RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	CCL15	Q16663	113 aa		18.46	■□□□□ 0.55
CCNL1-222	ENST00000479596	CCDC158	Q5M9N0	1113 aa		18.46	■□□□□ 0.55
CCNL1-222	ENST00000479596	SIRT2	Q8IXJ6	389 aa		18.46	■□□□□ 0.55
CCNL1-222	ENST00000479596	CCDC8	Q9H0W5	538 aa	Predicted RBP	18.46	■□□□□ 0.55
CCNL1-222	ENST00000479596	RAI14	Q9P0K7	980 aa		18.46	■□□□□ 0.55
CCNL1-222	ENST00000479596	GSTO1	P78417	241 aa		18.45	■□□□□ 0.54
CCNL1-222	ENST00000479596	PPIL2	Q13356	520 aa		18.45	■□□□□ 0.54
CCNL1-222	ENST00000479596	NOL9	Q5SY16	702 aa	Known RBP	18.45	■□□□□ 0.54
CCNL1-222	ENST00000479596	C20orf194	Q5TEA3	1177 aa		18.45	■□□□□ 0.54
CCNL1-222	ENST00000479596	OTUD7B	Q6GQQ9	843 aa		18.45	■□□□□ 0.54
CCNL1-222	ENST00000479596	FAM43A	Q8N2R8	423 aa		18.45	■□□□□ 0.54
CCNL1-222	ENST00000479596	DDX19B	Q9UMR2	479 aa		18.45	■□□□□ 0.54
CCNL1-222	ENST00000479596	PHF20L1	A8MW92	1017 aa		18.44	■□□□□ 0.54
CCNL1-222	ENST00000479596	ZAP70	P43403	619 aa		18.44	■□□□□ 0.54
CCNL1-222	ENST00000479596	MAP3K10	Q02779	954 aa		18.44	■□□□□ 0.54
CCNL1-222	ENST00000479596	PPAT	Q06203	517 aa		18.44	■□□□□ 0.54
CCNL1-222	ENST00000479596	PICALM	Q13492	652 aa		18.44	■□□□□ 0.54
CCNL1-222	ENST00000479596	LRP2BP	Q9P2M1	347 aa		18.44	■□□□□ 0.54
CCNL1-222	ENST00000479596	NPM3	O75607	178 aa	Known RBP	18.43	■□□□□ 0.54
CCNL1-222	ENST00000479596	LDHC	P07864	332 aa		18.43	■□□□□ 0.54
CCNL1-222	ENST00000479596	CAP1	Q01518	475 aa		18.43	■□□□□ 0.54
CCNL1-222	ENST00000479596	ADGRA1	Q86SQ6	560 aa		18.43	■□□□□ 0.54
CCNL1-222	ENST00000479596	PIH1D3	Q9NQM4	214 aa	Known RBP	18.43	■□□□□ 0.54
CCNL1-222	ENST00000479596	AK9	Q5TCS8	1911 aa		18.43	■□□□□ 0.54
CCNL1-222	ENST00000479596	COL2A1	P02458	1487 aa	Predicted RBP	18.42	■□□□□ 0.54
CCNL1-222	ENST00000479596	SNAPC2	Q13487	334 aa		18.42	■□□□□ 0.54
CCNL1-222	ENST00000479596	PKN2	Q16513	984 aa	Known RBP	18.42	■□□□□ 0.54
CCNL1-222	ENST00000479596	ERC1	Q8IUD2	1116 aa		18.42	■□□□□ 0.54
CCNL1-222	ENST00000479596	RPAP2	Q8IXW5	612 aa	Predicted RBP	18.42	■□□□□ 0.54
CCNL1-222	ENST00000479596	HPS5	Q9UPZ3	1129 aa		18.42	■□□□□ 0.54
CCNL1-222	ENST00000479596	KCNH4	Q9UQ05	1017 aa		18.42	■□□□□ 0.54
CCNL1-222	ENST00000479596	MYO5A	Q9Y4I1	1855 aa	Known RBP	18.41	■□□□□ 0.54
CCNL1-222	ENST00000479596	BTBD19	C9JJ37	291 aa		18.41	■□□□□ 0.54
CCNL1-222	ENST00000479596	MAP4K4	O95819	1239 aa	Predicted RBP	18.41	■□□□□ 0.54
CCNL1-222	ENST00000479596	CETP	P11597	493 aa		18.41	■□□□□ 0.54
CCNL1-222	ENST00000479596	RGS19	P49795	217 aa		18.41	■□□□□ 0.54
CCNL1-222	ENST00000479596	MOGS	Q13724	837 aa		18.41	■□□□□ 0.54
CCNL1-222	ENST00000479596	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	18.41	■□□□□ 0.54
CCNL1-222	ENST00000479596	RHPN1	Q8TCX5	695 aa		18.41	■□□□□ 0.54
CCNL1-222	ENST00000479596	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	18.41	■□□□□ 0.54
CCNL1-222	ENST00000479596	IL1RAPL2	Q9NP60	686 aa		18.41	■□□□□ 0.54
CCNL1-222	ENST00000479596	NDUFB9	Q9Y6M9	179 aa		18.41	■□□□□ 0.54
CCNL1-222	ENST00000479596	PDE3A	Q14432	1141 aa		18.4	■□□□□ 0.54
CCNL1-222	ENST00000479596	TAF1C	Q15572	869 aa	Predicted RBP	18.4	■□□□□ 0.54
CCNL1-222	ENST00000479596	NAA16	Q6N069	864 aa	Predicted RBP	18.4	■□□□□ 0.54
CCNL1-222	ENST00000479596	AACS	Q86V21	672 aa		18.4	■□□□□ 0.54
CCNL1-222	ENST00000479596	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	18.4	■□□□□ 0.54
CCNL1-222	ENST00000479596	OSBPL5	Q9H0X9	879 aa	Predicted RBP	18.4	■□□□□ 0.54
CCNL1-222	ENST00000479596	PPP4C	P60510	307 aa		18.39	■□□□□ 0.53
CCNL1-222	ENST00000479596	HSP90AB4P	Q58FF6	505 aa		18.39	■□□□□ 0.53
CCNL1-222	ENST00000479596	FBXO46	Q6PJ61	603 aa	Predicted RBP	18.39	■□□□□ 0.53
CCNL1-222	ENST00000479596	OTOP1	Q7RTM1	612 aa		18.39	■□□□□ 0.53
CCNL1-222	ENST00000479596	TEX11	Q8IYF3	940 aa		18.39	■□□□□ 0.53
CCNL1-222	ENST00000479596	SCYL3	Q8IZE3	742 aa		18.39	■□□□□ 0.53
CCNL1-222	ENST00000479596	CD99L2	Q8TCZ2	262 aa		18.39	■□□□□ 0.53
CCNL1-222	ENST00000479596	ZCCHC17	Q9NP64	241 aa	Known RBP	18.39	■□□□□ 0.53
CCNL1-222	ENST00000479596	AATF	Q9NY61	560 aa	Known RBP eCLIP	18.39	■□□□□ 0.53
CCNL1-222	ENST00000479596	SIPA1L1	O43166	1804 aa		18.38	■□□□□ 0.53
CCNL1-222	ENST00000479596	FAM196B	A6NMK8	535 aa		18.38	■□□□□ 0.53
CCNL1-222	ENST00000479596	TBC1D12	O60347	775 aa		18.38	■□□□□ 0.53
CCNL1-222	ENST00000479596	IGSF3	O75054	1194 aa		18.38	■□□□□ 0.53
CCNL1-222	ENST00000479596	SP3	Q02447	781 aa		18.38	■□□□□ 0.53
CCNL1-222	ENST00000479596	ANTXR1	Q9H6X2	564 aa		18.38	■□□□□ 0.53
CCNL1-222	ENST00000479596	ZFYVE28	Q9HCC9	887 aa		18.38	■□□□□ 0.53
CCNL1-222	ENST00000479596	DOCK1	Q14185	1865 aa		18.37	■□□□□ 0.53
CCNL1-222	ENST00000479596	HMMR	O75330	724 aa		18.37	■□□□□ 0.53
CCNL1-222	ENST00000479596	PTPRA	P18433	802 aa		18.37	■□□□□ 0.53
CCNL1-222	ENST00000479596	KIF1BP	Q96EK5	621 aa		18.37	■□□□□ 0.53
CCNL1-222	ENST00000479596	ERO1A	Q96HE7	468 aa		18.37	■□□□□ 0.53
CCNL1-222	ENST00000479596	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	18.37	■□□□□ 0.53
CCNL1-222	ENST00000479596	TRIM17	Q9Y577	477 aa		18.37	■□□□□ 0.53
CCNL1-222	ENST00000479596	CDK5RAP2	Q96SN8	1893 aa		18.37	■□□□□ 0.53
CCNL1-222	ENST00000479596	TNRC18	O15417	2968 aa	Predicted RBP	18.36	■□□□□ 0.53
CCNL1-222	ENST00000479596	CENPF	P49454	3210 aa		18.36	■□□□□ 0.53
CCNL1-222	ENST00000479596	APBB1	O00213	710 aa		18.36	■□□□□ 0.53
CCNL1-222	ENST00000479596	CTNND1	O60716	968 aa	Known RBP	18.36	■□□□□ 0.53
CCNL1-222	ENST00000479596	BAG3	O95817	575 aa		18.36	■□□□□ 0.53
CCNL1-222	ENST00000479596	SOX10	P56693	466 aa		18.36	■□□□□ 0.53
CCNL1-222	ENST00000479596	FOCAD	Q5VW36	1801 aa		18.36	■□□□□ 0.53
CCNL1-222	ENST00000479596	ANKRD23	Q86SG2	305 aa		18.36	■□□□□ 0.53
CCNL1-222	ENST00000479596	PHIP	Q8WWQ0	1821 aa		18.36	■□□□□ 0.53
CCNL1-222	ENST00000479596	FLT1	P17948	1338 aa		18.35	■□□□□ 0.53
CCNL1-222	ENST00000479596	ADGRA2	Q96PE1	1338 aa		18.35	■□□□□ 0.53
CCNL1-222	ENST00000479596	CXCL11	O14625	94 aa		18.35	■□□□□ 0.53
CCNL1-222	ENST00000479596	TLR2	O60603	784 aa		18.35	■□□□□ 0.53
CCNL1-222	ENST00000479596	IDH1	O75874	414 aa	Known RBP	18.35	■□□□□ 0.53
CCNL1-222	ENST00000479596	DYNLL1	P63167	89 aa	Known RBP	18.35	■□□□□ 0.53
CCNL1-222	ENST00000479596	RRP1B	Q14684	758 aa	Known RBP	18.35	■□□□□ 0.53
CCNL1-222	ENST00000479596	GPAT2	Q6NUI2	795 aa		18.35	■□□□□ 0.53
CCNL1-222	ENST00000479596	TGFBRAP1	Q8WUH2	860 aa		18.35	■□□□□ 0.53
CCNL1-222	ENST00000479596	NOL10	Q9BSC4	688 aa	Known RBP	18.35	■□□□□ 0.53
CCNL1-222	ENST00000479596	CHMP4B	Q9H444	224 aa	Known RBP	18.35	■□□□□ 0.53
CCNL1-222	ENST00000479596	PICK1	Q9NRD5	415 aa		18.35	■□□□□ 0.53
CCNL1-222	ENST00000479596	AFG3L2	Q9Y4W6	797 aa		18.35	■□□□□ 0.53
CCNL1-222	ENST00000479596	ZHX2	Q9Y6X8	837 aa		18.35	■□□□□ 0.53
CCNL1-222	ENST00000479596		A0A0G2JLL6	359 aa	Predicted RBP	18.34	■□□□□ 0.53
CCNL1-222	ENST00000479596	PDHX	O00330	501 aa		18.34	■□□□□ 0.53
CCNL1-222	ENST00000479596	PLCG2	P16885	1265 aa		18.34	■□□□□ 0.53
CCNL1-222	ENST00000479596	CYP7A1	P22680	504 aa		18.34	■□□□□ 0.53
CCNL1-222	ENST00000479596	PRRT2	Q7Z6L0	340 aa	Predicted RBP	18.34	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms