RNA–Protein interactions for RNA: ENST00000478245.1

TCTN3-205, Transcript of tectonic family member 3, humanhuman

TSL 2

Gene TCTN3, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-205ENST00000478245 PRRT2Q7Z6L0 340 aaPredicted RBP11.91□□□□□ -0.5
TCTN3-205ENST00000478245 MAFAQ8NHW3 353 aaPredicted RBP11.91□□□□□ -0.5
TCTN3-205ENST00000478245 SYMPKQ92797 1274 aaKnown RBP11.91□□□□□ -0.5
TCTN3-205ENST00000478245 SLC45A1Q9Y2W3 748 aa11.91□□□□□ -0.5
TCTN3-205ENST00000478245 DOCK2Q92608 1830 aa11.9□□□□□ -0.5
TCTN3-205ENST00000478245 HHIPL2Q6UWX4 724 aa11.9□□□□□ -0.5
TCTN3-205ENST00000478245 FBXO33Q7Z6M2 555 aa11.9□□□□□ -0.5
TCTN3-205ENST00000478245 LBHD1Q9BQE6 289 aaPredicted RBP11.9□□□□□ -0.5
TCTN3-205ENST00000478245 MYBBP1AQ9BQG0 1328 aaKnown RBP11.89□□□□□ -0.51
TCTN3-205ENST00000478245 PHIPQ8WWQ0 1821 aa11.89□□□□□ -0.51
TCTN3-205ENST00000478245 TWISTNBQ3B726 338 aaPredicted RBP11.89□□□□□ -0.51
TCTN3-205ENST00000478245 EPHA10Q5JZY3 1008 aa11.89□□□□□ -0.51
TCTN3-205ENST00000478245 SCYL3Q8IZE3 742 aa11.89□□□□□ -0.51
TCTN3-205ENST00000478245 TSR2Q969E8 191 aaKnown RBP11.89□□□□□ -0.51
TCTN3-205ENST00000478245 CDX2Q99626 313 aaPredicted RBP11.89□□□□□ -0.51
TCTN3-205ENST00000478245 PUS3Q9BZE2 481 aaKnown RBP11.89□□□□□ -0.51
TCTN3-205ENST00000478245 OGDHLQ9ULD0 1010 aa11.89□□□□□ -0.51
TCTN3-205ENST00000478245 SUGT1Q9Y2Z0 365 aa11.89□□□□□ -0.51
TCTN3-205ENST00000478245 DOCK1Q14185 1865 aa11.89□□□□□ -0.51
TCTN3-205ENST00000478245 PFASO15067 1338 aa11.88□□□□□ -0.51
TCTN3-205ENST00000478245 MYO9BQ13459 2157 aa11.88□□□□□ -0.51
TCTN3-205ENST00000478245 TRIM75PA6NK02 468 aa11.88□□□□□ -0.51
TCTN3-205ENST00000478245 PTPRAP18433 802 aa11.88□□□□□ -0.51
TCTN3-205ENST00000478245 ZEB1P37275 1124 aaPredicted RBP11.88□□□□□ -0.51
TCTN3-205ENST00000478245 TRIM32Q13049 653 aa11.88□□□□□ -0.51
TCTN3-205ENST00000478245 FAM110CQ1W6H9 321 aa11.88□□□□□ -0.51
TCTN3-205ENST00000478245 PNMA3Q9UL41 463 aa11.88□□□□□ -0.51
TCTN3-205ENST00000478245 AFG3L2Q9Y4W6 797 aa11.88□□□□□ -0.51
TCTN3-205ENST00000478245 LRRFIP2Q9Y608 721 aaKnown RBP11.88□□□□□ -0.51
TCTN3-205ENST00000478245 MROH5Q6ZUA9 1318 aa11.87□□□□□ -0.51
TCTN3-205ENST00000478245 BDP1A6H8Y1 2624 aa11.87□□□□□ -0.51
TCTN3-205ENST00000478245 NFIAQ12857 509 aa11.87□□□□□ -0.51
TCTN3-205ENST00000478245 CDC42EP5Q6NZY7 148 aa11.87□□□□□ -0.51
TCTN3-205ENST00000478245 AGTPBP1Q9UPW5 1226 aa11.87□□□□□ -0.51
TCTN3-205ENST00000478245 PLXNB2O15031 1838 aa11.86□□□□□ -0.51
TCTN3-205ENST00000478245 MYH2Q9UKX2 1941 aa11.86□□□□□ -0.51
TCTN3-205ENST00000478245 GRM8O00222 908 aa11.86□□□□□ -0.51
TCTN3-205ENST00000478245 PRKAR2AP13861 404 aaKnown RBP11.86□□□□□ -0.51
TCTN3-205ENST00000478245 LRRC26Q2I0M4 334 aa11.86□□□□□ -0.51
TCTN3-205ENST00000478245 METTL24Q5JXM2 366 aa11.86□□□□□ -0.51
TCTN3-205ENST00000478245 USP40Q9NVE5 1235 aa11.86□□□□□ -0.51
TCTN3-205ENST00000478245 C9orf78Q9NZ63 289 aaPredicted RBP11.86□□□□□ -0.51
TCTN3-205ENST00000478245 DAGLAQ9Y4D2 1042 aa11.86□□□□□ -0.51
TCTN3-205ENST00000478245 COL2A1P02458 1487 aaPredicted RBP11.86□□□□□ -0.51
TCTN3-205ENST00000478245 PHF20L1A8MW92 1017 aa11.85□□□□□ -0.51
TCTN3-205ENST00000478245 CYP2B6P20813 491 aa11.85□□□□□ -0.51
TCTN3-205ENST00000478245 GCLCP48506 637 aaPredicted RBP11.85□□□□□ -0.51
TCTN3-205ENST00000478245 ZSCAN29Q8IWY8 852 aaPredicted RBP11.85□□□□□ -0.51
TCTN3-205ENST00000478245 MYLIPQ8WY64 445 aa11.85□□□□□ -0.51
TCTN3-205ENST00000478245 TRIB2Q92519 343 aa11.85□□□□□ -0.51
TCTN3-205ENST00000478245 SEMA6BQ9H3T3 888 aa11.85□□□□□ -0.51
TCTN3-205ENST00000478245 FAM198AQ9UFP1 575 aa11.85□□□□□ -0.51
TCTN3-205ENST00000478245 PRKAG2Q9UGJ0 569 aa11.85□□□□□ -0.51
TCTN3-205ENST00000478245 GJD2Q9UKL4 321 aa11.85□□□□□ -0.51
TCTN3-205ENST00000478245 FRMPD3Q5JV73 1810 aa11.84□□□□□ -0.51
TCTN3-205ENST00000478245 F6X3S4 739 aa11.84□□□□□ -0.51
TCTN3-205ENST00000478245 TNFRSF10AO00220 468 aa11.84□□□□□ -0.51
TCTN3-205ENST00000478245 CTNND1O60716 968 aaKnown RBP11.84□□□□□ -0.51
TCTN3-205ENST00000478245 COL6A1P12109 1028 aa11.84□□□□□ -0.51
TCTN3-205ENST00000478245 FOSL2P15408 326 aa11.84□□□□□ -0.51
TCTN3-205ENST00000478245 PABPC4Q13310 644 aaKnown RBP eCLIP11.84□□□□□ -0.51
TCTN3-205ENST00000478245 DIXDC1Q155Q3 683 aa11.84□□□□□ -0.51
TCTN3-205ENST00000478245 TREML2Q5T2D2 321 aa11.84□□□□□ -0.51
TCTN3-205ENST00000478245 BEND3Q5T5X7 828 aa11.84□□□□□ -0.51
TCTN3-205ENST00000478245 ZFPM1Q8IX07 1006 aa11.84□□□□□ -0.51
TCTN3-205ENST00000478245 WDR66Q8TBY9 1149 aa11.84□□□□□ -0.51
TCTN3-205ENST00000478245 RAPGEFL1Q9UHV5 662 aa11.84□□□□□ -0.51
TCTN3-205ENST00000478245 MAST2Q6P0Q8 1798 aa11.83□□□□□ -0.52
TCTN3-205ENST00000478245 IFIT1P09914 478 aaKnown RBP11.83□□□□□ -0.52
TCTN3-205ENST00000478245 PROCA1Q8NCQ7 364 aaPredicted RBP11.83□□□□□ -0.52
TCTN3-205ENST00000478245 ATAD5Q96QE3 1844 aa11.83□□□□□ -0.52
TCTN3-205ENST00000478245 LOC285556D6RIA3 1793 aa11.82□□□□□ -0.52
TCTN3-205ENST00000478245 PDE8BO95263 885 aa11.82□□□□□ -0.52
TCTN3-205ENST00000478245 ZKSCAN1P17029 563 aaPredicted RBP11.82□□□□□ -0.52
TCTN3-205ENST00000478245 RGS3P49796 1198 aa11.82□□□□□ -0.52
TCTN3-205ENST00000478245 LRRC24Q50LG9 513 aa11.82□□□□□ -0.52
TCTN3-205ENST00000478245 TJAP1Q5JTD0 557 aa11.82□□□□□ -0.52
TCTN3-205ENST00000478245 MAP3K21Q5TCX8 1036 aa11.82□□□□□ -0.52
TCTN3-205ENST00000478245 CCDC84Q86UT8 332 aaPredicted RBP11.82□□□□□ -0.52
TCTN3-205ENST00000478245 TRMT44Q8IYL2 757 aaKnown RBP11.82□□□□□ -0.52
TCTN3-205ENST00000478245 FAM122AQ96E09 287 aa11.82□□□□□ -0.52
TCTN3-205ENST00000478245 NUDT12Q9BQG2 462 aa11.82□□□□□ -0.52
TCTN3-205ENST00000478245 SENP6Q9GZR1 1112 aaPredicted RBP11.82□□□□□ -0.52
TCTN3-205ENST00000478245 SPINK5Q9NQ38 1064 aaPredicted RBP11.82□□□□□ -0.52
TCTN3-205ENST00000478245 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.82□□□□□ -0.52
TCTN3-205ENST00000478245 LTBP2Q14767 1821 aa11.81□□□□□ -0.52
TCTN3-205ENST00000478245 ATRNL1Q5VV63 1379 aa11.81□□□□□ -0.52
TCTN3-205ENST00000478245 MUC3AQ02505 3323 aa11.81□□□□□ -0.52
TCTN3-205ENST00000478245 TMEM265A0A087WTH1 108 aa11.81□□□□□ -0.52
TCTN3-205ENST00000478245 ENTPD3O75355 529 aa11.81□□□□□ -0.52
TCTN3-205ENST00000478245 LDHBP07195 334 aaKnown RBP11.81□□□□□ -0.52
TCTN3-205ENST00000478245 PLA2G5P39877 138 aa11.81□□□□□ -0.52
TCTN3-205ENST00000478245 CACNB2Q08289 660 aaPredicted RBP11.81□□□□□ -0.52
TCTN3-205ENST00000478245 PDE3AQ14432 1141 aa11.81□□□□□ -0.52
TCTN3-205ENST00000478245 CCAR1Q8IX12 1150 aaKnown RBP11.81□□□□□ -0.52
TCTN3-205ENST00000478245 SOCS4Q8WXH5 440 aa11.81□□□□□ -0.52
TCTN3-205ENST00000478245 ASCC2Q9H1I8 757 aaPredicted RBP11.81□□□□□ -0.52
TCTN3-205ENST00000478245 XRCC5P13010 732 aaKnown RBP11.8□□□□□ -0.52
TCTN3-205ENST00000478245 PRDX5P30044 214 aa11.8□□□□□ -0.52
TCTN3-205ENST00000478245 CCND3P30281 292 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms