RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 ZNF384Q8TF68 577 aa14.06□□□□□ -0.16
PDCD11-204ENST00000478543 RUFY2Q8WXA3 655 aa14.06□□□□□ -0.16
PDCD11-204ENST00000478543 APPBP2Q92624 585 aa14.06□□□□□ -0.16
PDCD11-204ENST00000478543 NSUN4Q96CB9 384 aaKnown RBP14.06□□□□□ -0.16
PDCD11-204ENST00000478543 BACH2Q9BYV9 841 aa14.06□□□□□ -0.16
PDCD11-204ENST00000478543 UBE2Q2LH0YL09 131 aa14.05□□□□□ -0.16
PDCD11-204ENST00000478543 SEC24BO95487 1268 aa14.05□□□□□ -0.16
PDCD11-204ENST00000478543 VIL1P09327 827 aaKnown RBP14.05□□□□□ -0.16
PDCD11-204ENST00000478543 MKRN3Q13064 507 aaKnown RBP14.05□□□□□ -0.16
PDCD11-204ENST00000478543 UBE3CQ15386 1083 aa14.05□□□□□ -0.16
PDCD11-204ENST00000478543 RSBN1LQ6PCB5 846 aaPredicted RBP14.05□□□□□ -0.16
PDCD11-204ENST00000478543 ADGRA1Q86SQ6 560 aa14.05□□□□□ -0.16
PDCD11-204ENST00000478543 KIAA0825Q8IV33 1275 aa14.05□□□□□ -0.16
PDCD11-204ENST00000478543 OSBP2Q969R2 916 aa14.05□□□□□ -0.16
PDCD11-204ENST00000478543 HELLSQ9NRZ9 838 aa14.05□□□□□ -0.16
PDCD11-204ENST00000478543 TTF2Q9UNY4 1162 aaKnown RBP14.05□□□□□ -0.16
PDCD11-204ENST00000478543 MAST3O60307 1309 aa14.05□□□□□ -0.16
PDCD11-204ENST00000478543 SGSM2O43147 1006 aa14.04□□□□□ -0.16
PDCD11-204ENST00000478543 TM4SF4P48230 202 aa14.04□□□□□ -0.16
PDCD11-204ENST00000478543 ZNF280AP59817 542 aaPredicted RBP14.04□□□□□ -0.16
PDCD11-204ENST00000478543 FKBP1AP62942 108 aaKnown RBP14.04□□□□□ -0.16
PDCD11-204ENST00000478543 GSTO1P78417 241 aa14.04□□□□□ -0.16
PDCD11-204ENST00000478543 MCMDC2Q4G0Z9 681 aa14.04□□□□□ -0.16
PDCD11-204ENST00000478543 ZNF589Q86UQ0 364 aaPredicted RBP14.04□□□□□ -0.16
PDCD11-204ENST00000478543 TICAM2Q86XR7 235 aa14.04□□□□□ -0.16
PDCD11-204ENST00000478543 REM2Q8IYK8 340 aaPredicted RBP14.04□□□□□ -0.16
PDCD11-204ENST00000478543 MIGA1Q8NAN2 632 aa14.04□□□□□ -0.16
PDCD11-204ENST00000478543 PUS7LQ9H0K6 701 aaKnown RBP14.04□□□□□ -0.16
PDCD11-204ENST00000478543 LAMA3Q16787 3333 aa14.03□□□□□ -0.16
PDCD11-204ENST00000478543 DYNLL1P63167 89 aaKnown RBP14.03□□□□□ -0.16
PDCD11-204ENST00000478543 CAP1Q01518 475 aa14.03□□□□□ -0.16
PDCD11-204ENST00000478543 NOM1Q5C9Z4 860 aaKnown RBP14.03□□□□□ -0.16
PDCD11-204ENST00000478543 SUGT1Q9Y2Z0 365 aa14.03□□□□□ -0.16
PDCD11-204ENST00000478543 MROH7-TTC4A0A0A0MT08 1334 aa14.03□□□□□ -0.16
PDCD11-204ENST00000478543 MYO3BQ8WXR4 1341 aa14.03□□□□□ -0.16
PDCD11-204ENST00000478543 RAD50Q92878 1312 aa14.03□□□□□ -0.16
PDCD11-204ENST00000478543 CCDC171Q6TFL3 1326 aa14.02□□□□□ -0.17
PDCD11-204ENST00000478543 GPAA1O43292 621 aa14.02□□□□□ -0.17
PDCD11-204ENST00000478543 MBD4O95243 580 aa14.02□□□□□ -0.17
PDCD11-204ENST00000478543 LDHCP07864 332 aa14.02□□□□□ -0.17
PDCD11-204ENST00000478543 LCORLQ8N3X6 602 aa14.02□□□□□ -0.17
PDCD11-204ENST00000478543 GMLQ99445 158 aa14.02□□□□□ -0.17
PDCD11-204ENST00000478543 ARMT1Q9H993 441 aa14.02□□□□□ -0.17
PDCD11-204ENST00000478543 ANO2Q9NQ90 1003 aa14.02□□□□□ -0.17
PDCD11-204ENST00000478543 MAGEB6P1A0A0J9YX57 407 aa14.01□□□□□ -0.17
PDCD11-204ENST00000478543 RBM5P52756 815 aaKnown RBP eCLIP14.01□□□□□ -0.17
PDCD11-204ENST00000478543 FKBP1BP68106 108 aa14.01□□□□□ -0.17
PDCD11-204ENST00000478543 KIAA1211Q6ZU35 1233 aa14.01□□□□□ -0.17
PDCD11-204ENST00000478543 SLF2Q8IX21 1173 aa14.01□□□□□ -0.17
PDCD11-204ENST00000478543 AGBL3Q8NEM8 1001 aa14.01□□□□□ -0.17
PDCD11-204ENST00000478543 NOL10Q9BSC4 688 aaKnown RBP14.01□□□□□ -0.17
PDCD11-204ENST00000478543 AATFQ9NY61 560 aaKnown RBP eCLIP14.01□□□□□ -0.17
PDCD11-204ENST00000478543 MYH2Q9UKX2 1941 aa14.01□□□□□ -0.17
PDCD11-204ENST00000478543 IGSF3O75054 1194 aa14□□□□□ -0.17
PDCD11-204ENST00000478543 FKTNO75072 461 aa14□□□□□ -0.17
PDCD11-204ENST00000478543 REC8O95072 547 aa14□□□□□ -0.17
PDCD11-204ENST00000478543 EN2P19622 333 aaPredicted RBP14□□□□□ -0.17
PDCD11-204ENST00000478543 BTDP43251 543 aa14□□□□□ -0.17
PDCD11-204ENST00000478543 CRKP46108 304 aa14□□□□□ -0.17
PDCD11-204ENST00000478543 TEKT1Q969V4 418 aa14□□□□□ -0.17
PDCD11-204ENST00000478543 CFHR5Q9BXR6 569 aa14□□□□□ -0.17
PDCD11-204ENST00000478543 FZD1Q9UP38 647 aa14□□□□□ -0.17
PDCD11-204ENST00000478543 COLQQ9Y215 455 aaPredicted RBP14□□□□□ -0.17
PDCD11-204ENST00000478543 DAGLAQ9Y4D2 1042 aa14□□□□□ -0.17
PDCD11-204ENST00000478543 PCDHAC2Q9Y5I4 1007 aa14□□□□□ -0.17
PDCD11-204ENST00000478543 GAKO14976 1311 aa13.99□□□□□ -0.17
PDCD11-204ENST00000478543 USP17L8P0C7I0 530 aa13.99□□□□□ -0.17
PDCD11-204ENST00000478543 PTH1RQ03431 593 aa13.99□□□□□ -0.17
PDCD11-204ENST00000478543 NBPF9Q3BBW0 867 aa13.99□□□□□ -0.17
PDCD11-204ENST00000478543 VPS53Q5VIR6 699 aa13.99□□□□□ -0.17
PDCD11-204ENST00000478543 TMED8Q6PL24 325 aaPredicted RBP13.99□□□□□ -0.17
PDCD11-204ENST00000478543 OTOP1Q7RTM1 612 aa13.99□□□□□ -0.17
PDCD11-204ENST00000478543 STRBPQ96SI9 672 aaKnown RBP13.99□□□□□ -0.17
PDCD11-204ENST00000478543 RIOK1Q9BRS2 568 aaKnown RBP13.99□□□□□ -0.17
PDCD11-204ENST00000478543 LSG1Q9H089 658 aaKnown RBP13.99□□□□□ -0.17
PDCD11-204ENST00000478543 MYOZ2Q9NPC6 264 aa13.99□□□□□ -0.17
PDCD11-204ENST00000478543 PITPNM2Q9BZ72 1349 aa13.98□□□□□ -0.17
PDCD11-204ENST00000478543 PRKAB2O43741 272 aa13.98□□□□□ -0.17
PDCD11-204ENST00000478543 EIF5BO60841 1220 aaKnown RBP13.98□□□□□ -0.17
PDCD11-204ENST00000478543 BAG3O95817 575 aa13.98□□□□□ -0.17
PDCD11-204ENST00000478543 CFAP100Q494V2 611 aa13.98□□□□□ -0.17
PDCD11-204ENST00000478543 HHIPL2Q6UWX4 724 aa13.98□□□□□ -0.17
PDCD11-204ENST00000478543 SH3RF3Q8TEJ3 882 aaPredicted RBP13.98□□□□□ -0.17
PDCD11-204ENST00000478543 UPF2Q9HAU5 1272 aaKnown RBP13.98□□□□□ -0.17
PDCD11-204ENST00000478543 TRIM17Q9Y577 477 aa13.98□□□□□ -0.17
PDCD11-204ENST00000478543 SLC4A4Q9Y6R1 1079 aa13.98□□□□□ -0.17
PDCD11-204ENST00000478543 LAMB1P07942 1786 aa13.98□□□□□ -0.17
PDCD11-204ENST00000478543 GPR75-ASB3A0A0A6YYF3 556 aa13.97□□□□□ -0.17
PDCD11-204ENST00000478543 APPP05067 770 aa13.97□□□□□ -0.17
PDCD11-204ENST00000478543 HSPD1P10809 573 aaKnown RBP13.97□□□□□ -0.17
PDCD11-204ENST00000478543 HDLBPQ00341 1268 aaKnown RBP13.97□□□□□ -0.17
PDCD11-204ENST00000478543 OGFOD1Q8N543 542 aa13.97□□□□□ -0.17
PDCD11-204ENST00000478543 FAM163AQ96GL9 167 aaPredicted RBP13.97□□□□□ -0.17
PDCD11-204ENST00000478543 USP26Q9BXU7 913 aa13.97□□□□□ -0.17
PDCD11-204ENST00000478543 CRNKL1Q9BZJ0 848 aaKnown RBP13.97□□□□□ -0.17
PDCD11-204ENST00000478543 SERPINA10Q9UK55 444 aa13.97□□□□□ -0.17
PDCD11-204ENST00000478543 FOXP2O15409 715 aa13.96□□□□□ -0.17
PDCD11-204ENST00000478543 PPP4CP60510 307 aa13.96□□□□□ -0.17
PDCD11-204ENST00000478543 DLGAP5Q15398 846 aa13.96□□□□□ -0.17
PDCD11-204ENST00000478543 TEX11Q8IYF3 940 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms