RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 GOLGB1Q14789 3259 aaKnown RBP16.94■□□□□ 0.3
CLDN18-203ENST00000479660 KIAA1551Q9HCM1 1747 aa16.94■□□□□ 0.3
CLDN18-203ENST00000479660 IFIT3O14879 490 aaKnown RBP16.94■□□□□ 0.3
CLDN18-203ENST00000479660 USP5P45974 858 aa16.94■□□□□ 0.3
CLDN18-203ENST00000479660 HMGN5P82970 282 aaKnown RBP16.94■□□□□ 0.3
CLDN18-203ENST00000479660 FAM184AQ8NB25 1140 aa16.94■□□□□ 0.3
CLDN18-203ENST00000479660 C7orf43Q8WVR3 580 aa16.94■□□□□ 0.3
CLDN18-203ENST00000479660 ARPP21Q9UBL0 812 aaPredicted RBP16.94■□□□□ 0.3
CLDN18-203ENST00000479660 MYH2Q9UKX2 1941 aa16.93■□□□□ 0.3
CLDN18-203ENST00000479660 DHX16O60231 1041 aaKnown RBP16.93■□□□□ 0.3
CLDN18-203ENST00000479660 LIFRP42702 1097 aa16.93■□□□□ 0.3
CLDN18-203ENST00000479660 SART3Q15020 963 aaKnown RBP16.93■□□□□ 0.3
CLDN18-203ENST00000479660 NFXL1Q6ZNB6 911 aa16.93■□□□□ 0.3
CLDN18-203ENST00000479660 CERS3Q8IU89 383 aa16.93■□□□□ 0.3
CLDN18-203ENST00000479660 ESR2Q92731 530 aa16.93■□□□□ 0.3
CLDN18-203ENST00000479660 FAM163AQ96GL9 167 aaPredicted RBP16.93■□□□□ 0.3
CLDN18-203ENST00000479660 LY9Q9HBG7 655 aa16.93■□□□□ 0.3
CLDN18-203ENST00000479660 MCM9Q9NXL9 1143 aa16.93■□□□□ 0.3
CLDN18-203ENST00000479660 HPS5Q9UPZ3 1129 aa16.93■□□□□ 0.3
CLDN18-203ENST00000479660 SUGT1Q9Y2Z0 365 aa16.93■□□□□ 0.3
CLDN18-203ENST00000479660 ATP6V1DQ9Y5K8 247 aa16.93■□□□□ 0.3
CLDN18-203ENST00000479660 GPR75-ASB3A0A0A6YYF3 556 aa16.92■□□□□ 0.3
CLDN18-203ENST00000479660 PTPDC1A2A3K4 754 aa16.92■□□□□ 0.3
CLDN18-203ENST00000479660 PCP11498 1178 aaKnown RBP16.92■□□□□ 0.3
CLDN18-203ENST00000479660 BTDP43251 543 aa16.92■□□□□ 0.3
CLDN18-203ENST00000479660 SBK1Q52WX2 424 aa16.92■□□□□ 0.3
CLDN18-203ENST00000479660 PODNQ7Z5L7 613 aa16.92■□□□□ 0.3
CLDN18-203ENST00000479660 SGMS1Q86VZ5 419 aa16.92■□□□□ 0.3
CLDN18-203ENST00000479660 RAB11FIP4Q86YS3 637 aa16.92■□□□□ 0.3
CLDN18-203ENST00000479660 DBNDD1Q9H9R9 158 aa16.92■□□□□ 0.3
CLDN18-203ENST00000479660 SENP2Q9HC62 589 aa16.92■□□□□ 0.3
CLDN18-203ENST00000479660 C10orf71Q711Q0 1435 aa16.92■□□□□ 0.3
CLDN18-203ENST00000479660 SKOR2Q2VWA4 1001 aaPredicted RBP16.92■□□□□ 0.3
CLDN18-203ENST00000479660 CC2D2BQ6DHV5 1058 aa16.92■□□□□ 0.3
CLDN18-203ENST00000479660 ZKSCAN3Q9BRR0 538 aa16.92■□□□□ 0.3
CLDN18-203ENST00000479660 MTA3Q9BTC8 594 aa16.92■□□□□ 0.3
CLDN18-203ENST00000479660 MKRN1Q9UHC7 482 aaKnown RBP16.92■□□□□ 0.3
CLDN18-203ENST00000479660 ERICH2A1L162 156 aa16.91■□□□□ 0.3
CLDN18-203ENST00000479660 PRPF40AO75400 957 aaKnown RBP16.91■□□□□ 0.3
CLDN18-203ENST00000479660 SLC3A2P08195 630 aaKnown RBP16.91■□□□□ 0.3
CLDN18-203ENST00000479660 FGRP09769 529 aa16.91■□□□□ 0.3
CLDN18-203ENST00000479660 APOA5Q6Q788 366 aa16.91■□□□□ 0.3
CLDN18-203ENST00000479660 TTLL6Q8N841 843 aa16.91■□□□□ 0.3
CLDN18-203ENST00000479660 TGFBRAP1Q8WUH2 860 aa16.91■□□□□ 0.3
CLDN18-203ENST00000479660 LMBRD1Q9NUN5 540 aa16.91■□□□□ 0.3
CLDN18-203ENST00000479660 KIF3AQ9Y496 699 aa16.91■□□□□ 0.3
CLDN18-203ENST00000479660 CCDC69A6NI79 296 aa16.91■□□□□ 0.3
CLDN18-203ENST00000479660 CPLX1O14810 134 aa16.91■□□□□ 0.3
CLDN18-203ENST00000479660 C21orf2O43822 256 aa16.91■□□□□ 0.3
CLDN18-203ENST00000479660 PRDM1O75626 825 aa16.91■□□□□ 0.3
CLDN18-203ENST00000479660 USP17L8P0C7I0 530 aa16.91■□□□□ 0.3
CLDN18-203ENST00000479660 PLCG2P16885 1265 aa16.91■□□□□ 0.3
CLDN18-203ENST00000479660 CDC37L1Q7L3B6 337 aa16.91■□□□□ 0.3
CLDN18-203ENST00000479660 CERS5Q8N5B7 392 aa16.91■□□□□ 0.3
CLDN18-203ENST00000479660 GAKO14976 1311 aa16.9■□□□□ 0.3
CLDN18-203ENST00000479660 F8W031 263 aaPredicted RBP16.9■□□□□ 0.3
CLDN18-203ENST00000479660 RANBP6O60518 1105 aaKnown RBP16.9■□□□□ 0.3
CLDN18-203ENST00000479660 PPFIA3O75145 1194 aa16.9■□□□□ 0.3
CLDN18-203ENST00000479660 ZBTB7AO95365 584 aa16.9■□□□□ 0.3
CLDN18-203ENST00000479660 CYP2D6P10635 497 aa16.9■□□□□ 0.3
CLDN18-203ENST00000479660 METAP2P50579 478 aaKnown RBP eCLIP16.9■□□□□ 0.3
CLDN18-203ENST00000479660 EVX2Q03828 476 aa16.9■□□□□ 0.3
CLDN18-203ENST00000479660 GSE1Q14687 1217 aa16.9■□□□□ 0.3
CLDN18-203ENST00000479660 WTAPQ15007 396 aa16.9■□□□□ 0.3
CLDN18-203ENST00000479660 TMTC2Q8N394 836 aa16.9■□□□□ 0.3
CLDN18-203ENST00000479660 UBAC1Q9BSL1 405 aa16.9■□□□□ 0.3
CLDN18-203ENST00000479660 MXD3Q9BW11 206 aa16.9■□□□□ 0.3
CLDN18-203ENST00000479660 SLC12A7Q9Y666 1083 aa16.9■□□□□ 0.3
CLDN18-203ENST00000479660 ZBTB43O43298 467 aa16.89■□□□□ 0.29
CLDN18-203ENST00000479660 MICU3Q86XE3 530 aa16.89■□□□□ 0.29
CLDN18-203ENST00000479660 TTF2Q9UNY4 1162 aaKnown RBP16.89■□□□□ 0.29
CLDN18-203ENST00000479660 H3BQV1 296 aa16.89■□□□□ 0.29
CLDN18-203ENST00000479660 DPEP1P16444 411 aa16.89■□□□□ 0.29
CLDN18-203ENST00000479660 RXRAP19793 462 aa16.89■□□□□ 0.29
CLDN18-203ENST00000479660 PDE4BQ07343 736 aa16.89■□□□□ 0.29
CLDN18-203ENST00000479660 SLC4A8Q2Y0W8 1093 aa16.89■□□□□ 0.29
CLDN18-203ENST00000479660 IFFO2Q5TF58 517 aa16.89■□□□□ 0.29
CLDN18-203ENST00000479660 C12orf60Q5U649 245 aa16.89■□□□□ 0.29
CLDN18-203ENST00000479660 SYNE3Q6ZMZ3 975 aa16.89■□□□□ 0.29
CLDN18-203ENST00000479660 MAPKAPK5Q8IW41 473 aa16.89■□□□□ 0.29
CLDN18-203ENST00000479660 AMOTL1Q8IY63 956 aa16.89■□□□□ 0.29
CLDN18-203ENST00000479660 TEX11Q8IYF3 940 aa16.89■□□□□ 0.29
CLDN18-203ENST00000479660 KCNQ5Q9NR82 932 aa16.89■□□□□ 0.29
CLDN18-203ENST00000479660 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.89■□□□□ 0.29
CLDN18-203ENST00000479660 DAGLAQ9Y4D2 1042 aa16.89■□□□□ 0.29
CLDN18-203ENST00000479660 DDX49Q9Y6V7 483 aaKnown RBP16.89■□□□□ 0.29
CLDN18-203ENST00000479660 ORC4O43929 436 aa16.88■□□□□ 0.29
CLDN18-203ENST00000479660 ECE2O60344 883 aa16.88■□□□□ 0.29
CLDN18-203ENST00000479660 RHBDL3P58872 404 aa16.88■□□□□ 0.29
CLDN18-203ENST00000479660 FERMT3Q86UX7 667 aa16.88■□□□□ 0.29
CLDN18-203ENST00000479660 IQCA1Q86XH1 822 aa16.88■□□□□ 0.29
CLDN18-203ENST00000479660 SUPT20HQ8NEM7 779 aa16.88■□□□□ 0.29
CLDN18-203ENST00000479660 GZF1Q9H116 711 aaPredicted RBP16.88■□□□□ 0.29
CLDN18-203ENST00000479660 FDPSP14324 419 aaKnown RBP16.87■□□□□ 0.29
CLDN18-203ENST00000479660 KCNA3P22001 575 aa16.87■□□□□ 0.29
CLDN18-203ENST00000479660 ADD1P35611 737 aaKnown RBP16.87■□□□□ 0.29
CLDN18-203ENST00000479660 AOC3Q16853 763 aa16.87■□□□□ 0.29
CLDN18-203ENST00000479660 MYL10Q9BUA6 226 aa16.87■□□□□ 0.29
CLDN18-203ENST00000479660 ATF5Q9Y2D1 282 aaPredicted RBP16.87■□□□□ 0.29
CLDN18-203ENST00000479660 TNKSO95271 1327 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms