RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 NPM3O75607 178 aaKnown RBP17.77■□□□□ 0.44
SMARCE1-209ENST00000478349 ARID4AP29374 1257 aaPredicted RBP17.77■□□□□ 0.44
SMARCE1-209ENST00000478349 SCYL3Q8IZE3 742 aa17.77■□□□□ 0.44
SMARCE1-209ENST00000478349 GPR108Q9NPR9 543 aa17.77■□□□□ 0.44
SMARCE1-209ENST00000478349 RFX7Q2KHR2 1363 aa17.77■□□□□ 0.43
SMARCE1-209ENST00000478349 HOXD10P28358 340 aa17.76■□□□□ 0.43
SMARCE1-209ENST00000478349 LACTBP83111 547 aaPredicted RBP17.76■□□□□ 0.43
SMARCE1-209ENST00000478349 MECOMQ03112 1051 aa17.76■□□□□ 0.43
SMARCE1-209ENST00000478349 PICALMQ13492 652 aa17.76■□□□□ 0.43
SMARCE1-209ENST00000478349 CCDC158Q5M9N0 1113 aa17.76■□□□□ 0.43
SMARCE1-209ENST00000478349 FASTKD5Q7L8L6 764 aaKnown RBP17.76■□□□□ 0.43
SMARCE1-209ENST00000478349 TMEM57Q8N5G2 664 aa17.76■□□□□ 0.43
SMARCE1-209ENST00000478349 RAI14Q9P0K7 980 aa17.76■□□□□ 0.43
SMARCE1-209ENST00000478349 HMG20BQ9P0W2 317 aa17.76■□□□□ 0.43
SMARCE1-209ENST00000478349 LRP2BPQ9P2M1 347 aa17.76■□□□□ 0.43
SMARCE1-209ENST00000478349 GPR75-ASB3A0A0A6YYF3 556 aa17.75■□□□□ 0.43
SMARCE1-209ENST00000478349 PDHXO00330 501 aa17.75■□□□□ 0.43
SMARCE1-209ENST00000478349 ITPRIPQ8IWB1 547 aa17.75■□□□□ 0.43
SMARCE1-209ENST00000478349 PNMA6EA0A0J9YXQ4 647 aa17.74■□□□□ 0.43
SMARCE1-209ENST00000478349 CTNND1O60716 968 aaKnown RBP17.74■□□□□ 0.43
SMARCE1-209ENST00000478349 PLCG2P16885 1265 aa17.74■□□□□ 0.43
SMARCE1-209ENST00000478349 TTC39AQ5SRH9 613 aa17.74■□□□□ 0.43
SMARCE1-209ENST00000478349 ATRNL1Q5VV63 1379 aa17.74■□□□□ 0.43
SMARCE1-209ENST00000478349 BAG3O95817 575 aa17.73■□□□□ 0.43
SMARCE1-209ENST00000478349 POLA2Q14181 598 aa17.73■□□□□ 0.43
SMARCE1-209ENST00000478349 DIEXFQ68CQ4 756 aaKnown RBP17.73■□□□□ 0.43
SMARCE1-209ENST00000478349 TBC1D2Q9BYX2 928 aa17.73■□□□□ 0.43
SMARCE1-209ENST00000478349 PTCH2Q9Y6C5 1203 aa17.73■□□□□ 0.43
SMARCE1-209ENST00000478349 ZHX2Q9Y6X8 837 aa17.73■□□□□ 0.43
SMARCE1-209ENST00000478349 COL2A1P02458 1487 aaPredicted RBP17.73■□□□□ 0.43
SMARCE1-209ENST00000478349 TBC1D12O60347 775 aa17.72■□□□□ 0.43
SMARCE1-209ENST00000478349 MS4A1P11836 297 aa17.72■□□□□ 0.43
SMARCE1-209ENST00000478349 PTPRAP18433 802 aa17.72■□□□□ 0.43
SMARCE1-209ENST00000478349 MAP3K10Q02779 954 aa17.72■□□□□ 0.43
SMARCE1-209ENST00000478349 TNNI3KQ59H18 835 aa17.72■□□□□ 0.43
SMARCE1-209ENST00000478349 C17orf99Q6UX52 265 aa17.72■□□□□ 0.43
SMARCE1-209ENST00000478349 ZFPM1Q8IX07 1006 aa17.72■□□□□ 0.43
SMARCE1-209ENST00000478349 SSH3Q8TE77 659 aa17.72■□□□□ 0.43
SMARCE1-209ENST00000478349 NSUN4Q96CB9 384 aaKnown RBP17.72■□□□□ 0.43
SMARCE1-209ENST00000478349 ZNF333Q96JL9 665 aa17.72■□□□□ 0.43
SMARCE1-209ENST00000478349 SLC45A1Q9Y2W3 748 aa17.72■□□□□ 0.43
SMARCE1-209ENST00000478349 FPGT-TNNI3KV9GXZ4 949 aa17.72■□□□□ 0.43
SMARCE1-209ENST00000478349 PDE4DIPQ5VU43 2346 aa17.71■□□□□ 0.43
SMARCE1-209ENST00000478349 A0A0G2JLL6 359 aaPredicted RBP17.71■□□□□ 0.43
SMARCE1-209ENST00000478349 PHF20L1A8MW92 1017 aa17.71■□□□□ 0.43
SMARCE1-209ENST00000478349 SURF6O75683 361 aaKnown RBP17.71■□□□□ 0.43
SMARCE1-209ENST00000478349 SLC34A2O95436 690 aa17.71■□□□□ 0.43
SMARCE1-209ENST00000478349 MCAMP43121 646 aa17.71■□□□□ 0.43
SMARCE1-209ENST00000478349 ATP8B2P98198 1209 aa17.71■□□□□ 0.43
SMARCE1-209ENST00000478349 SLC4A8Q2Y0W8 1093 aa17.71■□□□□ 0.43
SMARCE1-209ENST00000478349 PRRT2Q7Z6L0 340 aaPredicted RBP17.71■□□□□ 0.43
SMARCE1-209ENST00000478349 GCC1Q96CN9 775 aa17.71■□□□□ 0.43
SMARCE1-209ENST00000478349 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.71■□□□□ 0.432e-6■■■■■ 27.2
SMARCE1-209ENST00000478349 CPA4Q9UI42 421 aa17.71■□□□□ 0.43
SMARCE1-209ENST00000478349 TNNQ9UQP3 1299 aa17.71■□□□□ 0.43
SMARCE1-209ENST00000478349 ZBED9Q6R2W3 1325 aa17.71■□□□□ 0.42
SMARCE1-209ENST00000478349 DDTLA6NHG4 134 aaPredicted RBP17.7■□□□□ 0.42
SMARCE1-209ENST00000478349 FMNL1O95466 1100 aaPredicted RBP17.7■□□□□ 0.42
SMARCE1-209ENST00000478349 FCGRTP55899 365 aa17.7■□□□□ 0.42
SMARCE1-209ENST00000478349 RHBDL3P58872 404 aa17.7■□□□□ 0.42
SMARCE1-209ENST00000478349 NAA16Q6N069 864 aaPredicted RBP17.7■□□□□ 0.42
SMARCE1-209ENST00000478349 PI16Q6UXB8 463 aa17.7■□□□□ 0.42
SMARCE1-209ENST00000478349 CERS3Q8IU89 383 aa17.7■□□□□ 0.42
SMARCE1-209ENST00000478349 ERC1Q8IUD2 1116 aa17.7■□□□□ 0.42
SMARCE1-209ENST00000478349 TEX11Q8IYF3 940 aa17.7■□□□□ 0.42
SMARCE1-209ENST00000478349 OSBPL5Q9H0X9 879 aaPredicted RBP17.7■□□□□ 0.42
SMARCE1-209ENST00000478349 DHX36Q9H2U1 1008 aaKnown RBP17.7■□□□□ 0.42
SMARCE1-209ENST00000478349 DDX4Q9NQI0 724 aaKnown RBP17.7■□□□□ 0.42
SMARCE1-209ENST00000478349 HERC5Q9UII4 1024 aaKnown RBP17.7■□□□□ 0.42
SMARCE1-209ENST00000478349 PNMA3Q9UL41 463 aa17.7■□□□□ 0.42
SMARCE1-209ENST00000478349 PSMC4P43686 418 aa17.69■□□□□ 0.42
SMARCE1-209ENST00000478349 TMED8Q6PL24 325 aaPredicted RBP17.69■□□□□ 0.42
SMARCE1-209ENST00000478349 GADL1Q6ZQY3 521 aa17.69■□□□□ 0.42
SMARCE1-209ENST00000478349 TBC1D9Q6ZT07 1266 aa17.69■□□□□ 0.42
SMARCE1-209ENST00000478349 SH3BP5LQ7L8J4 393 aa17.69■□□□□ 0.42
SMARCE1-209ENST00000478349 RAET1EQ8TD07 263 aa17.69■□□□□ 0.42
SMARCE1-209ENST00000478349 SMCR8Q8TEV9 937 aaPredicted RBP17.69■□□□□ 0.42
SMARCE1-209ENST00000478349 ZNF512BQ96KM6 892 aaPredicted RBP17.69■□□□□ 0.42
SMARCE1-209ENST00000478349 TRIM34Q9BYJ4 488 aa17.69■□□□□ 0.42
SMARCE1-209ENST00000478349 SRRDQ9UH36 339 aa17.69■□□□□ 0.42
SMARCE1-209ENST00000478349 AFG3L2Q9Y4W6 797 aa17.69■□□□□ 0.42
SMARCE1-209ENST00000478349 DOCK2Q92608 1830 aa17.69■□□□□ 0.42
SMARCE1-209ENST00000478349 POTEFA5A3E0 1075 aa17.68■□□□□ 0.42
SMARCE1-209ENST00000478349 PABPC4Q13310 644 aaKnown RBP eCLIP17.68■□□□□ 0.42
SMARCE1-209ENST00000478349 HSP90AB4PQ58FF6 505 aa17.68■□□□□ 0.42
SMARCE1-209ENST00000478349 MIER1Q8N108 512 aa17.68■□□□□ 0.42
SMARCE1-209ENST00000478349 ARHGAP39Q9C0H5 1083 aa17.68■□□□□ 0.42
SMARCE1-209ENST00000478349 NOP58Q9Y2X3 529 aaKnown RBP17.68■□□□□ 0.42
SMARCE1-209ENST00000478349 ADGRA2Q96PE1 1338 aa17.68■□□□□ 0.42
SMARCE1-209ENST00000478349 TRIM75PA6NK02 468 aa17.67■□□□□ 0.42
SMARCE1-209ENST00000478349 NKX2-3Q8TAU0 364 aa17.67■□□□□ 0.42
SMARCE1-209ENST00000478349 DBNDD2Q9BQY9 259 aa17.67■□□□□ 0.42
SMARCE1-209ENST00000478349 AS3MTQ9HBK9 375 aa17.67■□□□□ 0.42
SMARCE1-209ENST00000478349 PI4KBQ9UBF8 816 aa17.67■□□□□ 0.42
SMARCE1-209ENST00000478349 AGTPBP1Q9UPW5 1226 aa17.67■□□□□ 0.42
SMARCE1-209ENST00000478349 MYPNQ86TC9 1320 aa17.67■□□□□ 0.42
SMARCE1-209ENST00000478349 MYH2Q9UKX2 1941 aa17.66■□□□□ 0.42
SMARCE1-209ENST00000478349 ZBTB7BO15156 539 aaPredicted RBP17.66■□□□□ 0.42
SMARCE1-209ENST00000478349 MOGSQ13724 837 aa17.66■□□□□ 0.42
SMARCE1-209ENST00000478349 PROCA1Q8NCQ7 364 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms