RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 NUCB1Q02818 461 aa18.75■□□□□ 0.59
C9orf3-217ENST00000479161 UBE3CQ15386 1083 aa18.75■□□□□ 0.59
C9orf3-217ENST00000479161 MOB2Q70IA6 237 aa18.75■□□□□ 0.59
C9orf3-217ENST00000479161 RASAL3Q86YV0 1011 aa18.75■□□□□ 0.59
C9orf3-217ENST00000479161 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.75■□□□□ 0.59
C9orf3-217ENST00000479161 PI4K2BQ8TCG2 481 aa18.75■□□□□ 0.59
C9orf3-217ENST00000479161 DHX36Q9H2U1 1008 aaKnown RBP18.75■□□□□ 0.59
C9orf3-217ENST00000479161 WBP1LQ9NX94 342 aa18.75■□□□□ 0.59
C9orf3-217ENST00000479161 AATFQ9NY61 560 aaKnown RBP eCLIP18.75■□□□□ 0.59
C9orf3-217ENST00000479161 ZBTB48P10074 688 aaPredicted RBP18.74■□□□□ 0.59
C9orf3-217ENST00000479161 ADD2P35612 726 aa18.74■□□□□ 0.59
C9orf3-217ENST00000479161 MAP3K9P80192 1104 aa18.74■□□□□ 0.59
C9orf3-217ENST00000479161 TCP10Q12799 353 aa18.74■□□□□ 0.59
C9orf3-217ENST00000479161 PAXIP1Q6ZW49 1069 aaPredicted RBP18.74■□□□□ 0.59
C9orf3-217ENST00000479161 CDAN1Q8IWY9 1227 aa18.74■□□□□ 0.59
C9orf3-217ENST00000479161 TEX11Q8IYF3 940 aa18.74■□□□□ 0.59
C9orf3-217ENST00000479161 KBTBD3Q8NAB2 608 aa18.74■□□□□ 0.59
C9orf3-217ENST00000479161 ZNF341Q9BYN7 854 aa18.74■□□□□ 0.59
C9orf3-217ENST00000479161 DDX4Q9NQI0 724 aaKnown RBP18.74■□□□□ 0.59
C9orf3-217ENST00000479161 OTOFQ9HC10 1997 aa18.73■□□□□ 0.59
C9orf3-217ENST00000479161 CA12O43570 354 aa18.73■□□□□ 0.59
C9orf3-217ENST00000479161 LRRFIP1Q32MZ4 808 aaKnown RBP18.73■□□□□ 0.59
C9orf3-217ENST00000479161 METTL16Q86W50 562 aaKnown RBP18.73■□□□□ 0.59
C9orf3-217ENST00000479161 CHD1LQ86WJ1 897 aa18.73■□□□□ 0.59
C9orf3-217ENST00000479161 SH3RF3Q8TEJ3 882 aaPredicted RBP18.73■□□□□ 0.59
C9orf3-217ENST00000479161 SLC10A4Q96EP9 437 aa18.73■□□□□ 0.59
C9orf3-217ENST00000479161 RIOK1Q9BRS2 568 aaKnown RBP18.73■□□□□ 0.59
C9orf3-217ENST00000479161 OSBPL5Q9H0X9 879 aaPredicted RBP18.73■□□□□ 0.59
C9orf3-217ENST00000479161 TAOK2Q9UL54 1235 aa18.73■□□□□ 0.59
C9orf3-217ENST00000479161 ZFYP08048 801 aaPredicted RBP18.72■□□□□ 0.59
C9orf3-217ENST00000479161 INHBEP58166 350 aa18.72■□□□□ 0.59
C9orf3-217ENST00000479161 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.72■□□□□ 0.59
C9orf3-217ENST00000479161 SH3BP5LQ7L8J4 393 aa18.72■□□□□ 0.59
C9orf3-217ENST00000479161 ZFPM1Q8IX07 1006 aa18.72■□□□□ 0.59
C9orf3-217ENST00000479161 CSRNP1Q96S65 589 aa18.72■□□□□ 0.59
C9orf3-217ENST00000479161 OSBPL3Q9H4L5 887 aa18.72■□□□□ 0.59
C9orf3-217ENST00000479161 ZNF532Q9HCE3 1301 aa18.72■□□□□ 0.59
C9orf3-217ENST00000479161 PDE1AP54750 535 aa18.71■□□□□ 0.59
C9orf3-217ENST00000479161 SPRYD7Q5W111 196 aa18.71■□□□□ 0.59
C9orf3-217ENST00000479161 EDC3Q96F86 508 aaKnown RBP18.71■□□□□ 0.59
C9orf3-217ENST00000479161 PI4KBQ9UBF8 816 aa18.71■□□□□ 0.59
C9orf3-217ENST00000479161 MYH1P12882 1939 aa18.7■□□□□ 0.58
C9orf3-217ENST00000479161 MAGEB6P1A0A0J9YX57 407 aa18.7■□□□□ 0.58
C9orf3-217ENST00000479161 DDTLA6NHG4 134 aaPredicted RBP18.7■□□□□ 0.58
C9orf3-217ENST00000479161 TM4SF4P48230 202 aa18.7■□□□□ 0.58
C9orf3-217ENST00000479161 PRKG1Q13976 671 aa18.7■□□□□ 0.58
C9orf3-217ENST00000479161 NOL9Q5SY16 702 aaKnown RBP18.7■□□□□ 0.58
C9orf3-217ENST00000479161 FOXP4Q8IVH2 680 aaPredicted RBP18.7■□□□□ 0.58
C9orf3-217ENST00000479161 OTUD7AQ8TE49 926 aaPredicted RBP18.7■□□□□ 0.58
C9orf3-217ENST00000479161 HERC5Q9UII4 1024 aaKnown RBP18.7■□□□□ 0.58
C9orf3-217ENST00000479161 CSADQ9Y600 493 aa18.7■□□□□ 0.58
C9orf3-217ENST00000479161 FLT1P17948 1338 aa18.7■□□□□ 0.58
C9orf3-217ENST00000479161 AOC2O75106 756 aa18.69■□□□□ 0.58
C9orf3-217ENST00000479161 KIF23Q02241 960 aaPredicted RBP18.69■□□□□ 0.58
C9orf3-217ENST00000479161 PICALMQ13492 652 aa18.69■□□□□ 0.58
C9orf3-217ENST00000479161 ZSCAN29Q8IWY8 852 aaPredicted RBP18.69■□□□□ 0.58
C9orf3-217ENST00000479161 TGFBRAP1Q8WUH2 860 aa18.69■□□□□ 0.58
C9orf3-217ENST00000479161 WRNIP1Q96S55 665 aa18.69■□□□□ 0.58
C9orf3-217ENST00000479161 BCL11AQ9H165 835 aa18.69■□□□□ 0.58
C9orf3-217ENST00000479161 MANSC4A6NHS7 340 aaPredicted RBP18.68■□□□□ 0.58
C9orf3-217ENST00000479161 PHF20L1A8MW92 1017 aa18.68■□□□□ 0.58
C9orf3-217ENST00000479161 HSPA1AP0DMV8 641 aaKnown RBP18.68■□□□□ 0.58
C9orf3-217ENST00000479161 HSPA1BP0DMV9 641 aaKnown RBP18.68■□□□□ 0.58
C9orf3-217ENST00000479161 DYNLL1P63167 89 aaKnown RBP18.68■□□□□ 0.58
C9orf3-217ENST00000479161 VGLL4Q14135 290 aa18.68■□□□□ 0.58
C9orf3-217ENST00000479161 COL13A1Q5TAT6 717 aaPredicted RBP18.68■□□□□ 0.58
C9orf3-217ENST00000479161 ERO1BQ86YB8 467 aa18.68■□□□□ 0.58
C9orf3-217ENST00000479161 MIGA1Q8NAN2 632 aa18.68■□□□□ 0.58
C9orf3-217ENST00000479161 WNK4Q96J92 1243 aa18.68■□□□□ 0.58
C9orf3-217ENST00000479161 CLMNQ96JQ2 1002 aa18.68■□□□□ 0.58
C9orf3-217ENST00000479161 CRNKL1Q9BZJ0 848 aaKnown RBP18.68■□□□□ 0.58
C9orf3-217ENST00000479161 LNPKQ9C0E8 428 aa18.68■□□□□ 0.58
C9orf3-217ENST00000479161 SAGE1Q9NXZ1 904 aa18.68■□□□□ 0.58
C9orf3-217ENST00000479161 FZD1Q9UP38 647 aa18.68■□□□□ 0.58
C9orf3-217ENST00000479161 SPDYE5A6NIY4 337 aa18.67■□□□□ 0.58
C9orf3-217ENST00000479161 CTNND1O60716 968 aaKnown RBP18.67■□□□□ 0.58
C9orf3-217ENST00000479161 IRX6P78412 446 aaPredicted RBP18.67■□□□□ 0.58
C9orf3-217ENST00000479161 SREBF2Q12772 1141 aa18.67■□□□□ 0.58
C9orf3-217ENST00000479161 MIGA2Q7L4E1 593 aa18.67■□□□□ 0.58
C9orf3-217ENST00000479161 EVI5LQ96CN4 794 aa18.67■□□□□ 0.58
C9orf3-217ENST00000479161 BEGAINQ9BUH8 593 aa18.67■□□□□ 0.58
C9orf3-217ENST00000479161 ATP8A2Q9NTI2 1148 aa18.67■□□□□ 0.58
C9orf3-217ENST00000479161 GINM1Q9NU53 330 aa18.67■□□□□ 0.58
C9orf3-217ENST00000479161 TESPA1A2RU30 521 aaPredicted RBP18.66■□□□□ 0.58
C9orf3-217ENST00000479161 RNF113AO15541 343 aaKnown RBP18.66■□□□□ 0.58
C9orf3-217ENST00000479161 PPATQ06203 517 aa18.66■□□□□ 0.58
C9orf3-217ENST00000479161 GRM1Q13255 1194 aa18.66■□□□□ 0.58
C9orf3-217ENST00000479161 TSHZ3Q63HK5 1081 aa18.66■□□□□ 0.58
C9orf3-217ENST00000479161 PLEKHM2Q8IWE5 1019 aa18.66■□□□□ 0.58
C9orf3-217ENST00000479161 APPBP2Q92624 585 aa18.66■□□□□ 0.58
C9orf3-217ENST00000479161 AIDAQ96BJ3 306 aa18.66■□□□□ 0.58
C9orf3-217ENST00000479161 EHD4Q9H223 541 aa18.66■□□□□ 0.58
C9orf3-217ENST00000479161 SNCAIPQ9Y6H5 919 aa18.66■□□□□ 0.58
C9orf3-217ENST00000479161 DDX60LQ5H9U9 1706 aaKnown RBP18.66■□□□□ 0.58
C9orf3-217ENST00000479161 SIPA1L1O43166 1804 aa18.65■□□□□ 0.58
C9orf3-217ENST00000479161 USP5P45974 858 aa18.65■□□□□ 0.58
C9orf3-217ENST00000479161 B4GALNT3Q6L9W6 998 aa18.65■□□□□ 0.58
C9orf3-217ENST00000479161 TTC6Q86TZ1 520 aa18.65■□□□□ 0.58
C9orf3-217ENST00000479161 MAPKAPK5Q8IW41 473 aa18.65■□□□□ 0.58
C9orf3-217ENST00000479161 ZIC5Q96T25 663 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms