RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 STAP2Q9UGK3 403 aa8.32□□□□□ -1.08
VCP-205ENST00000479300 UNC80Q8N2C7 3258 aa8.32□□□□□ -1.08
VCP-205ENST00000479300 UTYO14607 1347 aa8.31□□□□□ -1.08
VCP-205ENST00000479300 MROH5Q6ZUA9 1318 aa8.31□□□□□ -1.08
VCP-205ENST00000479300 PHIPQ8WWQ0 1821 aa8.31□□□□□ -1.08
VCP-205ENST00000479300 PTPRFP10586 1907 aa8.31□□□□□ -1.08
VCP-205ENST00000479300 PHF20L1A8MW92 1017 aa8.31□□□□□ -1.08
VCP-205ENST00000479300 WDHD1O75717 1129 aaPredicted RBP8.31□□□□□ -1.08
VCP-205ENST00000479300 INHAP05111 366 aa8.31□□□□□ -1.08
VCP-205ENST00000479300 FLT3LGP49771 235 aa8.31□□□□□ -1.08
VCP-205ENST00000479300 TCP10Q12799 353 aa8.31□□□□□ -1.08
VCP-205ENST00000479300 DIXDC1Q155Q3 683 aa8.31□□□□□ -1.08
VCP-205ENST00000479300 DCAF15Q66K64 600 aa8.31□□□□□ -1.08
VCP-205ENST00000479300 CDC42EP5Q6NZY7 148 aa8.31□□□□□ -1.08
VCP-205ENST00000479300 HHIPL2Q6UWX4 724 aa8.31□□□□□ -1.08
VCP-205ENST00000479300 TBC1D22AQ8WUA7 517 aa8.31□□□□□ -1.08
VCP-205ENST00000479300 FAM151AQ8WW52 585 aa8.31□□□□□ -1.08
VCP-205ENST00000479300 HTATIP2Q9BUP3 242 aa8.31□□□□□ -1.08
VCP-205ENST00000479300 PAK6Q9NQU5 681 aaPredicted RBP8.31□□□□□ -1.08
VCP-205ENST00000479300 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.31□□□□□ -1.08
VCP-205ENST00000479300 BIN2Q9UBW5 565 aaPredicted RBP8.31□□□□□ -1.08
VCP-205ENST00000479300 DAGLAQ9Y4D2 1042 aa8.31□□□□□ -1.08
VCP-205ENST00000479300 PTPRCP08575 1304 aa8.3□□□□□ -1.08
VCP-205ENST00000479300 A0A1W2PPC1 479 aa8.3□□□□□ -1.08
VCP-205ENST00000479300 ADCY3O60266 1144 aa8.3□□□□□ -1.08
VCP-205ENST00000479300 PDE8BO95263 885 aa8.3□□□□□ -1.08
VCP-205ENST00000479300 HOXD10P28358 340 aa8.3□□□□□ -1.08
VCP-205ENST00000479300 MNX1P50219 401 aaPredicted RBP8.3□□□□□ -1.08
VCP-205ENST00000479300 FCGRTP55899 365 aa8.3□□□□□ -1.08
VCP-205ENST00000479300 METTL24Q5JXM2 366 aa8.3□□□□□ -1.08
VCP-205ENST00000479300 Q7L0L9 218 aa8.3□□□□□ -1.08
VCP-205ENST00000479300 SH3BP5LQ7L8J4 393 aa8.3□□□□□ -1.08
VCP-205ENST00000479300 SLAIN1Q8ND83 568 aa8.3□□□□□ -1.08
VCP-205ENST00000479300 DEFB118Q96PH6 123 aa8.3□□□□□ -1.08
VCP-205ENST00000479300 GDF15Q99988 308 aa8.3□□□□□ -1.08
VCP-205ENST00000479300 CRISPLD2Q9H0B8 497 aa8.3□□□□□ -1.08
VCP-205ENST00000479300 TMOD2Q9NZR1 351 aa8.3□□□□□ -1.08
VCP-205ENST00000479300 NR2E3Q9Y5X4 410 aa8.3□□□□□ -1.08
VCP-205ENST00000479300 RFX7Q2KHR2 1363 aa8.3□□□□□ -1.08
VCP-205ENST00000479300 DOCK3Q8IZD9 2030 aa8.3□□□□□ -1.08
VCP-205ENST00000479300 DOCK2Q92608 1830 aa8.29□□□□□ -1.08
VCP-205ENST00000479300 MYH13Q9UKX3 1938 aa8.29□□□□□ -1.08
VCP-205ENST00000479300 A0A0G2JLL6 359 aaPredicted RBP8.29□□□□□ -1.08
VCP-205ENST00000479300 CCER2I3L3R5 266 aa8.29□□□□□ -1.08
VCP-205ENST00000479300 CXCL11O14625 94 aa8.29□□□□□ -1.08
VCP-205ENST00000479300 EVI5O60447 810 aa8.29□□□□□ -1.08
VCP-205ENST00000479300 PRDX5P30044 214 aa8.29□□□□□ -1.08
VCP-205ENST00000479300 RFX5P48382 616 aaPredicted RBP8.29□□□□□ -1.08
VCP-205ENST00000479300 UBXN2AP68543 259 aa8.29□□□□□ -1.08
VCP-205ENST00000479300 PRRT2Q7Z6L0 340 aaPredicted RBP8.29□□□□□ -1.08
VCP-205ENST00000479300 CCDC84Q86UT8 332 aaPredicted RBP8.29□□□□□ -1.08
VCP-205ENST00000479300 VPS37DQ86XT2 251 aa8.29□□□□□ -1.08
VCP-205ENST00000479300 HOOK2Q96ED9 719 aa8.29□□□□□ -1.08
VCP-205ENST00000479300 PAWRQ96IZ0 340 aaKnown RBP8.29□□□□□ -1.08
VCP-205ENST00000479300 PARK7Q99497 189 aaKnown RBP8.29□□□□□ -1.08
VCP-205ENST00000479300 HDAC5Q9UQL6 1122 aa8.29□□□□□ -1.08
VCP-205ENST00000479300 SUGT1Q9Y2Z0 365 aa8.29□□□□□ -1.08
VCP-205ENST00000479300 AFG3L2Q9Y4W6 797 aa8.29□□□□□ -1.08
VCP-205ENST00000479300 PLXNB2O15031 1838 aa8.29□□□□□ -1.08
VCP-205ENST00000479300 KIF16BQ96L93 1317 aa8.29□□□□□ -1.08
VCP-205ENST00000479300 FRAT2O75474 233 aaPredicted RBP8.28□□□□□ -1.08
VCP-205ENST00000479300 TFRCP02786 760 aaKnown RBP8.28□□□□□ -1.08
VCP-205ENST00000479300 PTPRAP18433 802 aa8.28□□□□□ -1.08
VCP-205ENST00000479300 DEKP35659 375 aaKnown RBP8.28□□□□□ -1.08
VCP-205ENST00000479300 SLFN5Q08AF3 891 aa8.28□□□□□ -1.08
VCP-205ENST00000479300 TRIM32Q13049 653 aa8.28□□□□□ -1.08
VCP-205ENST00000479300 IRF5Q13568 498 aa8.28□□□□□ -1.08
VCP-205ENST00000479300 ALDH1L2Q3SY69 923 aa8.28□□□□□ -1.08
VCP-205ENST00000479300 CAVIN4Q5BKX8 364 aa8.28□□□□□ -1.08
VCP-205ENST00000479300 MRPL50Q8N5N7 158 aaKnown RBP8.28□□□□□ -1.08
VCP-205ENST00000479300 PXYLP1Q8TE99 480 aa8.28□□□□□ -1.08
VCP-205ENST00000479300 SMC4Q9NTJ3 1288 aa8.28□□□□□ -1.08
VCP-205ENST00000479300 ZMYND8Q9ULU4 1186 aaPredicted RBP8.28□□□□□ -1.08
VCP-205ENST00000479300 ZHX2Q9Y6X8 837 aa8.28□□□□□ -1.08
VCP-205ENST00000479300 LAMA2P24043 3122 aaKnown RBP8.28□□□□□ -1.08
VCP-205ENST00000479300 DOCK1Q14185 1865 aa8.28□□□□□ -1.08
VCP-205ENST00000479300 MAST3O60307 1309 aa8.28□□□□□ -1.08
VCP-205ENST00000479300 AK9Q5TCS8 1911 aa8.27□□□□□ -1.09
VCP-205ENST00000479300 DDX60LQ5H9U9 1706 aaKnown RBP8.27□□□□□ -1.09
VCP-205ENST00000479300 DDTLA6NHG4 134 aaPredicted RBP8.27□□□□□ -1.09
VCP-205ENST00000479300 CT47B1P0C2W7 299 aaPredicted RBP8.27□□□□□ -1.09
VCP-205ENST00000479300 BMP8BP34820 402 aa8.27□□□□□ -1.09
VCP-205ENST00000479300 MAP3K10Q02779 954 aa8.27□□□□□ -1.09
VCP-205ENST00000479300 PUM3Q15397 648 aaKnown RBP8.27□□□□□ -1.09
VCP-205ENST00000479300 TREML2Q5T2D2 321 aa8.27□□□□□ -1.09
VCP-205ENST00000479300 GADL1Q6ZQY3 521 aa8.27□□□□□ -1.09
VCP-205ENST00000479300 ATG9AQ7Z3C6 839 aa8.27□□□□□ -1.09
VCP-205ENST00000479300 C7orf61Q8IZ16 206 aa8.27□□□□□ -1.09
VCP-205ENST00000479300 SCYL3Q8IZE3 742 aa8.27□□□□□ -1.09
VCP-205ENST00000479300 BBXQ8WY36 941 aaPredicted RBP8.27□□□□□ -1.09
VCP-205ENST00000479300 DDX4Q9NQI0 724 aaKnown RBP8.27□□□□□ -1.09
VCP-205ENST00000479300 USP40Q9NVE5 1235 aa8.27□□□□□ -1.09
VCP-205ENST00000479300 ZNF521Q96K83 1311 aa8.27□□□□□ -1.09
VCP-205ENST00000479300 SPTBN5Q9NRC6 3674 aaKnown RBP8.26□□□□□ -1.09
VCP-205ENST00000479300 LOC285556D6RIA3 1793 aa8.26□□□□□ -1.09
VCP-205ENST00000479300 TNPO2O14787 897 aaKnown RBP8.26□□□□□ -1.09
VCP-205ENST00000479300 SYN1P17600 705 aa8.26□□□□□ -1.09
VCP-205ENST00000479300 MAGEA10P43363 369 aaPredicted RBP8.26□□□□□ -1.09
VCP-205ENST00000479300 RGS3P49796 1198 aa8.26□□□□□ -1.09
VCP-205ENST00000479300 DEFB123Q8N688 67 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms