RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 MAST3O60307 1309 aa11.59□□□□□ -0.55
CD46-214ENST00000480003 ZNF532Q9HCE3 1301 aa11.59□□□□□ -0.55
CD46-214ENST00000480003 PSME4Q14997 1843 aa11.58□□□□□ -0.56
CD46-214ENST00000480003 EGFRP00533 1210 aa11.58□□□□□ -0.56
CD46-214ENST00000480003 CYP7A1P22680 504 aa11.58□□□□□ -0.56
CD46-214ENST00000480003 CHMLP26374 656 aa11.58□□□□□ -0.56
CD46-214ENST00000480003 HIRAP54198 1017 aaPredicted RBP11.58□□□□□ -0.56
CD46-214ENST00000480003 LRRFIP1Q32MZ4 808 aaKnown RBP11.58□□□□□ -0.56
CD46-214ENST00000480003 ARSIQ5FYB1 569 aa11.58□□□□□ -0.56
CD46-214ENST00000480003 SAMD7Q7Z3H4 446 aa11.58□□□□□ -0.56
CD46-214ENST00000480003 TEKT1Q969V4 418 aa11.58□□□□□ -0.56
CD46-214ENST00000480003 FSD1Q9BTV5 496 aa11.58□□□□□ -0.56
CD46-214ENST00000480003 PUS7LQ9H0K6 701 aaKnown RBP11.58□□□□□ -0.56
CD46-214ENST00000480003 MYOZ2Q9NPC6 264 aa11.58□□□□□ -0.56
CD46-214ENST00000480003 DAGLAQ9Y4D2 1042 aa11.58□□□□□ -0.56
CD46-214ENST00000480003 WNT10BO00744 389 aa11.57□□□□□ -0.56
CD46-214ENST00000480003 RHBDL3P58872 404 aa11.57□□□□□ -0.56
CD46-214ENST00000480003 DLGAP5Q15398 846 aa11.57□□□□□ -0.56
CD46-214ENST00000480003 DZIP1Q86YF9 867 aaKnown RBP11.57□□□□□ -0.56
CD46-214ENST00000480003 APPBP2Q92624 585 aa11.57□□□□□ -0.56
CD46-214ENST00000480003 RIOK1Q9BRS2 568 aaKnown RBP11.57□□□□□ -0.56
CD46-214ENST00000480003 RRAGCQ9HB90 399 aa11.57□□□□□ -0.56
CD46-214ENST00000480003 HELLSQ9NRZ9 838 aa11.57□□□□□ -0.56
CD46-214ENST00000480003 ADARB2Q9NS39 739 aaKnown RBP11.57□□□□□ -0.56
CD46-214ENST00000480003 PGAP2Q9UHJ9 254 aa11.57□□□□□ -0.56
CD46-214ENST00000480003 HACL1Q9UJ83 578 aa11.57□□□□□ -0.56
CD46-214ENST00000480003 MROH7-TTC4A0A0A0MT08 1334 aa11.57□□□□□ -0.56
CD46-214ENST00000480003 RFX7Q2KHR2 1363 aa11.56□□□□□ -0.56
CD46-214ENST00000480003 HIP1O00291 1037 aa11.56□□□□□ -0.56
CD46-214ENST00000480003 VEGFAP15692 232 aaPredicted RBP11.56□□□□□ -0.56
CD46-214ENST00000480003 LMOD1P29536 600 aaPredicted RBP11.56□□□□□ -0.56
CD46-214ENST00000480003 DYNLL1P63167 89 aaKnown RBP11.56□□□□□ -0.56
CD46-214ENST00000480003 NBPF9Q3BBW0 867 aa11.56□□□□□ -0.56
CD46-214ENST00000480003 VARS2Q5ST30 1063 aaKnown RBP11.56□□□□□ -0.56
CD46-214ENST00000480003 RBM26Q5T8P6 1007 aaKnown RBP11.56□□□□□ -0.56
CD46-214ENST00000480003 CDC42EP5Q6NZY7 148 aa11.56□□□□□ -0.56
CD46-214ENST00000480003 USP50Q70EL3 339 aaPredicted RBP11.56□□□□□ -0.56
CD46-214ENST00000480003 TRPM4Q8TD43 1214 aa11.56□□□□□ -0.56
CD46-214ENST00000480003 KHSRPQ92945 711 aaKnown RBP eCLIP11.56□□□□□ -0.565e-9■■□□□ 13.9
CD46-214ENST00000480003 SEC62Q99442 399 aaKnown RBP11.56□□□□□ -0.56
CD46-214ENST00000480003 TAF1DQ9H5J8 278 aaPredicted RBP11.56□□□□□ -0.56
CD46-214ENST00000480003 MYO5AQ9Y4I1 1855 aaKnown RBP11.55□□□□□ -0.56
CD46-214ENST00000480003 IQCA1LA6NCM1 817 aa11.55□□□□□ -0.56
CD46-214ENST00000480003 EPHX2P34913 555 aa11.55□□□□□ -0.56
CD46-214ENST00000480003 BTDP43251 543 aa11.55□□□□□ -0.56
CD46-214ENST00000480003 RBM5P52756 815 aaKnown RBP eCLIP11.55□□□□□ -0.564e-21■■■■□ 19.4
CD46-214ENST00000480003 NMIQ13287 307 aaPredicted RBP11.55□□□□□ -0.56
CD46-214ENST00000480003 MCMDC2Q4G0Z9 681 aa11.55□□□□□ -0.56
CD46-214ENST00000480003 TBC1D10BQ4KMP7 808 aaPredicted RBP11.55□□□□□ -0.56
CD46-214ENST00000480003 FAM227BQ96M60 508 aa11.55□□□□□ -0.56
CD46-214ENST00000480003 STRBPQ96SI9 672 aaKnown RBP11.55□□□□□ -0.56
CD46-214ENST00000480003 RYDENQ9NUL5 291 aaKnown RBP11.55□□□□□ -0.56
CD46-214ENST00000480003 ZNF70Q9UC06 446 aaPredicted RBP11.55□□□□□ -0.56
CD46-214ENST00000480003 A0A0D9SFI3 127 aa11.54□□□□□ -0.56
CD46-214ENST00000480003 BAG3O95817 575 aa11.54□□□□□ -0.56
CD46-214ENST00000480003 KIF4BQ2VIQ3 1234 aa11.54□□□□□ -0.56
CD46-214ENST00000480003 MIGA1Q8NAN2 632 aa11.54□□□□□ -0.56
CD46-214ENST00000480003 ZC3H15Q8WU90 426 aaKnown RBP11.54□□□□□ -0.56
CD46-214ENST00000480003 IDI2Q9BXS1 227 aa11.54□□□□□ -0.56
CD46-214ENST00000480003 IL25Q9H293 177 aa11.54□□□□□ -0.56
CD46-214ENST00000480003 TDRD3Q9H7E2 651 aaKnown RBP11.54□□□□□ -0.56
CD46-214ENST00000480003 NMRK2Q9NPI5 230 aa11.54□□□□□ -0.56
CD46-214ENST00000480003 USP40Q9NVE5 1235 aa11.54□□□□□ -0.56
CD46-214ENST00000480003 AATFQ9NY61 560 aaKnown RBP eCLIP11.54□□□□□ -0.564e-6■□□□□ 10.1
CD46-214ENST00000480003 MYH13Q9UKX3 1938 aa11.53□□□□□ -0.56
CD46-214ENST00000480003 WDR90Q96KV7 1748 aa11.53□□□□□ -0.56
CD46-214ENST00000480003 MAGEB6P1A0A0J9YX57 407 aa11.53□□□□□ -0.56
CD46-214ENST00000480003 M0R2C6 588 aa11.53□□□□□ -0.56
CD46-214ENST00000480003 CDC45O75419 566 aa11.53□□□□□ -0.56
CD46-214ENST00000480003 WDHD1O75717 1129 aaPredicted RBP11.53□□□□□ -0.56
CD46-214ENST00000480003 APLP1P51693 650 aa11.53□□□□□ -0.56
CD46-214ENST00000480003 FKBP1CQ5VVH2 108 aa11.53□□□□□ -0.56
CD46-214ENST00000480003 CWC27Q6UX04 472 aaKnown RBP11.53□□□□□ -0.56
CD46-214ENST00000480003 PNMA8AQ86V59 439 aaPredicted RBP11.53□□□□□ -0.56
CD46-214ENST00000480003 CERS3Q8IU89 383 aa11.53□□□□□ -0.56
CD46-214ENST00000480003 SPNS2Q8IVW8 549 aa11.53□□□□□ -0.56
CD46-214ENST00000480003 LCORLQ8N3X6 602 aa11.53□□□□□ -0.56
CD46-214ENST00000480003 SH3RF3Q8TEJ3 882 aaPredicted RBP11.53□□□□□ -0.56
CD46-214ENST00000480003 DIAPH3Q9NSV4 1193 aa11.53□□□□□ -0.56
CD46-214ENST00000480003 MKRN1Q9UHC7 482 aaKnown RBP11.53□□□□□ -0.56
CD46-214ENST00000480003 DOCK2Q92608 1830 aa11.53□□□□□ -0.56
CD46-214ENST00000480003 TIAM2Q8IVF5 1701 aa11.52□□□□□ -0.56
CD46-214ENST00000480003 PATL2C9JE40 543 aaKnown RBP11.52□□□□□ -0.57
CD46-214ENST00000480003 SGSM2O43147 1006 aa11.52□□□□□ -0.57
CD46-214ENST00000480003 GPAA1O43292 621 aa11.52□□□□□ -0.57
CD46-214ENST00000480003 TOMM70O94826 608 aa11.52□□□□□ -0.57
CD46-214ENST00000480003 MBD4O95243 580 aa11.52□□□□□ -0.57
CD46-214ENST00000480003 SLC34A2O95436 690 aa11.52□□□□□ -0.57
CD46-214ENST00000480003 ZNF589Q86UQ0 364 aaPredicted RBP11.52□□□□□ -0.57
CD46-214ENST00000480003 RUFY2Q8WXA3 655 aa11.52□□□□□ -0.57
CD46-214ENST00000480003 AIDAQ96BJ3 306 aa11.52□□□□□ -0.57
CD46-214ENST00000480003 ARMT1Q9H993 441 aa11.52□□□□□ -0.57
CD46-214ENST00000480003 FAM198AQ9UFP1 575 aa11.52□□□□□ -0.57
CD46-214ENST00000480003 ASTN2O75129 1339 aaPredicted RBP11.52□□□□□ -0.57
CD46-214ENST00000480003 CEP350Q5VT06 3117 aa11.52□□□□□ -0.57
CD46-214ENST00000480003 MYH2Q9UKX2 1941 aa11.51□□□□□ -0.57
CD46-214ENST00000480003 GSG1L2A8MUP6 293 aa11.51□□□□□ -0.57
CD46-214ENST00000480003 FOXP2O15409 715 aa11.51□□□□□ -0.57
CD46-214ENST00000480003 PRKAB2O43741 272 aa11.51□□□□□ -0.57
CD46-214ENST00000480003 NFIAQ12857 509 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 465.5 ms