RNA–Protein interactions for RNA: ENST00000478914.1

XRCC6-208, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2

Gene XRCC6, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-208ENST00000478914 TNNI3KQ59H18 835 aa10.73□□□□□ -0.69
XRCC6-208ENST00000478914 OTOP1Q7RTM1 612 aa10.73□□□□□ -0.69
XRCC6-208ENST00000478914 CD99L2Q8TCZ2 262 aa10.73□□□□□ -0.69
XRCC6-208ENST00000478914 ZCCHC17Q9NP64 241 aaKnown RBP10.73□□□□□ -0.69
XRCC6-208ENST00000478914 GPR108Q9NPR9 543 aa10.73□□□□□ -0.69
XRCC6-208ENST00000478914 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.73□□□□□ -0.69
XRCC6-208ENST00000478914 FPGT-TNNI3KV9GXZ4 949 aa10.73□□□□□ -0.69
XRCC6-208ENST00000478914 PTPRFP10586 1907 aa10.73□□□□□ -0.69
XRCC6-208ENST00000478914 ZBTB7BO15156 539 aaPredicted RBP10.72□□□□□ -0.69
XRCC6-208ENST00000478914 MAP4K4O95819 1239 aaPredicted RBP10.72□□□□□ -0.69
XRCC6-208ENST00000478914 RLBP1P12271 317 aa10.72□□□□□ -0.69
XRCC6-208ENST00000478914 MCAMP43121 646 aa10.72□□□□□ -0.69
XRCC6-208ENST00000478914 KIF22Q14807 665 aa10.72□□□□□ -0.69
XRCC6-208ENST00000478914 NOL9Q5SY16 702 aaKnown RBP10.72□□□□□ -0.69
XRCC6-208ENST00000478914 PI16Q6UXB8 463 aa10.72□□□□□ -0.69
XRCC6-208ENST00000478914 FAM43AQ8N2R8 423 aa10.72□□□□□ -0.69
XRCC6-208ENST00000478914 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.72□□□□□ -0.69
XRCC6-208ENST00000478914 EFCC1Q9HA90 598 aa10.72□□□□□ -0.69
XRCC6-208ENST00000478914 PICK1Q9NRD5 415 aa10.72□□□□□ -0.69
XRCC6-208ENST00000478914 ZNF112Q9UJU3 913 aa10.72□□□□□ -0.69
XRCC6-208ENST00000478914 PHIPQ8WWQ0 1821 aa10.72□□□□□ -0.69
XRCC6-208ENST00000478914 MGAMO43451 1857 aa10.72□□□□□ -0.69
XRCC6-208ENST00000478914 GPR75-ASB3A0A0A6YYF3 556 aa10.71□□□□□ -0.69
XRCC6-208ENST00000478914 BTBD19C9JJ37 291 aa10.71□□□□□ -0.69
XRCC6-208ENST00000478914 MYH1P12882 1939 aa10.71□□□□□ -0.69
XRCC6-208ENST00000478914 RFX7Q2KHR2 1363 aa10.71□□□□□ -0.69
XRCC6-208ENST00000478914 TBC1D9Q6ZT07 1266 aa10.71□□□□□ -0.69
XRCC6-208ENST00000478914 RBBP6Q7Z6E9 1792 aaKnown RBP10.71□□□□□ -0.69
XRCC6-208ENST00000478914 ZFPM1Q8IX07 1006 aa10.71□□□□□ -0.69
XRCC6-208ENST00000478914 NSUN4Q96CB9 384 aaKnown RBP10.71□□□□□ -0.69
XRCC6-208ENST00000478914 DBNDD2Q9BQY9 259 aa10.71□□□□□ -0.69
XRCC6-208ENST00000478914 ZSWIM8A7E2V4 1837 aa10.7□□□□□ -0.7
XRCC6-208ENST00000478914 TLR2O60603 784 aa10.7□□□□□ -0.7
XRCC6-208ENST00000478914 BAG3O95817 575 aa10.7□□□□□ -0.7
XRCC6-208ENST00000478914 NAA16Q6N069 864 aaPredicted RBP10.7□□□□□ -0.7
XRCC6-208ENST00000478914 ERC1Q8IUD2 1116 aa10.7□□□□□ -0.7
XRCC6-208ENST00000478914 SCYL3Q8IZE3 742 aa10.7□□□□□ -0.7
XRCC6-208ENST00000478914 PANK1Q8TE04 598 aa10.7□□□□□ -0.7
XRCC6-208ENST00000478914 DDX4Q9NQI0 724 aaKnown RBP10.7□□□□□ -0.7
XRCC6-208ENST00000478914 SNRKQ9NRH2 765 aa10.7□□□□□ -0.7
XRCC6-208ENST00000478914 PCDH10Q9P2E7 1040 aa10.7□□□□□ -0.7
XRCC6-208ENST00000478914 PTPN22Q9Y2R2 807 aa10.7□□□□□ -0.7
XRCC6-208ENST00000478914 NOP58Q9Y2X3 529 aaKnown RBP10.7□□□□□ -0.7
XRCC6-208ENST00000478914 TNRC18O15417 2968 aaPredicted RBP10.69□□□□□ -0.7
XRCC6-208ENST00000478914 DDTLA6NHG4 134 aaPredicted RBP10.69□□□□□ -0.7
XRCC6-208ENST00000478914 PDHXO00330 501 aa10.69□□□□□ -0.7
XRCC6-208ENST00000478914 NPM3O75607 178 aaKnown RBP10.69□□□□□ -0.7
XRCC6-208ENST00000478914 PLCG2P16885 1265 aa10.69□□□□□ -0.7
XRCC6-208ENST00000478914 RHBDL3P58872 404 aa10.69□□□□□ -0.7
XRCC6-208ENST00000478914 HSP90AB4PQ58FF6 505 aa10.69□□□□□ -0.7
XRCC6-208ENST00000478914 CEP85Q6P2H3 762 aa10.69□□□□□ -0.7
XRCC6-208ENST00000478914 ANKRD23Q86SG2 305 aa10.69□□□□□ -0.7
XRCC6-208ENST00000478914 TEX11Q8IYF3 940 aa10.69□□□□□ -0.7
XRCC6-208ENST00000478914 CHMP4BQ9H444 224 aaKnown RBP10.69□□□□□ -0.7
XRCC6-208ENST00000478914 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.69□□□□□ -0.7
XRCC6-208ENST00000478914 KCNH4Q9UQ05 1017 aa10.69□□□□□ -0.7
XRCC6-208ENST00000478914 COL2A1P02458 1487 aaPredicted RBP10.68□□□□□ -0.7
XRCC6-208ENST00000478914 ATRNL1Q5VV63 1379 aa10.68□□□□□ -0.7
XRCC6-208ENST00000478914 PHF20L1A8MW92 1017 aa10.68□□□□□ -0.7
XRCC6-208ENST00000478914 CXCL11O14625 94 aa10.68□□□□□ -0.7
XRCC6-208ENST00000478914 CTNND1O60716 968 aaKnown RBP10.68□□□□□ -0.7
XRCC6-208ENST00000478914 IGSF3O75054 1194 aa10.68□□□□□ -0.7
XRCC6-208ENST00000478914 HMMRO75330 724 aa10.68□□□□□ -0.7
XRCC6-208ENST00000478914 PTPRAP18433 802 aa10.68□□□□□ -0.7
XRCC6-208ENST00000478914 SH3BP5LQ7L8J4 393 aa10.68□□□□□ -0.7
XRCC6-208ENST00000478914 FASTKD5Q7L8L6 764 aaKnown RBP10.68□□□□□ -0.7
XRCC6-208ENST00000478914 NBPF11Q86T75 865 aa10.68□□□□□ -0.7
XRCC6-208ENST00000478914 ZNF384Q8TF68 577 aa10.68□□□□□ -0.7
XRCC6-208ENST00000478914 ZNF512BQ96KM6 892 aaPredicted RBP10.68□□□□□ -0.7
XRCC6-208ENST00000478914 CCDC8Q9H0W5 538 aaPredicted RBP10.68□□□□□ -0.7
XRCC6-208ENST00000478914 DDX19BQ9UMR2 479 aa10.68□□□□□ -0.7
XRCC6-208ENST00000478914 ZHX2Q9Y6X8 837 aa10.68□□□□□ -0.7
XRCC6-208ENST00000478914 TBC1D12O60347 775 aa10.67□□□□□ -0.7
XRCC6-208ENST00000478914 GNRH1P01148 92 aa10.67□□□□□ -0.7
XRCC6-208ENST00000478914 CYP2E1P05181 493 aaPredicted RBP10.67□□□□□ -0.7
XRCC6-208ENST00000478914 ZAP70P43403 619 aa10.67□□□□□ -0.7
XRCC6-208ENST00000478914 LACTBP83111 547 aaPredicted RBP10.67□□□□□ -0.7
XRCC6-208ENST00000478914 MAP3K10Q02779 954 aa10.67□□□□□ -0.7
XRCC6-208ENST00000478914 SLC9C1Q4G0N8 1177 aa10.67□□□□□ -0.7
XRCC6-208ENST00000478914 GADL1Q6ZQY3 521 aa10.67□□□□□ -0.7
XRCC6-208ENST00000478914 SH3RF3Q8TEJ3 882 aaPredicted RBP10.67□□□□□ -0.7
XRCC6-208ENST00000478914 PARK7Q99497 189 aaKnown RBP10.67□□□□□ -0.7
XRCC6-208ENST00000478914 TRIM34Q9BYJ4 488 aa10.67□□□□□ -0.7
XRCC6-208ENST00000478914 OSBPL5Q9H0X9 879 aaPredicted RBP10.67□□□□□ -0.7
XRCC6-208ENST00000478914 AATFQ9NY61 560 aaKnown RBP eCLIP10.67□□□□□ -0.7
XRCC6-208ENST00000478914 DBNLQ9UJU6 430 aaKnown RBP10.67□□□□□ -0.7
XRCC6-208ENST00000478914 EXOC6BQ9Y2D4 811 aa10.67□□□□□ -0.7
XRCC6-208ENST00000478914 SIPA1L1O43166 1804 aa10.67□□□□□ -0.7
XRCC6-208ENST00000478914 IDH1O75874 414 aaKnown RBP10.66□□□□□ -0.7
XRCC6-208ENST00000478914 HOXD10P28358 340 aa10.66□□□□□ -0.7
XRCC6-208ENST00000478914 PRMT2P55345 433 aa10.66□□□□□ -0.7
XRCC6-208ENST00000478914 AACSQ86V21 672 aa10.66□□□□□ -0.7
XRCC6-208ENST00000478914 RPAP2Q8IXW5 612 aaPredicted RBP10.66□□□□□ -0.7
XRCC6-208ENST00000478914 EAF2Q96CJ1 260 aaPredicted RBP10.66□□□□□ -0.7
XRCC6-208ENST00000478914 TMEM106CQ9BVX2 250 aa10.66□□□□□ -0.7
XRCC6-208ENST00000478914 TBC1D2Q9BYX2 928 aa10.66□□□□□ -0.7
XRCC6-208ENST00000478914 DHX36Q9H2U1 1008 aaKnown RBP10.66□□□□□ -0.7
XRCC6-208ENST00000478914 TLR7Q9NYK1 1049 aaKnown RBP10.66□□□□□ -0.7
XRCC6-208ENST00000478914 CPA4Q9UI42 421 aa10.66□□□□□ -0.7
XRCC6-208ENST00000478914 HERC5Q9UII4 1024 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms