RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 CDK5RAP2Q96SN8 1893 aa27.72■■■□□ 2.03
TRAF4-211ENST00000478021 ZBTB48P10074 688 aaPredicted RBP27.72■■■□□ 2.03
TRAF4-211ENST00000478021 SH3BP5LQ7L8J4 393 aa27.72■■■□□ 2.03
TRAF4-211ENST00000478021 SH3RF3Q8TEJ3 882 aaPredicted RBP27.72■■■□□ 2.03
TRAF4-211ENST00000478021 ZKSCAN4Q969J2 545 aaPredicted RBP27.72■■■□□ 2.03
TRAF4-211ENST00000478021 OPTNQ96CV9 577 aa27.72■■■□□ 2.03
TRAF4-211ENST00000478021 DNAJC2Q99543 621 aaKnown RBP27.72■■■□□ 2.03
TRAF4-211ENST00000478021 DDTLA6NHG4 134 aaPredicted RBP27.71■■■□□ 2.03
TRAF4-211ENST00000478021 CYP7A1P22680 504 aa27.71■■■□□ 2.03
TRAF4-211ENST00000478021 SREBF2Q12772 1141 aa27.71■■■□□ 2.03
TRAF4-211ENST00000478021 TEX11Q8IYF3 940 aa27.71■■■□□ 2.03
TRAF4-211ENST00000478021 TNS4Q8IZW8 715 aa27.71■■■□□ 2.03
TRAF4-211ENST00000478021 SAGE1Q9NXZ1 904 aa27.71■■■□□ 2.03
TRAF4-211ENST00000478021 CASP8AP2Q9UKL3 1982 aa27.71■■■□□ 2.03
TRAF4-211ENST00000478021 TM4SF4P48230 202 aa27.7■■■□□ 2.02
TRAF4-211ENST00000478021 SNCAIPQ9Y6H5 919 aa27.7■■■□□ 2.02
TRAF4-211ENST00000478021 MANSC4A6NHS7 340 aaPredicted RBP27.69■■■□□ 2.02
TRAF4-211ENST00000478021 BAG3O95817 575 aa27.69■■■□□ 2.02
TRAF4-211ENST00000478021 SLURP2P0DP57 97 aa27.69■■■□□ 2.02
TRAF4-211ENST00000478021 INPP5BP32019 993 aa27.69■■■□□ 2.02
TRAF4-211ENST00000478021 MAGEB6Q8N7X4 407 aa27.69■■■□□ 2.02
TRAF4-211ENST00000478021 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.69■■■□□ 2.02
TRAF4-211ENST00000478021 BOLA2Q9H3K6 86 aa27.69■■■□□ 2.02
TRAF4-211ENST00000478021 ATRNL1Q5VV63 1379 aa27.69■■■□□ 2.02
TRAF4-211ENST00000478021 GOLIM4O00461 696 aa27.68■■■□□ 2.02
TRAF4-211ENST00000478021 MAP4K4O95819 1239 aaPredicted RBP27.68■■■□□ 2.02
TRAF4-211ENST00000478021 MAP3K12Q12852 859 aa27.68■■■□□ 2.02
TRAF4-211ENST00000478021 EDC3Q96F86 508 aaKnown RBP27.68■■■□□ 2.02
TRAF4-211ENST00000478021 OTUD5Q96G74 571 aa27.68■■■□□ 2.02
TRAF4-211ENST00000478021 FOCADQ5VW36 1801 aa27.67■■■□□ 2.02
TRAF4-211ENST00000478021 CAPN15O75808 1086 aa27.67■■■□□ 2.02
TRAF4-211ENST00000478021 DYNLL1P63167 89 aaKnown RBP27.67■■■□□ 2.02
TRAF4-211ENST00000478021 IGSF3O75054 1194 aa27.66■■■□□ 2.02
TRAF4-211ENST00000478021 TTF1Q15361 905 aaPredicted RBP27.66■■■□□ 2.02
TRAF4-211ENST00000478021 MIGA1Q8NAN2 632 aa27.66■■■□□ 2.02
TRAF4-211ENST00000478021 OSBPL5Q9H0X9 879 aaPredicted RBP27.66■■■□□ 2.02
TRAF4-211ENST00000478021 ZNF112Q9UJU3 913 aa27.66■■■□□ 2.02
TRAF4-211ENST00000478021 TBC1D8O95759 1140 aa27.65■■■□□ 2.02
TRAF4-211ENST00000478021 PLCG2P16885 1265 aa27.65■■■□□ 2.02
TRAF4-211ENST00000478021 ATP5JP18859 108 aa27.65■■■□□ 2.02
TRAF4-211ENST00000478021 PPP4CP60510 307 aa27.65■■■□□ 2.02
TRAF4-211ENST00000478021 SPDYE5A6NIY4 337 aa27.64■■■□□ 2.02
TRAF4-211ENST00000478021 NPM3O75607 178 aaKnown RBP27.64■■■□□ 2.02
TRAF4-211ENST00000478021 MAPKAPK5Q8IW41 473 aa27.64■■■□□ 2.02
TRAF4-211ENST00000478021 TGFBRAP1Q8WUH2 860 aa27.64■■■□□ 2.02
TRAF4-211ENST00000478021 SUPT16HQ9Y5B9 1047 aaKnown RBP27.64■■■□□ 2.02
TRAF4-211ENST00000478021 IGF2BP3O00425 579 aaKnown RBP eCLIP27.63■■■□□ 2.01
TRAF4-211ENST00000478021 ERO1BQ86YB8 467 aa27.63■■■□□ 2.01
TRAF4-211ENST00000478021 IFNL1Q8IU54 200 aa27.63■■■□□ 2.01
TRAF4-211ENST00000478021 PAG1Q9NWQ8 432 aa27.63■■■□□ 2.01
TRAF4-211ENST00000478021 COL2A1P02458 1487 aaPredicted RBP27.63■■■□□ 2.01
TRAF4-211ENST00000478021 FAM196BA6NMK8 535 aa27.62■■■□□ 2.01
TRAF4-211ENST00000478021 INHBEP58166 350 aa27.62■■■□□ 2.01
TRAF4-211ENST00000478021 SIPA1L1O43166 1804 aa27.62■■■□□ 2.01
TRAF4-211ENST00000478021 PDE6AP16499 860 aa27.61■■■□□ 2.01
TRAF4-211ENST00000478021 SLC9C2Q5TAH2 1124 aa27.61■■■□□ 2.01
TRAF4-211ENST00000478021 TSHZ3Q63HK5 1081 aa27.61■■■□□ 2.01
TRAF4-211ENST00000478021 MS4A4AQ96JQ5 239 aa27.61■■■□□ 2.01
TRAF4-211ENST00000478021 HAUS7Q99871 368 aa27.61■■■□□ 2.01
TRAF4-211ENST00000478021 FLT1P17948 1338 aa27.61■■■□□ 2.01
TRAF4-211ENST00000478021 DOCK1Q14185 1865 aa27.6■■■□□ 2.01
TRAF4-211ENST00000478021 PHF20L1A8MW92 1017 aa27.6■■■□□ 2.01
TRAF4-211ENST00000478021 NOL9Q5SY16 702 aaKnown RBP27.6■■■□□ 2.01
TRAF4-211ENST00000478021 EXOC6Q8TAG9 804 aa27.6■■■□□ 2.01
TRAF4-211ENST00000478021 PTPN18Q99952 460 aa27.6■■■□□ 2.01
TRAF4-211ENST00000478021 ECHDC1Q9NTX5 307 aa27.6■■■□□ 2.01
TRAF4-211ENST00000478021 MYH7P12883 1935 aa27.6■■■□□ 2.01
TRAF4-211ENST00000478021 MYH1P12882 1939 aa27.59■■■□□ 2.01
TRAF4-211ENST00000478021 IRF6O14896 467 aa27.59■■■□□ 2.01
TRAF4-211ENST00000478021 GTF2A2P52657 109 aa27.59■■■□□ 2.01
TRAF4-211ENST00000478021 MAP3K10Q02779 954 aa27.59■■■□□ 2.01
TRAF4-211ENST00000478021 BRI3BPQ8WY22 251 aa27.59■■■□□ 2.01
TRAF4-211ENST00000478021 R3HDMLQ9H3Y0 253 aa27.59■■■□□ 2.01
TRAF4-211ENST00000478021 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.59■■■□□ 2.01
TRAF4-211ENST00000478021 SAP30BPQ9UHR5 308 aaKnown RBP27.59■■■□□ 2.01
TRAF4-211ENST00000478021 ZNF532Q9HCE3 1301 aa27.59■■■□□ 2.01
TRAF4-211ENST00000478021 CCL15-CCL14A0A0B4J2E2 113 aa27.58■■■□□ 2.01
TRAF4-211ENST00000478021 TESPA1A2RU30 521 aaPredicted RBP27.58■■■□□ 2.01
TRAF4-211ENST00000478021 PPIL2Q13356 520 aa27.58■■■□□ 2.01
TRAF4-211ENST00000478021 CCL15Q16663 113 aa27.58■■■□□ 2.01
TRAF4-211ENST00000478021 ALDH1A1P00352 501 aa27.57■■■□□ 2
TRAF4-211ENST00000478021 PPATQ06203 517 aa27.57■■■□□ 2
TRAF4-211ENST00000478021 SLC4A8Q2Y0W8 1093 aa27.57■■■□□ 2
TRAF4-211ENST00000478021 SLFNL1Q499Z3 407 aa27.57■■■□□ 2
TRAF4-211ENST00000478021 GPATCH3Q96I76 525 aa27.57■■■□□ 2
TRAF4-211ENST00000478021 PALD1Q9ULE6 856 aa27.57■■■□□ 2
TRAF4-211ENST00000478021 ATAD5Q96QE3 1844 aa27.56■■■□□ 2
TRAF4-211ENST00000478021 MAGEB6P1A0A0J9YX57 407 aa27.56■■■□□ 2
TRAF4-211ENST00000478021 USP5P45974 858 aa27.56■■■□□ 2
TRAF4-211ENST00000478021 TMED8Q6PL24 325 aaPredicted RBP27.56■■■□□ 2
TRAF4-211ENST00000478021 SCYL3Q8IZE3 742 aa27.56■■■□□ 2
TRAF4-211ENST00000478021 RIOK1Q9BRS2 568 aaKnown RBP27.56■■■□□ 2
TRAF4-211ENST00000478021 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.56■■■□□ 2
TRAF4-211ENST00000478021 TCRBV5S4A2TA0A5A2 114 aa27.55■■■□□ 2
TRAF4-211ENST00000478021 TBC1D12O60347 775 aa27.55■■■□□ 2
TRAF4-211ENST00000478021 HDAC1Q13547 482 aaPredicted RBP27.55■■■□□ 2
TRAF4-211ENST00000478021 OTUD7BQ6GQQ9 843 aa27.55■■■□□ 2
TRAF4-211ENST00000478021 CERS3Q8IU89 383 aa27.55■■■□□ 2
TRAF4-211ENST00000478021 OTUD7AQ8TE49 926 aaPredicted RBP27.55■■■□□ 2
TRAF4-211ENST00000478021 CHGBP05060 677 aa27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms