CHD6-208ENST00000480022 GBP6Q6ZN66 633 aa12.41□□□□□ -0.42
CHD6-208ENST00000480022 MSANTD4Q8NCY6 345 aa12.41□□□□□ -0.42
CHD6-208ENST00000480022 FLAD1Q8NFF5 587 aa12.41□□□□□ -0.42
CHD6-208ENST00000480022 STAG1Q8WVM7 1258 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms