RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 LOC285556D6RIA3 1793 aa14.34□□□□□ -0.11
PRPF39-203ENST00000477626 F13A1P00488 732 aa14.34□□□□□ -0.11
PRPF39-203ENST00000477626 CDC27P30260 824 aa14.34□□□□□ -0.11
PRPF39-203ENST00000477626 GABPAQ06546 454 aa14.34□□□□□ -0.11
PRPF39-203ENST00000477626 NBR1Q14596 966 aa14.34□□□□□ -0.11
PRPF39-203ENST00000477626 DACT2Q5SW24 774 aa14.34□□□□□ -0.11
PRPF39-203ENST00000477626 C12orf60Q5U649 245 aa14.34□□□□□ -0.11
PRPF39-203ENST00000477626 NSFL1CQ9UNZ2 370 aaKnown RBP14.34□□□□□ -0.11
PRPF39-203ENST00000477626 CDC37L1Q7L3B6 337 aa14.33□□□□□ -0.11
PRPF39-203ENST00000477626 C2CD5Q86YS7 1000 aa14.33□□□□□ -0.11
PRPF39-203ENST00000477626 TMEM87BQ96K49 555 aa14.33□□□□□ -0.11
PRPF39-203ENST00000477626 DIXDC1Q155Q3 683 aa14.33□□□□□ -0.12
PRPF39-203ENST00000477626 ANGEL1Q9UNK9 670 aaKnown RBP14.33□□□□□ -0.12
PRPF39-203ENST00000477626 CYP2D7A0A087X1C5 515 aa14.33□□□□□ -0.12
PRPF39-203ENST00000477626 APOA5Q6Q788 366 aa14.33□□□□□ -0.12
PRPF39-203ENST00000477626 NOL8Q76FK4 1167 aaKnown RBP14.33□□□□□ -0.12
PRPF39-203ENST00000477626 GMLQ99445 158 aa14.33□□□□□ -0.12
PRPF39-203ENST00000477626 PSMD1Q99460 953 aa14.33□□□□□ -0.12
PRPF39-203ENST00000477626 B4E1Z4 1266 aa14.32□□□□□ -0.12
PRPF39-203ENST00000477626 NT5C2P49902 561 aa14.32□□□□□ -0.12
PRPF39-203ENST00000477626 METTL16Q86W50 562 aaKnown RBP14.32□□□□□ -0.12
PRPF39-203ENST00000477626 AATFQ9NY61 560 aaKnown RBP eCLIP14.32□□□□□ -0.122e-7■■■■■ 32.8
PRPF39-203ENST00000477626 SPTY2D1Q68D10 685 aaPredicted RBP14.32□□□□□ -0.12
PRPF39-203ENST00000477626 IL17RBQ9NRM6 502 aa14.32□□□□□ -0.12
PRPF39-203ENST00000477626 WDR33Q9C0J8 1336 aaKnown RBP14.32□□□□□ -0.12
PRPF39-203ENST00000477626 KIAA2012Q0VF49 1180 aa14.32□□□□□ -0.12
PRPF39-203ENST00000477626 APOBEC3HQ6NTF7 200 aaKnown RBP14.32□□□□□ -0.12
PRPF39-203ENST00000477626 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.32□□□□□ -0.12
PRPF39-203ENST00000477626 CNNM2Q9H8M5 875 aa14.32□□□□□ -0.12
PRPF39-203ENST00000477626 TCP11L1Q9NUJ3 509 aa14.32□□□□□ -0.12
PRPF39-203ENST00000477626 DAGLAQ9Y4D2 1042 aa14.32□□□□□ -0.12
PRPF39-203ENST00000477626 STK36Q9NRP7 1315 aa14.32□□□□□ -0.12
PRPF39-203ENST00000477626 IGKV6D-41A0A0C4DH26 115 aa14.31□□□□□ -0.12
PRPF39-203ENST00000477626 CYP2D6P10635 497 aa14.31□□□□□ -0.12
PRPF39-203ENST00000477626 KCNJ4P48050 445 aa14.31□□□□□ -0.12
PRPF39-203ENST00000477626 MPNDQ8N594 471 aa14.31□□□□□ -0.12
PRPF39-203ENST00000477626 RAI14Q9P0K7 980 aa14.31□□□□□ -0.12
PRPF39-203ENST00000477626 ABCF2Q9UG63 623 aa14.31□□□□□ -0.12
PRPF39-203ENST00000477626 FLT1P17948 1338 aa14.31□□□□□ -0.12
PRPF39-203ENST00000477626 ATRNL1Q5VV63 1379 aa14.31□□□□□ -0.12
PRPF39-203ENST00000477626 DDX11L8A8MPP1 907 aa14.31□□□□□ -0.12
PRPF39-203ENST00000477626 WDHD1O75717 1129 aaPredicted RBP14.31□□□□□ -0.12
PRPF39-203ENST00000477626 NCOA5Q9HCD5 579 aaKnown RBP14.31□□□□□ -0.12
PRPF39-203ENST00000477626 PGAP2Q9UHJ9 254 aa14.31□□□□□ -0.12
PRPF39-203ENST00000477626 LDHBP07195 334 aaKnown RBP14.31□□□□□ -0.12
PRPF39-203ENST00000477626 PDIA4P13667 645 aaKnown RBP14.31□□□□□ -0.12
PRPF39-203ENST00000477626 ENAHQ8N8S7 591 aaPredicted RBP14.31□□□□□ -0.12
PRPF39-203ENST00000477626 TBC1D22AQ8WUA7 517 aa14.31□□□□□ -0.12
PRPF39-203ENST00000477626 ARPP21Q9UBL0 812 aaPredicted RBP14.31□□□□□ -0.12
PRPF39-203ENST00000477626 JAG2Q9Y219 1238 aa14.31□□□□□ -0.12
PRPF39-203ENST00000477626 ZBED3Q96IU2 234 aaPredicted RBP14.3□□□□□ -0.12
PRPF39-203ENST00000477626 NAPBQ9H115 298 aa14.3□□□□□ -0.12
PRPF39-203ENST00000477626 PRELPP51888 382 aa14.3□□□□□ -0.12
PRPF39-203ENST00000477626 SLC35G1Q2M3R5 365 aa14.3□□□□□ -0.12
PRPF39-203ENST00000477626 HHIPL2Q6UWX4 724 aa14.3□□□□□ -0.12
PRPF39-203ENST00000477626 KRT23Q9C075 422 aa14.3□□□□□ -0.12
PRPF39-203ENST00000477626 NPM3O75607 178 aaKnown RBP14.29□□□□□ -0.12
PRPF39-203ENST00000477626 TROAPQ12815 778 aa14.29□□□□□ -0.12
PRPF39-203ENST00000477626 KLHL40Q2TBA0 621 aa14.29□□□□□ -0.12
PRPF39-203ENST00000477626 MXD3Q9BW11 206 aa14.29□□□□□ -0.12
PRPF39-203ENST00000477626 DDX4Q9NQI0 724 aaKnown RBP14.29□□□□□ -0.12
PRPF39-203ENST00000477626 ELP1O95163 1332 aa14.29□□□□□ -0.12
PRPF39-203ENST00000477626 PTPDC1A2A3K4 754 aa14.29□□□□□ -0.12
PRPF39-203ENST00000477626 C16orf86Q6ZW13 317 aa14.29□□□□□ -0.12
PRPF39-203ENST00000477626 VPS33BQ9H267 617 aa14.29□□□□□ -0.12
PRPF39-203ENST00000477626 PLCD1P51178 756 aa14.29□□□□□ -0.12
PRPF39-203ENST00000477626 PODNQ7Z5L7 613 aa14.29□□□□□ -0.12
PRPF39-203ENST00000477626 CERS3Q8IU89 383 aa14.29□□□□□ -0.12
PRPF39-203ENST00000477626 H0YIN7 160 aa14.28□□□□□ -0.12
PRPF39-203ENST00000477626 TRAK2O60296 914 aa14.28□□□□□ -0.12
PRPF39-203ENST00000477626 STRIP1Q5VSL9 837 aa14.28□□□□□ -0.12
PRPF39-203ENST00000477626 VPS37DQ86XT2 251 aa14.28□□□□□ -0.12
PRPF39-203ENST00000477626 ZDHHC15Q96MV8 337 aa14.28□□□□□ -0.12
PRPF39-203ENST00000477626 WDR90Q96KV7 1748 aa14.28□□□□□ -0.12
PRPF39-203ENST00000477626 KDM4AO75164 1064 aa14.28□□□□□ -0.12
PRPF39-203ENST00000477626 GRIPAP1Q4V328 841 aa14.28□□□□□ -0.12
PRPF39-203ENST00000477626 USP17L12C9JPN9 530 aa14.28□□□□□ -0.12
PRPF39-203ENST00000477626 USP17L21D6R901 530 aa14.28□□□□□ -0.12
PRPF39-203ENST00000477626 USP17L8P0C7I0 530 aa14.28□□□□□ -0.12
PRPF39-203ENST00000477626 NPY5RQ15761 445 aa14.28□□□□□ -0.12
PRPF39-203ENST00000477626 MFSD14BQ5SR56 506 aa14.28□□□□□ -0.12
PRPF39-203ENST00000477626 DPP8Q6V1X1 898 aaPredicted RBP14.28□□□□□ -0.12
PRPF39-203ENST00000477626 CNKSR1Q969H4 720 aa14.28□□□□□ -0.12
PRPF39-203ENST00000477626 SMC3Q9UQE7 1217 aa14.28□□□□□ -0.12
PRPF39-203ENST00000477626 RBBP6Q7Z6E9 1792 aaKnown RBP14.27□□□□□ -0.12
PRPF39-203ENST00000477626 UBE2Q2LH0YL09 131 aa14.27□□□□□ -0.12
PRPF39-203ENST00000477626 GSTO1P78417 241 aa14.27□□□□□ -0.12
PRPF39-203ENST00000477626 HDLBPQ00341 1268 aaKnown RBP14.27□□□□□ -0.12
PRPF39-203ENST00000477626 BTDP43251 543 aa14.27□□□□□ -0.13
PRPF39-203ENST00000477626 RLFQ13129 1914 aa14.27□□□□□ -0.13
PRPF39-203ENST00000477626 PKN1Q16512 942 aa14.27□□□□□ -0.13
PRPF39-203ENST00000477626 CC2D2BQ6DHV5 1058 aa14.27□□□□□ -0.13
PRPF39-203ENST00000477626 MFSD6Q6ZSS7 791 aa14.27□□□□□ -0.13
PRPF39-203ENST00000477626 GBP4Q96PP9 640 aa14.27□□□□□ -0.13
PRPF39-203ENST00000477626 PCDHAC2Q9Y5I4 1007 aa14.27□□□□□ -0.13
PRPF39-203ENST00000477626 MYO3BQ8WXR4 1341 aa14.26□□□□□ -0.13
PRPF39-203ENST00000477626 KLF18A0A0U1RQI7 1052 aa14.26□□□□□ -0.13
PRPF39-203ENST00000477626 DPEP1P16444 411 aa14.26□□□□□ -0.13
PRPF39-203ENST00000477626 TGFB2P61812 414 aa14.26□□□□□ -0.13
PRPF39-203ENST00000477626 CHAF1AQ13111 956 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms