RNA–Protein interactions for RNA: ENST00000478681.1

COL4A2-205, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 337 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-205ENST00000478681 CAP1Q01518 475 aa16.13■□□□□ 0.17
COL4A2-205ENST00000478681 TAF1CQ15572 869 aaPredicted RBP16.13■□□□□ 0.17
COL4A2-205ENST00000478681 ITPRIPQ8IWB1 547 aa16.13■□□□□ 0.17
COL4A2-205ENST00000478681 NSUN4Q96CB9 384 aaKnown RBP16.13■□□□□ 0.17
COL4A2-205ENST00000478681 ZFYVE28Q9HCC9 887 aa16.13■□□□□ 0.17
COL4A2-205ENST00000478681 KCNH4Q9UQ05 1017 aa16.13■□□□□ 0.17
COL4A2-205ENST00000478681 TRIM17Q9Y577 477 aa16.13■□□□□ 0.17
COL4A2-205ENST00000478681 BTBD19C9JJ37 291 aa16.12■□□□□ 0.17
COL4A2-205ENST00000478681 SURF6O75683 361 aaKnown RBP16.12■□□□□ 0.17
COL4A2-205ENST00000478681 MAP4K4O95819 1239 aaPredicted RBP16.12■□□□□ 0.17
COL4A2-205ENST00000478681 TNNI3KQ59H18 835 aa16.12■□□□□ 0.17
COL4A2-205ENST00000478681 TBC1D9Q6ZT07 1266 aa16.12■□□□□ 0.17
COL4A2-205ENST00000478681 CD99L2Q8TCZ2 262 aa16.12■□□□□ 0.17
COL4A2-205ENST00000478681 C1orf115Q9H7X2 142 aa16.12■□□□□ 0.17
COL4A2-205ENST00000478681 DDX4Q9NQI0 724 aaKnown RBP16.12■□□□□ 0.17
COL4A2-205ENST00000478681 FPGT-TNNI3KV9GXZ4 949 aa16.12■□□□□ 0.17
COL4A2-205ENST00000478681 DOCK2Q92608 1830 aa16.11■□□□□ 0.17
COL4A2-205ENST00000478681 DDTLA6NHG4 134 aaPredicted RBP16.11■□□□□ 0.17
COL4A2-205ENST00000478681 TLR2O60603 784 aa16.11■□□□□ 0.17
COL4A2-205ENST00000478681 LDHCP07864 332 aa16.11■□□□□ 0.17
COL4A2-205ENST00000478681 GSTO1P78417 241 aa16.11■□□□□ 0.17
COL4A2-205ENST00000478681 ZNF512BQ96KM6 892 aaPredicted RBP16.11■□□□□ 0.17
COL4A2-205ENST00000478681 EFCC1Q9HA90 598 aa16.11■□□□□ 0.17
COL4A2-205ENST00000478681 PTPN22Q9Y2R2 807 aa16.11■□□□□ 0.17
COL4A2-205ENST00000478681 MOGSQ13724 837 aa16.1■□□□□ 0.17
COL4A2-205ENST00000478681 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.1■□□□□ 0.17
COL4A2-205ENST00000478681 DBNDD2Q9BQY9 259 aa16.1■□□□□ 0.17
COL4A2-205ENST00000478681 CXCL11O14625 94 aa16.09■□□□□ 0.17
COL4A2-205ENST00000478681 TBC1D12O60347 775 aa16.09■□□□□ 0.17
COL4A2-205ENST00000478681 OS9Q13438 667 aaPredicted RBP16.09■□□□□ 0.17
COL4A2-205ENST00000478681 CCDC158Q5M9N0 1113 aa16.09■□□□□ 0.17
COL4A2-205ENST00000478681 CEP85Q6P2H3 762 aa16.09■□□□□ 0.17
COL4A2-205ENST00000478681 ANKRD23Q86SG2 305 aa16.09■□□□□ 0.17
COL4A2-205ENST00000478681 RAI14Q9P0K7 980 aa16.09■□□□□ 0.17
COL4A2-205ENST00000478681 MYO5AQ9Y4I1 1855 aaKnown RBP16.08■□□□□ 0.17
COL4A2-205ENST00000478681 IGSF3O75054 1194 aa16.08■□□□□ 0.16
COL4A2-205ENST00000478681 ARHGEF6Q15052 776 aa16.08■□□□□ 0.16
COL4A2-205ENST00000478681 TTC39AQ5SRH9 613 aa16.08■□□□□ 0.16
COL4A2-205ENST00000478681 ZSCAN29Q8IWY8 852 aaPredicted RBP16.08■□□□□ 0.16
COL4A2-205ENST00000478681 SCYL3Q8IZE3 742 aa16.08■□□□□ 0.16
COL4A2-205ENST00000478681 PANK1Q8TE04 598 aa16.08■□□□□ 0.16
COL4A2-205ENST00000478681 LRP2BPQ9P2M1 347 aa16.08■□□□□ 0.16
COL4A2-205ENST00000478681 CTNND1O60716 968 aaKnown RBP16.07■□□□□ 0.16
COL4A2-205ENST00000478681 CYP2E1P05181 493 aaPredicted RBP16.07■□□□□ 0.16
COL4A2-205ENST00000478681 SLURP2P0DP57 97 aa16.07■□□□□ 0.16
COL4A2-205ENST00000478681 PTPRAP18433 802 aa16.07■□□□□ 0.16
COL4A2-205ENST00000478681 PPP4CP60510 307 aa16.07■□□□□ 0.16
COL4A2-205ENST00000478681 PICALMQ13492 652 aa16.07■□□□□ 0.16
COL4A2-205ENST00000478681 C17orf99Q6UX52 265 aa16.07■□□□□ 0.16
COL4A2-205ENST00000478681 ARMC5Q96C12 935 aa16.07■□□□□ 0.16
COL4A2-205ENST00000478681 EAF2Q96CJ1 260 aaPredicted RBP16.07■□□□□ 0.16
COL4A2-205ENST00000478681 SNRKQ9NRH2 765 aa16.07■□□□□ 0.16
COL4A2-205ENST00000478681 DBNLQ9UJU6 430 aaKnown RBP16.07■□□□□ 0.16
COL4A2-205ENST00000478681 COL2A1P02458 1487 aaPredicted RBP16.07■□□□□ 0.16
COL4A2-205ENST00000478681 PTPRFP10586 1907 aa16.06■□□□□ 0.16
COL4A2-205ENST00000478681 PHIPQ8WWQ0 1821 aa16.06■□□□□ 0.16
COL4A2-205ENST00000478681 MS4A1P11836 297 aa16.06■□□□□ 0.16
COL4A2-205ENST00000478681 GPAT2Q6NUI2 795 aa16.06■□□□□ 0.16
COL4A2-205ENST00000478681 AFG3L2Q9Y4W6 797 aa16.06■□□□□ 0.16
COL4A2-205ENST00000478681 ZHX2Q9Y6X8 837 aa16.06■□□□□ 0.16
COL4A2-205ENST00000478681 CEP290O15078 2479 aa16.05■□□□□ 0.16
COL4A2-205ENST00000478681 ADGRA2Q96PE1 1338 aa16.05■□□□□ 0.16
COL4A2-205ENST00000478681 PDHXO00330 501 aa16.05■□□□□ 0.16
COL4A2-205ENST00000478681 LACTBP83111 547 aaPredicted RBP16.05■□□□□ 0.16
COL4A2-205ENST00000478681 OSBPL5Q9H0X9 879 aaPredicted RBP16.05■□□□□ 0.16
COL4A2-205ENST00000478681 PICK1Q9NRD5 415 aa16.05■□□□□ 0.16
COL4A2-205ENST00000478681 TLR7Q9NYK1 1049 aaKnown RBP16.05■□□□□ 0.16
COL4A2-205ENST00000478681 DOCK1Q14185 1865 aa16.04■□□□□ 0.16
COL4A2-205ENST00000478681 A0A0G2JLL6 359 aaPredicted RBP16.04■□□□□ 0.16
COL4A2-205ENST00000478681 GNRH1P01148 92 aa16.04■□□□□ 0.16
COL4A2-205ENST00000478681 ZAP70P43403 619 aa16.04■□□□□ 0.16
COL4A2-205ENST00000478681 NAA16Q6N069 864 aaPredicted RBP16.04■□□□□ 0.16
COL4A2-205ENST00000478681 PRRT2Q7Z6L0 340 aaPredicted RBP16.04■□□□□ 0.16
COL4A2-205ENST00000478681 TEX11Q8IYF3 940 aa16.04■□□□□ 0.16
COL4A2-205ENST00000478681 SH3RF3Q8TEJ3 882 aaPredicted RBP16.04■□□□□ 0.16
COL4A2-205ENST00000478681 CCDC8Q9H0W5 538 aaPredicted RBP16.04■□□□□ 0.16
COL4A2-205ENST00000478681 CDK5RAP2Q96SN8 1893 aa16.03■□□□□ 0.16
COL4A2-205ENST00000478681 BAG3O95817 575 aa16.03■□□□□ 0.16
COL4A2-205ENST00000478681 FASTKD5Q7L8L6 764 aaKnown RBP16.03■□□□□ 0.16
COL4A2-205ENST00000478681 ADGRA1Q86SQ6 560 aa16.03■□□□□ 0.16
COL4A2-205ENST00000478681 ERC1Q8IUD2 1116 aa16.03■□□□□ 0.16
COL4A2-205ENST00000478681 ARHGAP39Q9C0H5 1083 aa16.03■□□□□ 0.16
COL4A2-205ENST00000478681 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.03■□□□□ 0.16
COL4A2-205ENST00000478681 PIH1D3Q9NQM4 214 aaKnown RBP16.03■□□□□ 0.16
COL4A2-205ENST00000478681 ZBTB40Q9NUA8 1239 aa16.03■□□□□ 0.16
COL4A2-205ENST00000478681 ZSWIM8A7E2V4 1837 aa16.03■□□□□ 0.16
COL4A2-205ENST00000478681 PLCG2P16885 1265 aa16.02■□□□□ 0.16
COL4A2-205ENST00000478681 KIF22Q14807 665 aa16.02■□□□□ 0.16
COL4A2-205ENST00000478681 METTL16Q86W50 562 aaKnown RBP16.02■□□□□ 0.16
COL4A2-205ENST00000478681 RPAP2Q8IXW5 612 aaPredicted RBP16.02■□□□□ 0.16
COL4A2-205ENST00000478681 NOL10Q9BSC4 688 aaKnown RBP16.02■□□□□ 0.16
COL4A2-205ENST00000478681 AATFQ9NY61 560 aaKnown RBP eCLIP16.02■□□□□ 0.16
COL4A2-205ENST00000478681 CPA4Q9UI42 421 aa16.02■□□□□ 0.16
COL4A2-205ENST00000478681 EXOC6BQ9Y2D4 811 aa16.02■□□□□ 0.16
COL4A2-205ENST00000478681 SLC45A1Q9Y2W3 748 aa16.02■□□□□ 0.16
COL4A2-205ENST00000478681 PTCH2Q9Y6C5 1203 aa16.02■□□□□ 0.16
COL4A2-205ENST00000478681 FOCADQ5VW36 1801 aa16.02■□□□□ 0.16
COL4A2-205ENST00000478681 MAST2Q6P0Q8 1798 aa16.02■□□□□ 0.15
COL4A2-205ENST00000478681 RBBP6Q7Z6E9 1792 aaKnown RBP16.02■□□□□ 0.15
COL4A2-205ENST00000478681 DOCK3Q8IZD9 2030 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms