RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 HPSEQ9Y251 543 aa11.22□□□□□ -0.61
COL13A1-207ENST00000478219 U3KPZ7 1027 aaPredicted RBP11.22□□□□□ -0.61
COL13A1-207ENST00000478219 IGSF1Q8N6C5 1336 aa11.21□□□□□ -0.61
COL13A1-207ENST00000478219 C8orf76Q96K31 380 aa11.21□□□□□ -0.61
COL13A1-207ENST00000478219 GRIN2DO15399 1336 aa11.21□□□□□ -0.62
COL13A1-207ENST00000478219 ACEP12821 1306 aa11.21□□□□□ -0.62
COL13A1-207ENST00000478219 CCDC196A0A1B0GTZ2 297 aa11.21□□□□□ -0.62
COL13A1-207ENST00000478219 ECM2O94769 699 aaPredicted RBP11.21□□□□□ -0.62
COL13A1-207ENST00000478219 OLFM4Q6UX06 510 aa11.21□□□□□ -0.62
COL13A1-207ENST00000478219 ARHGEF25Q86VW2 580 aa11.21□□□□□ -0.62
COL13A1-207ENST00000478219 POLD4Q9HCU8 107 aa11.21□□□□□ -0.62
COL13A1-207ENST00000478219 HDAC6Q9UBN7 1215 aa11.21□□□□□ -0.62
COL13A1-207ENST00000478219 METP08581 1390 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 A2ML1A8K2U0 1454 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 E7EWF7 191 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 EBAG9O00559 213 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 IBSPP21815 317 aaPredicted RBP11.2□□□□□ -0.62
COL13A1-207ENST00000478219 TDO2P48775 406 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 EIF4A1P60842 406 aaKnown RBP11.2□□□□□ -0.62
COL13A1-207ENST00000478219 NR1I3Q14994 352 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 WDR93Q6P2C0 686 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 SYNE3Q6ZMZ3 975 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 CNPY4Q8N129 248 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 BCAS4Q8TDM0 211 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 NBPF3Q9H094 633 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 SEC31BQ9NQW1 1179 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 TRIM10Q9UDY6 481 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 CAPN7Q9Y6W3 813 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 NCAPD2Q15021 1401 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 AKR1B15C9JRZ8 316 aaPredicted RBP11.2□□□□□ -0.62
COL13A1-207ENST00000478219 KIF1CO43896 1103 aaKnown RBP11.2□□□□□ -0.62
COL13A1-207ENST00000478219 FNTAP49354 379 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 AMPD2Q01433 879 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 KIF23Q02241 960 aaPredicted RBP11.2□□□□□ -0.62
COL13A1-207ENST00000478219 SLC39A14Q15043 492 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 MCMDC2Q4G0Z9 681 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 GRAMD1CQ8IYS0 662 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 NALCNQ8IZF0 1738 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 USHBP1Q8N6Y0 703 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 PRPF38AQ8NAV1 312 aaKnown RBP11.2□□□□□ -0.62
COL13A1-207ENST00000478219 LGR6Q9HBX8 967 aa11.2□□□□□ -0.62
COL13A1-207ENST00000478219 TECPR2O15040 1411 aa11.19□□□□□ -0.62
COL13A1-207ENST00000478219 ENC1O14682 589 aa11.19□□□□□ -0.62
COL13A1-207ENST00000478219 SRGAP2O75044 1071 aa11.19□□□□□ -0.62
COL13A1-207ENST00000478219 INPP5BP32019 993 aa11.19□□□□□ -0.62
COL13A1-207ENST00000478219 ARHGAP25P42331 645 aa11.19□□□□□ -0.62
COL13A1-207ENST00000478219 ATP2B2Q01814 1243 aa11.19□□□□□ -0.62
COL13A1-207ENST00000478219 RASGRP2Q7LDG7 609 aa11.19□□□□□ -0.62
COL13A1-207ENST00000478219 GBP3Q9H0R5 595 aa11.19□□□□□ -0.62
COL13A1-207ENST00000478219 TFR2Q9UP52 801 aa11.19□□□□□ -0.62
COL13A1-207ENST00000478219 MYH8P13535 1937 aa11.19□□□□□ -0.62
COL13A1-207ENST00000478219 NRXN3Q9Y4C0 1643 aa11.19□□□□□ -0.62
COL13A1-207ENST00000478219 PRAMEF22A3QJZ6 481 aa11.19□□□□□ -0.62
COL13A1-207ENST00000478219 RNF225M0QZC1 329 aaPredicted RBP11.19□□□□□ -0.62
COL13A1-207ENST00000478219 GPTP24298 496 aa11.19□□□□□ -0.62
COL13A1-207ENST00000478219 EPHA10Q5JZY3 1008 aa11.19□□□□□ -0.62
COL13A1-207ENST00000478219 SLC9C2Q5TAH2 1124 aa11.19□□□□□ -0.62
COL13A1-207ENST00000478219 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.19□□□□□ -0.62
COL13A1-207ENST00000478219 APTXQ7Z2E3 356 aaKnown RBP11.19□□□□□ -0.62
COL13A1-207ENST00000478219 COG1Q8WTW3 980 aa11.19□□□□□ -0.62
COL13A1-207ENST00000478219 NAPGQ99747 312 aaPredicted RBP11.19□□□□□ -0.62
COL13A1-207ENST00000478219 VIPAS39Q9H9C1 493 aa11.19□□□□□ -0.62
COL13A1-207ENST00000478219 MAN1B1Q9UKM7 699 aa11.19□□□□□ -0.62
COL13A1-207ENST00000478219 TRHP20396 242 aaPredicted RBP11.18□□□□□ -0.62
COL13A1-207ENST00000478219 FXR1P51114 621 aaKnown RBP eCLIP11.18□□□□□ -0.62
COL13A1-207ENST00000478219 MDM2Q00987 491 aaPredicted RBP11.18□□□□□ -0.62
COL13A1-207ENST00000478219 STIM1Q13586 685 aa11.18□□□□□ -0.62
COL13A1-207ENST00000478219 PTPAQ15257 358 aa11.18□□□□□ -0.62
COL13A1-207ENST00000478219 LTV1Q96GA3 475 aaPredicted RBP11.18□□□□□ -0.62
COL13A1-207ENST00000478219 ZNF274Q96GC6 653 aaPredicted RBP11.18□□□□□ -0.62
COL13A1-207ENST00000478219 MMS19Q96T76 1030 aa11.18□□□□□ -0.62
COL13A1-207ENST00000478219 HPS5Q9UPZ3 1129 aa11.18□□□□□ -0.62
COL13A1-207ENST00000478219 PALLDQ8WX93 1383 aa11.18□□□□□ -0.62
COL13A1-207ENST00000478219 CDC25AP30304 524 aa11.18□□□□□ -0.62
COL13A1-207ENST00000478219 CASP14P31944 242 aa11.18□□□□□ -0.62
COL13A1-207ENST00000478219 USP14P54578 494 aa11.18□□□□□ -0.62
COL13A1-207ENST00000478219 ERVK-24P63145 666 aa11.18□□□□□ -0.62
COL13A1-207ENST00000478219 SATB1Q01826 763 aa11.18□□□□□ -0.62
COL13A1-207ENST00000478219 GRIN1Q05586 938 aa11.18□□□□□ -0.62
COL13A1-207ENST00000478219 PPP2R5AQ15172 486 aa11.18□□□□□ -0.62
COL13A1-207ENST00000478219 STK11IPQ8N1F8 1099 aa11.18□□□□□ -0.62
COL13A1-207ENST00000478219 FAM76AQ8TAV0 307 aa11.18□□□□□ -0.62
COL13A1-207ENST00000478219 ZKSCAN4Q969J2 545 aaPredicted RBP11.18□□□□□ -0.62
COL13A1-207ENST00000478219 PANX2Q96RD6 677 aa11.18□□□□□ -0.62
COL13A1-207ENST00000478219 ACBD3Q9H3P7 528 aa11.18□□□□□ -0.62
COL13A1-207ENST00000478219 MYO6Q9UM54 1294 aa11.18□□□□□ -0.62
COL13A1-207ENST00000478219 FMN2Q9NZ56 1722 aa11.17□□□□□ -0.62
COL13A1-207ENST00000478219 USP31Q70CQ4 1352 aa11.17□□□□□ -0.62
COL13A1-207ENST00000478219 GOLGA6CA6NDK9 693 aa11.17□□□□□ -0.62
COL13A1-207ENST00000478219 GOLGA6DP0CG33 693 aa11.17□□□□□ -0.62
COL13A1-207ENST00000478219 AMPHP49418 695 aa11.17□□□□□ -0.62
COL13A1-207ENST00000478219 WHAMMP3Q1A5X7 153 aa11.17□□□□□ -0.62
COL13A1-207ENST00000478219 GBP6Q6ZN66 633 aa11.17□□□□□ -0.62
COL13A1-207ENST00000478219 XAGE2Q96GT9 111 aa11.17□□□□□ -0.62
COL13A1-207ENST00000478219 DBNDD2Q9BQY9 259 aa11.17□□□□□ -0.62
COL13A1-207ENST00000478219 GOLGA6AQ9NYA3 693 aa11.17□□□□□ -0.62
COL13A1-207ENST00000478219 A0A1B0GTH6 734 aa11.17□□□□□ -0.62
COL13A1-207ENST00000478219 UBE2Q2LH0YL09 131 aa11.17□□□□□ -0.62
COL13A1-207ENST00000478219 GRM8O00222 908 aa11.17□□□□□ -0.62
COL13A1-207ENST00000478219 COBLO75128 1261 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms