RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 DUSP23Q9BVJ7 150 aa6.88□□□□□ -1.31
HPS3-205ENST00000478525 GPN3Q9UHW5 284 aaPredicted RBP6.88□□□□□ -1.31
HPS3-205ENST00000478525 VAV3Q9UKW4 847 aa6.88□□□□□ -1.31
HPS3-205ENST00000478525 OXCT1P55809 520 aa6.87□□□□□ -1.31
HPS3-205ENST00000478525 MKNK2Q9HBH9 465 aa6.87□□□□□ -1.31
HPS3-205ENST00000478525 PLAGL2Q9UPG8 496 aa6.87□□□□□ -1.31
HPS3-205ENST00000478525 FCGRTP55899 365 aa6.86□□□□□ -1.31
HPS3-205ENST00000478525 AOC3Q16853 763 aa6.86□□□□□ -1.31
HPS3-205ENST00000478525 LCE4AQ5TA78 99 aa6.86□□□□□ -1.31
HPS3-205ENST00000478525 PI16Q6UXB8 463 aa6.86□□□□□ -1.31
HPS3-205ENST00000478525 DTHD1Q6ZMT9 781 aa6.86□□□□□ -1.31
HPS3-205ENST00000478525 ARHGAP27Q6ZUM4 889 aa6.86□□□□□ -1.31
HPS3-205ENST00000478525 TOP6BLQ8N6T0 577 aa6.86□□□□□ -1.31
HPS3-205ENST00000478525 STK35Q8TDR2 534 aa6.86□□□□□ -1.31
HPS3-205ENST00000478525 KCNB2Q92953 911 aa6.86□□□□□ -1.31
HPS3-205ENST00000478525 ISL2Q96A47 359 aa6.86□□□□□ -1.31
HPS3-205ENST00000478525 HRASLS5Q96KN8 279 aa6.86□□□□□ -1.31
HPS3-205ENST00000478525 CSRNP1Q96S65 589 aa6.86□□□□□ -1.31
HPS3-205ENST00000478525 PCOLCE2Q9UKZ9 415 aa6.86□□□□□ -1.31
HPS3-205ENST00000478525 ITIH2P19823 946 aa6.85□□□□□ -1.31
HPS3-205ENST00000478525 HNRNPUQ00839 825 aaKnown RBP eCLIP6.85□□□□□ -1.31
HPS3-205ENST00000478525 PI4K2BQ8TCG2 481 aa6.85□□□□□ -1.31
HPS3-205ENST00000478525 TMC1Q8TDI8 760 aa6.85□□□□□ -1.31
HPS3-205ENST00000478525 TMEM39AQ9NV64 488 aa6.85□□□□□ -1.31
HPS3-205ENST00000478525 TMEM265A0A087WTH1 108 aa6.84□□□□□ -1.31
HPS3-205ENST00000478525 FARP2O94887 1054 aaPredicted RBP6.84□□□□□ -1.31
HPS3-205ENST00000478525 PPP2R3AQ06190 1150 aa6.84□□□□□ -1.31
HPS3-205ENST00000478525 ANGEL2Q5VTE6 544 aaKnown RBP6.84□□□□□ -1.31
HPS3-205ENST00000478525 SULF2Q8IWU5 870 aa6.84□□□□□ -1.31
HPS3-205ENST00000478525 ALKBH8Q96BT7 664 aaKnown RBP6.84□□□□□ -1.31
HPS3-205ENST00000478525 DBX1A6NMT0 343 aa6.83□□□□□ -1.32
HPS3-205ENST00000478525 ZC3H12AQ5D1E8 599 aaKnown RBP6.83□□□□□ -1.32
HPS3-205ENST00000478525 TXNDC2Q86VQ3 553 aa6.83□□□□□ -1.32
HPS3-205ENST00000478525 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.83□□□□□ -1.32
HPS3-205ENST00000478525 TMEM40Q8WWA1 233 aa6.83□□□□□ -1.32
HPS3-205ENST00000478525 HEXIM2Q96MH2 286 aaKnown RBP6.83□□□□□ -1.32
HPS3-205ENST00000478525 TNKS2Q9H2K2 1166 aa6.83□□□□□ -1.32
HPS3-205ENST00000478525 SPOCD1Q6ZMY3 1216 aa6.82□□□□□ -1.32
HPS3-205ENST00000478525 RNF214Q8ND24 703 aa6.82□□□□□ -1.32
HPS3-205ENST00000478525 DMRTB1Q96MA1 342 aa6.82□□□□□ -1.32
HPS3-205ENST00000478525 SSU72Q9NP77 194 aaKnown RBP6.82□□□□□ -1.32
HPS3-205ENST00000478525 PRDM7Q9NQW5 492 aa6.82□□□□□ -1.32
HPS3-205ENST00000478525 ERVK-24P63145 666 aa6.81□□□□□ -1.32
HPS3-205ENST00000478525 MAP1SQ66K74 1059 aaPredicted RBP6.81□□□□□ -1.32
HPS3-205ENST00000478525 SLC23A3Q6PIS1 610 aa6.81□□□□□ -1.32
HPS3-205ENST00000478525 FLAD1Q8NFF5 587 aa6.81□□□□□ -1.32
HPS3-205ENST00000478525 GPBAR1Q8TDU6 330 aa6.81□□□□□ -1.32
HPS3-205ENST00000478525 RBCK1Q9BYM8 510 aa6.81□□□□□ -1.32
HPS3-205ENST00000478525 BCO2Q9BYV7 579 aa6.81□□□□□ -1.32
HPS3-205ENST00000478525 XRCC5P13010 732 aaKnown RBP6.8□□□□□ -1.32
HPS3-205ENST00000478525 ARNTP27540 789 aa6.8□□□□□ -1.32
HPS3-205ENST00000478525 NTF4P34130 210 aa6.8□□□□□ -1.32
HPS3-205ENST00000478525 ZNF252P-AS1Q0IIN9 211 aa6.8□□□□□ -1.32
HPS3-205ENST00000478525 PKN1Q16512 942 aa6.8□□□□□ -1.32
HPS3-205ENST00000478525 FAM214BQ7L5A3 538 aa6.8□□□□□ -1.32
HPS3-205ENST00000478525 UBE3DQ7Z6J8 389 aa6.8□□□□□ -1.32
HPS3-205ENST00000478525 NLRP2Q9NX02 1062 aa6.8□□□□□ -1.32
HPS3-205ENST00000478525 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.8□□□□□ -1.32
HPS3-205ENST00000478525 NME2P22392 152 aa6.79□□□□□ -1.32
HPS3-205ENST00000478525 MESP2Q0VG99 397 aa6.79□□□□□ -1.32
HPS3-205ENST00000478525 PPM1JQ5JR12 505 aa6.79□□□□□ -1.32
HPS3-205ENST00000478525 MPRIPQ6WCQ1 1025 aa6.79□□□□□ -1.32
HPS3-205ENST00000478525 KSR1Q8IVT5 923 aa6.79□□□□□ -1.32
HPS3-205ENST00000478525 SPACA3Q8IXA5 215 aa6.79□□□□□ -1.32
HPS3-205ENST00000478525 CACNA2D2Q9NY47 1150 aa6.79□□□□□ -1.32
HPS3-205ENST00000478525 AKAP2Q9Y2D5 859 aa6.79□□□□□ -1.32
HPS3-205ENST00000478525 SNX11Q9Y5W9 270 aa6.79□□□□□ -1.32
HPS3-205ENST00000478525 IKZF1Q13422 519 aa6.78□□□□□ -1.32
HPS3-205ENST00000478525 ZSWIM9Q86XI8 627 aa6.78□□□□□ -1.32
HPS3-205ENST00000478525 ACSBG1Q96GR2 724 aa6.78□□□□□ -1.32
HPS3-205ENST00000478525 PRDM10Q9NQV6 1147 aa6.78□□□□□ -1.32
HPS3-205ENST00000478525 GTF3C3Q9Y5Q9 886 aa6.78□□□□□ -1.32
HPS3-205ENST00000478525 CSADQ9Y600 493 aa6.78□□□□□ -1.32
HPS3-205ENST00000478525 ZP2Q05996 745 aa6.77□□□□□ -1.33
HPS3-205ENST00000478525 FBLN7Q53RD9 439 aa6.77□□□□□ -1.33
HPS3-205ENST00000478525 NXPE4Q6UWF7 544 aa6.77□□□□□ -1.33
HPS3-205ENST00000478525 TMC7Q7Z402 723 aa6.77□□□□□ -1.33
HPS3-205ENST00000478525 C3orf58Q8NDZ4 430 aa6.77□□□□□ -1.33
HPS3-205ENST00000478525 SLC38A3Q99624 504 aa6.77□□□□□ -1.33
HPS3-205ENST00000478525 EMILIN2Q9BXX0 1053 aa6.77□□□□□ -1.33
HPS3-205ENST00000478525 CBX8Q9HC52 389 aa6.77□□□□□ -1.33
HPS3-205ENST00000478525 PPP4R2Q9NY27 417 aa6.77□□□□□ -1.33
HPS3-205ENST00000478525 GTF2IRD1Q9UHL9 959 aa6.77□□□□□ -1.33
HPS3-205ENST00000478525 ZNF503-AS2A6NEH8 195 aa6.76□□□□□ -1.33
HPS3-205ENST00000478525 LRRC10BA6NIK2 292 aa6.76□□□□□ -1.33
HPS3-205ENST00000478525 IGF2BP3O00425 579 aaKnown RBP eCLIP6.76□□□□□ -1.33
HPS3-205ENST00000478525 NKPD1Q17RQ9 610 aa6.76□□□□□ -1.33
HPS3-205ENST00000478525 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.76□□□□□ -1.33
HPS3-205ENST00000478525 GRIN3AQ8TCU5 1115 aa6.76□□□□□ -1.33
HPS3-205ENST00000478525 ASB11Q8WXH4 323 aa6.76□□□□□ -1.33
HPS3-205ENST00000478525 NECAB3Q96P71 396 aaPredicted RBP6.76□□□□□ -1.33
HPS3-205ENST00000478525 PITPNM2Q9BZ72 1349 aa6.76□□□□□ -1.33
HPS3-205ENST00000478525 DCDC2CA8MYV0 355 aa6.75□□□□□ -1.33
HPS3-205ENST00000478525 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.75□□□□□ -1.33
HPS3-205ENST00000478525 KCNMB1Q16558 191 aa6.75□□□□□ -1.33
HPS3-205ENST00000478525 FAM84AQ96KN4 292 aa6.75□□□□□ -1.33
HPS3-205ENST00000478525 CTNND2Q9UQB3 1225 aa6.75□□□□□ -1.33
HPS3-205ENST00000478525 PNMA6FA0A0J9YX94 578 aa6.74□□□□□ -1.33
HPS3-205ENST00000478525 ENC1O14682 589 aa6.74□□□□□ -1.33
HPS3-205ENST00000478525 PAGE1O75459 146 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms