RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, human

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKB-208	ENST00000479003	PDE6B	P35913	854 aa		32.05	■■■□□ 2.72
CHKB-208	ENST00000479003	ZNF165	P49910	485 aa		32.05	■■■□□ 2.72
CHKB-208	ENST00000479003	GOLPH3L	Q9H4A5	285 aa		32.05	■■■□□ 2.72
CHKB-208	ENST00000479003	DNAJC25	Q9H1X3	360 aa		32.04	■■■□□ 2.72
CHKB-208	ENST00000479003	SNW1	Q13573	536 aa	Known RBP	32.03	■■■□□ 2.72
CHKB-208	ENST00000479003	UBE3C	Q15386	1083 aa		32.03	■■■□□ 2.72
CHKB-208	ENST00000479003	SPC24	Q8NBT2	197 aa		32.03	■■■□□ 2.72
CHKB-208	ENST00000479003	LEMD3	Q9Y2U8	911 aa		32.03	■■■□□ 2.72
CHKB-208	ENST00000479003	GOLGA8B	A8MQT2	603 aa		32.03	■■■□□ 2.72
CHKB-208	ENST00000479003	PDE6A	P16499	860 aa		32.03	■■■□□ 2.72
CHKB-208	ENST00000479003	CCDC73	Q6ZRK6	1079 aa		32.03	■■■□□ 2.72
CHKB-208	ENST00000479003	ENGASE	Q8NFI3	743 aa		32.03	■■■□□ 2.72
CHKB-208	ENST00000479003	NPR1	P16066	1061 aa		32.02	■■■□□ 2.72
CHKB-208	ENST00000479003	HIBADH	P31937	336 aa	Known RBP	32.02	■■■□□ 2.72
CHKB-208	ENST00000479003	GPR101	Q96P66	508 aa	Predicted RBP	32.02	■■■□□ 2.72
CHKB-208	ENST00000479003	RTEL1	Q9NZ71	1219 aa		32.02	■■■□□ 2.72
CHKB-208	ENST00000479003	GOLGB1	Q14789	3259 aa	Known RBP	32.02	■■■□□ 2.72
CHKB-208	ENST00000479003	LRRC37A	A6NMS7	1700 aa		32.02	■■■□□ 2.72
CHKB-208	ENST00000479003	PLA2G4D	Q86XP0	818 aa		32.02	■■■□□ 2.72
CHKB-208	ENST00000479003	ZNF532	Q9HCE3	1301 aa		32.01	■■■□□ 2.72
CHKB-208	ENST00000479003	PPEF1	O14829	653 aa	Predicted RBP	32.01	■■■□□ 2.71
CHKB-208	ENST00000479003	KIAA1524	Q8TCG1	905 aa		32.01	■■■□□ 2.71
CHKB-208	ENST00000479003	NBPF3	Q9H094	633 aa		32.01	■■■□□ 2.71
CHKB-208	ENST00000479003	TCRBV5S4A2T	A0A5A2	114 aa		32	■■■□□ 2.71
CHKB-208	ENST00000479003	FAM160A1	Q05DH4	1040 aa		32	■■■□□ 2.71
CHKB-208	ENST00000479003	C8orf76	Q96K31	380 aa		32	■■■□□ 2.71
CHKB-208	ENST00000479003	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	32	■■■□□ 2.71
CHKB-208	ENST00000479003	CCDC125	Q86Z20	511 aa		32	■■■□□ 2.71
CHKB-208	ENST00000479003	MYH13	Q9UKX3	1938 aa		31.99	■■■□□ 2.71
CHKB-208	ENST00000479003	ZNF75D	P51815	510 aa		31.99	■■■□□ 2.71
CHKB-208	ENST00000479003	MAP3K12	Q12852	859 aa		31.99	■■■□□ 2.71
CHKB-208	ENST00000479003	DNTTIP2	Q5QJE6	756 aa	Known RBP	31.99	■■■□□ 2.71
CHKB-208	ENST00000479003	C17orf53	Q8N3J3	647 aa	Predicted RBP	31.99	■■■□□ 2.71
CHKB-208	ENST00000479003	FBXO18	Q8NFZ0	1043 aa		31.99	■■■□□ 2.71
CHKB-208	ENST00000479003	ORC3	Q9UBD5	711 aa	Predicted RBP	31.99	■■■□□ 2.71
CHKB-208	ENST00000479003	DENND2A	Q9ULE3	1009 aa		31.99	■■■□□ 2.71
CHKB-208	ENST00000479003	ME1	P48163	572 aa		31.99	■■■□□ 2.71
CHKB-208	ENST00000479003	MAGEB6	Q8N7X4	407 aa		31.99	■■■□□ 2.71
CHKB-208	ENST00000479003	RGS22	Q8NE09	1264 aa		31.99	■■■□□ 2.71
CHKB-208	ENST00000479003	UFL1	O94874	794 aa		31.98	■■■□□ 2.71
CHKB-208	ENST00000479003	MASTL	Q96GX5	879 aa		31.98	■■■□□ 2.71
CHKB-208	ENST00000479003	LTBP1	Q14766	1721 aa		31.98	■■■□□ 2.71
CHKB-208	ENST00000479003	KIN	O60870	393 aa	Known RBP	31.97	■■■□□ 2.71
CHKB-208	ENST00000479003	TRDN	Q13061	729 aa		31.97	■■■□□ 2.71
CHKB-208	ENST00000479003	STX1A	Q16623	288 aa		31.97	■■■□□ 2.71
CHKB-208	ENST00000479003	FSIP1	Q8NA03	581 aa		31.97	■■■□□ 2.71
CHKB-208	ENST00000479003	ABCF2	Q9UG63	623 aa		31.97	■■■□□ 2.71
CHKB-208	ENST00000479003	PYCARD	Q9ULZ3	195 aa		31.97	■■■□□ 2.71
CHKB-208	ENST00000479003	DYNC1I1	O14576	645 aa		31.97	■■■□□ 2.71
CHKB-208	ENST00000479003	IQCB1	Q15051	598 aa		31.97	■■■□□ 2.71
CHKB-208	ENST00000479003	LRP2BP	Q9P2M1	347 aa		31.97	■■■□□ 2.71
CHKB-208	ENST00000479003	PCDHA7	Q9UN72	937 aa		31.97	■■■□□ 2.71
CHKB-208	ENST00000479003	CPLX1	O14810	134 aa		31.96	■■■□□ 2.71
CHKB-208	ENST00000479003	ADAL	Q6DHV7	355 aa		31.96	■■■□□ 2.71
CHKB-208	ENST00000479003	OLFM4	Q6UX06	510 aa		31.96	■■■□□ 2.71
CHKB-208	ENST00000479003	TRIM5	Q9C035	493 aa		31.96	■■■□□ 2.71
CHKB-208	ENST00000479003	PODXL2	Q9NZ53	605 aa		31.96	■■■□□ 2.71
CHKB-208	ENST00000479003	GGA1	Q9UJY5	639 aa		31.96	■■■□□ 2.71
CHKB-208	ENST00000479003		A0A1W2PQ27	194 aa		31.96	■■■□□ 2.71
CHKB-208	ENST00000479003		A0A1W2PQ64	194 aa		31.96	■■■□□ 2.71
CHKB-208	ENST00000479003		A0A1W2PQD8	194 aa		31.96	■■■□□ 2.71
CHKB-208	ENST00000479003	SEMA3E	O15041	775 aa		31.96	■■■□□ 2.71
CHKB-208	ENST00000479003	OTUD7B	Q6GQQ9	843 aa		31.96	■■■□□ 2.71
CHKB-208	ENST00000479003	TMC4	Q7Z404	712 aa		31.96	■■■□□ 2.71
CHKB-208	ENST00000479003	BRAP	Q7Z569	592 aa		31.96	■■■□□ 2.71
CHKB-208	ENST00000479003	TBC1D10C	Q8IV04	446 aa		31.96	■■■□□ 2.71
CHKB-208	ENST00000479003	SP8	Q8IXZ3	490 aa		31.96	■■■□□ 2.71
CHKB-208	ENST00000479003	POLL	Q9UGP5	575 aa		31.96	■■■□□ 2.71
CHKB-208	ENST00000479003	ATP6V0A2	Q9Y487	856 aa		31.96	■■■□□ 2.71
CHKB-208	ENST00000479003	CACNA1S	Q13698	1873 aa		31.95	■■■□□ 2.71
CHKB-208	ENST00000479003	C2CD5	Q86YS7	1000 aa		31.95	■■■□□ 2.71
CHKB-208	ENST00000479003	LINC00301	Q8NCQ3	95 aa		31.95	■■■□□ 2.71
CHKB-208	ENST00000479003	MRPS27	Q92552	414 aa	Known RBP	31.95	■■■□□ 2.71
CHKB-208	ENST00000479003	PRIMPOL	Q96LW4	560 aa		31.95	■■■□□ 2.71
CHKB-208	ENST00000479003	ATP2B4	P23634	1241 aa		31.94	■■■□□ 2.7
CHKB-208	ENST00000479003	ALDH1B1	P30837	517 aa		31.94	■■■□□ 2.7
CHKB-208	ENST00000479003	ZNF622	Q969S3	477 aa	Known RBP eCLIP	31.94	■■■□□ 2.7
CHKB-208	ENST00000479003	POLR3E	Q9NVU0	708 aa		31.94	■■■□□ 2.7
CHKB-208	ENST00000479003	ANGEL1	Q9UNK9	670 aa	Known RBP	31.94	■■■□□ 2.7
CHKB-208	ENST00000479003	PTGS1	P23219	599 aa		31.94	■■■□□ 2.7
CHKB-208	ENST00000479003	C11orf57	Q6ZUT1	292 aa	Predicted RBP	31.94	■■■□□ 2.7
CHKB-208	ENST00000479003	YEATS4	O95619	227 aa		31.93	■■■□□ 2.7
CHKB-208	ENST00000479003	C15orf52	Q6ZUT6	534 aa	Known RBP	31.93	■■■□□ 2.7
CHKB-208	ENST00000479003	TBC1D16	Q8TBP0	767 aa		31.93	■■■□□ 2.7
CHKB-208	ENST00000479003	ZMYM6	O95789	1325 aa		31.93	■■■□□ 2.7
CHKB-208	ENST00000479003	CYB5R4	Q7L1T6	521 aa		31.93	■■■□□ 2.7
CHKB-208	ENST00000479003	RAB11FIP4	Q86YS3	637 aa		31.93	■■■□□ 2.7
CHKB-208	ENST00000479003	FMR1NB	Q8N0W7	255 aa	Predicted RBP	31.93	■■■□□ 2.7
CHKB-208	ENST00000479003	JAG2	Q9Y219	1238 aa		31.93	■■■□□ 2.7
CHKB-208	ENST00000479003	SH2B2	O14492	632 aa	Predicted RBP	31.92	■■■□□ 2.7
CHKB-208	ENST00000479003	CHRNA5	P30532	468 aa		31.92	■■■□□ 2.7
CHKB-208	ENST00000479003	CHAF1A	Q13111	956 aa	Predicted RBP	31.92	■■■□□ 2.7
CHKB-208	ENST00000479003	ALX1	Q15699	326 aa		31.92	■■■□□ 2.7
CHKB-208	ENST00000479003	MYSM1	Q5VVJ2	828 aa		31.92	■■■□□ 2.7
CHKB-208	ENST00000479003	SARM1	Q6SZW1	724 aa		31.92	■■■□□ 2.7
CHKB-208	ENST00000479003	MYRIP	Q8NFW9	859 aa		31.92	■■■□□ 2.7
CHKB-208	ENST00000479003	KCNG4	Q8TDN1	519 aa		31.92	■■■□□ 2.7
CHKB-208	ENST00000479003	PDS5A	Q29RF7	1337 aa	Known RBP	31.92	■■■□□ 2.7
CHKB-208	ENST00000479003	CDC25B	P30305	580 aa		31.91	■■■□□ 2.7
CHKB-208	ENST00000479003	STRBP	Q96SI9	672 aa	Known RBP	31.91	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms