RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 PHF20L1A8MW92 1017 aa23■■□□□ 1.27
SREBF1-212ENST00000478616 APBB1O00213 710 aa23■■□□□ 1.27
SREBF1-212ENST00000478616 RRP1P56182 461 aaKnown RBP23■■□□□ 1.27
SREBF1-212ENST00000478616 DOCK1Q14185 1865 aa23■■□□□ 1.27
SREBF1-212ENST00000478616 ATAD5Q96QE3 1844 aa22.99■■□□□ 1.27
SREBF1-212ENST00000478616 SREBF2Q12772 1141 aa22.99■■□□□ 1.27
SREBF1-212ENST00000478616 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.99■■□□□ 1.27
SREBF1-212ENST00000478616 SH3RF3Q8TEJ3 882 aaPredicted RBP22.99■■□□□ 1.27
SREBF1-212ENST00000478616 BRI3BPQ8WY22 251 aa22.99■■□□□ 1.27
SREBF1-212ENST00000478616 KIF1BPQ96EK5 621 aa22.99■■□□□ 1.27
SREBF1-212ENST00000478616 ZNF341Q9BYN7 854 aa22.99■■□□□ 1.27
SREBF1-212ENST00000478616 LRP2BPQ9P2M1 347 aa22.99■■□□□ 1.27
SREBF1-212ENST00000478616 PCDHB15Q9Y5E8 787 aa22.99■■□□□ 1.27
SREBF1-212ENST00000478616 HMMRO75330 724 aa22.98■■□□□ 1.27
SREBF1-212ENST00000478616 NPM3O75607 178 aaKnown RBP22.98■■□□□ 1.27
SREBF1-212ENST00000478616 PPP4CP60510 307 aa22.98■■□□□ 1.27
SREBF1-212ENST00000478616 HSP90AB4PQ58FF6 505 aa22.98■■□□□ 1.27
SREBF1-212ENST00000478616 SLF2Q8IX21 1173 aa22.98■■□□□ 1.27
SREBF1-212ENST00000478616 COL2A1P02458 1487 aaPredicted RBP22.98■■□□□ 1.27
SREBF1-212ENST00000478616 DDX60LQ5H9U9 1706 aaKnown RBP22.97■■□□□ 1.27
SREBF1-212ENST00000478616 CAP1Q01518 475 aa22.97■■□□□ 1.27
SREBF1-212ENST00000478616 PICALMQ13492 652 aa22.97■■□□□ 1.27
SREBF1-212ENST00000478616 OTUD5Q96G74 571 aa22.97■■□□□ 1.27
SREBF1-212ENST00000478616 MCOLN1Q9GZU1 580 aa22.97■■□□□ 1.27
SREBF1-212ENST00000478616 MYH1P12882 1939 aa22.96■■□□□ 1.27
SREBF1-212ENST00000478616 SMARCA5O60264 1052 aaPredicted RBP22.96■■□□□ 1.27
SREBF1-212ENST00000478616 RAB11FIP3O75154 756 aa22.96■■□□□ 1.27
SREBF1-212ENST00000478616 LDHCP07864 332 aa22.96■■□□□ 1.27
SREBF1-212ENST00000478616 GSTO1P78417 241 aa22.96■■□□□ 1.27
SREBF1-212ENST00000478616 DCAF15Q66K64 600 aa22.96■■□□□ 1.27
SREBF1-212ENST00000478616 NAA16Q6N069 864 aaPredicted RBP22.96■■□□□ 1.27
SREBF1-212ENST00000478616 ZNF296Q8WUU4 475 aaPredicted RBP22.96■■□□□ 1.27
SREBF1-212ENST00000478616 ABHD8Q96I13 439 aa22.96■■□□□ 1.27
SREBF1-212ENST00000478616 AATFQ9NY61 560 aaKnown RBP eCLIP22.96■■□□□ 1.27
SREBF1-212ENST00000478616 MYH7P12883 1935 aa22.96■■□□□ 1.27
SREBF1-212ENST00000478616 ZSWIM8A7E2V4 1837 aa22.95■■□□□ 1.26
SREBF1-212ENST00000478616 GPR25O00155 361 aa22.95■■□□□ 1.26
SREBF1-212ENST00000478616 IRF6O14896 467 aa22.95■■□□□ 1.26
SREBF1-212ENST00000478616 CAPN15O75808 1086 aa22.95■■□□□ 1.26
SREBF1-212ENST00000478616 INHBEP58166 350 aa22.95■■□□□ 1.26
SREBF1-212ENST00000478616 DYNLL1P63167 89 aaKnown RBP22.95■■□□□ 1.26
SREBF1-212ENST00000478616 MOGSQ13724 837 aa22.95■■□□□ 1.26
SREBF1-212ENST00000478616 RRP1BQ14684 758 aaKnown RBP22.95■■□□□ 1.26
SREBF1-212ENST00000478616 NOM1Q5C9Z4 860 aaKnown RBP22.95■■□□□ 1.26
SREBF1-212ENST00000478616 NOL9Q5SY16 702 aaKnown RBP22.95■■□□□ 1.26
SREBF1-212ENST00000478616 ERO1BQ86YB8 467 aa22.95■■□□□ 1.26
SREBF1-212ENST00000478616 EDC3Q96F86 508 aaKnown RBP22.95■■□□□ 1.26
SREBF1-212ENST00000478616 OSBPL5Q9H0X9 879 aaPredicted RBP22.95■■□□□ 1.26
SREBF1-212ENST00000478616 CHMP4BQ9H444 224 aaKnown RBP22.95■■□□□ 1.26
SREBF1-212ENST00000478616 CSADQ9Y600 493 aa22.95■■□□□ 1.26
SREBF1-212ENST00000478616 FAM196BA6NMK8 535 aa22.94■■□□□ 1.26
SREBF1-212ENST00000478616 FAM43AQ8N2R8 423 aa22.94■■□□□ 1.26
SREBF1-212ENST00000478616 DCTPP1Q9H773 170 aa22.94■■□□□ 1.26
SREBF1-212ENST00000478616 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.94■■□□□ 1.26
SREBF1-212ENST00000478616 MAP4K4O95819 1239 aaPredicted RBP22.93■■□□□ 1.26
SREBF1-212ENST00000478616 PPIL2Q13356 520 aa22.93■■□□□ 1.26
SREBF1-212ENST00000478616 CLASRPQ8N2M8 674 aaKnown RBP22.93■■□□□ 1.26
SREBF1-212ENST00000478616 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.93■■□□□ 1.26
SREBF1-212ENST00000478616 HOOK2Q96ED9 719 aa22.93■■□□□ 1.26
SREBF1-212ENST00000478616 CRHR2Q13324 411 aa22.92■■□□□ 1.26
SREBF1-212ENST00000478616 TEX11Q8IYF3 940 aa22.92■■□□□ 1.26
SREBF1-212ENST00000478616 CRBNQ96SW2 442 aa22.92■■□□□ 1.26
SREBF1-212ENST00000478616 CCL15-CCL14A0A0B4J2E2 113 aa22.91■■□□□ 1.26
SREBF1-212ENST00000478616 IDH1O75874 414 aaKnown RBP22.91■■□□□ 1.26
SREBF1-212ENST00000478616 CHGBP05060 677 aa22.91■■□□□ 1.26
SREBF1-212ENST00000478616 DGKZQ13574 1117 aa22.91■■□□□ 1.26
SREBF1-212ENST00000478616 CCL15Q16663 113 aa22.91■■□□□ 1.26
SREBF1-212ENST00000478616 MAGEB6Q8N7X4 407 aa22.91■■□□□ 1.26
SREBF1-212ENST00000478616 DNAJC18Q9H819 358 aa22.91■■□□□ 1.26
SREBF1-212ENST00000478616 KCNH4Q9UQ05 1017 aa22.91■■□□□ 1.26
SREBF1-212ENST00000478616 FLT1P17948 1338 aa22.9■■□□□ 1.26
SREBF1-212ENST00000478616 TBC1D12O60347 775 aa22.9■■□□□ 1.26
SREBF1-212ENST00000478616 IGSF3O75054 1194 aa22.9■■□□□ 1.26
SREBF1-212ENST00000478616 CYP7A1P22680 504 aa22.9■■□□□ 1.26
SREBF1-212ENST00000478616 PPATQ06203 517 aa22.9■■□□□ 1.26
SREBF1-212ENST00000478616 SLFNL1Q499Z3 407 aa22.9■■□□□ 1.26
SREBF1-212ENST00000478616 TCRBV5S4A2TA0A5A2 114 aa22.89■■□□□ 1.25
SREBF1-212ENST00000478616 ALDH1A1P00352 501 aa22.89■■□□□ 1.25
SREBF1-212ENST00000478616 GTF2A2P52657 109 aa22.89■■□□□ 1.25
SREBF1-212ENST00000478616 JAG1P78504 1218 aa22.89■■□□□ 1.25
SREBF1-212ENST00000478616 CCDC84Q86UT8 332 aaPredicted RBP22.89■■□□□ 1.25
SREBF1-212ENST00000478616 ZSCAN29Q8IWY8 852 aaPredicted RBP22.89■■□□□ 1.25
SREBF1-212ENST00000478616 MIGA1Q8NAN2 632 aa22.89■■□□□ 1.25
SREBF1-212ENST00000478616 TGFBRAP1Q8WUH2 860 aa22.89■■□□□ 1.25
SREBF1-212ENST00000478616 RIOK1Q9BRS2 568 aaKnown RBP22.89■■□□□ 1.25
SREBF1-212ENST00000478616 HTTP42858 3142 aa22.89■■□□□ 1.25
SREBF1-212ENST00000478616 NAV1Q8NEY1 1877 aa22.89■■□□□ 1.25
SREBF1-212ENST00000478616 BTBD19C9JJ37 291 aa22.88■■□□□ 1.25
SREBF1-212ENST00000478616 IFIT2P09913 472 aaKnown RBP22.88■■□□□ 1.25
SREBF1-212ENST00000478616 ATP5JP18859 108 aa22.88■■□□□ 1.25
SREBF1-212ENST00000478616 METTL16Q86W50 562 aaKnown RBP22.88■■□□□ 1.25
SREBF1-212ENST00000478616 MAPKAPK5Q8IW41 473 aa22.88■■□□□ 1.25
SREBF1-212ENST00000478616 SCYL3Q8IZE3 742 aa22.88■■□□□ 1.25
SREBF1-212ENST00000478616 LRRCC1Q9C099 1032 aa22.88■■□□□ 1.25
SREBF1-212ENST00000478616 BCL11AQ9H165 835 aa22.88■■□□□ 1.25
SREBF1-212ENST00000478616 GOLIM4O00461 696 aa22.87■■□□□ 1.25
SREBF1-212ENST00000478616 PTPRAP18433 802 aa22.87■■□□□ 1.25
SREBF1-212ENST00000478616 SHROOM1Q2M3G4 852 aaPredicted RBP22.87■■□□□ 1.25
SREBF1-212ENST00000478616 BOLA2Q9H3K6 86 aa22.87■■□□□ 1.25
SREBF1-212ENST00000478616 LOC285556D6RIA3 1793 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms