RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 TFRCP02786 760 aaKnown RBP14.29□□□□□ -0.12
BRCA1-213ENST00000476777 CAPN2P17655 700 aa14.29□□□□□ -0.12
BRCA1-213ENST00000476777 PUM3Q15397 648 aaKnown RBP14.29□□□□□ -0.12
BRCA1-213ENST00000476777 DIXDC1Q155Q3 683 aa14.29□□□□□ -0.12
BRCA1-213ENST00000476777 PRRT2Q7Z6L0 340 aaPredicted RBP14.29□□□□□ -0.12
BRCA1-213ENST00000476777 KLHDC4Q8TBB5 520 aa14.29□□□□□ -0.12
BRCA1-213ENST00000476777 WDR66Q8TBY9 1149 aa14.29□□□□□ -0.12
BRCA1-213ENST00000476777 DEFB118Q96PH6 123 aa14.29□□□□□ -0.12
BRCA1-213ENST00000476777 CRISPLD2Q9H0B8 497 aa14.29□□□□□ -0.12
BRCA1-213ENST00000476777 PAK6Q9NQU5 681 aaPredicted RBP14.29□□□□□ -0.12
BRCA1-213ENST00000476777 IFIT1P09914 478 aaKnown RBP14.28□□□□□ -0.12
BRCA1-213ENST00000476777 IRF5Q13568 498 aa14.28□□□□□ -0.12
BRCA1-213ENST00000476777 ATRNL1Q5VV63 1379 aa14.28□□□□□ -0.12
BRCA1-213ENST00000476777 FASTKD5Q7L8L6 764 aaKnown RBP14.28□□□□□ -0.12
BRCA1-213ENST00000476777 ZFPM1Q8IX07 1006 aa14.28□□□□□ -0.12
BRCA1-213ENST00000476777 ALPK3Q96L96 1907 aa14.28□□□□□ -0.12
BRCA1-213ENST00000476777 SALL2Q9Y467 1007 aaPredicted RBP14.28□□□□□ -0.12
BRCA1-213ENST00000476777 ZHX2Q9Y6X8 837 aa14.28□□□□□ -0.12
BRCA1-213ENST00000476777 PTPRAP18433 802 aa14.27□□□□□ -0.13
BRCA1-213ENST00000476777 SCYL3Q8IZE3 742 aa14.27□□□□□ -0.13
BRCA1-213ENST00000476777 PAWRQ96IZ0 340 aaKnown RBP14.27□□□□□ -0.13
BRCA1-213ENST00000476777 USP40Q9NVE5 1235 aa14.27□□□□□ -0.13
BRCA1-213ENST00000476777 SLC45A1Q9Y2W3 748 aa14.27□□□□□ -0.13
BRCA1-213ENST00000476777 AFG3L2Q9Y4W6 797 aa14.27□□□□□ -0.13
BRCA1-213ENST00000476777 DNAH12Q6ZR08 3092 aa14.26□□□□□ -0.13
BRCA1-213ENST00000476777 PTPRFP10586 1907 aa14.26□□□□□ -0.13
BRCA1-213ENST00000476777 TNPO2O14787 897 aaKnown RBP14.26□□□□□ -0.13
BRCA1-213ENST00000476777 PRDX5P30044 214 aa14.26□□□□□ -0.13
BRCA1-213ENST00000476777 DIS3LQ8TF46 1054 aaKnown RBP14.26□□□□□ -0.13
BRCA1-213ENST00000476777 GDF15Q99988 308 aa14.26□□□□□ -0.13
BRCA1-213ENST00000476777 TTC28Q96AY4 2481 aa14.26□□□□□ -0.13
BRCA1-213ENST00000476777 VCANP13611 3396 aa14.26□□□□□ -0.13
BRCA1-213ENST00000476777 MYH13Q9UKX3 1938 aa14.25□□□□□ -0.13
BRCA1-213ENST00000476777 BMP8BP34820 402 aa14.25□□□□□ -0.13
BRCA1-213ENST00000476777 MNX1P50219 401 aaPredicted RBP14.25□□□□□ -0.13
BRCA1-213ENST00000476777 GPR153Q6NV75 609 aa14.25□□□□□ -0.13
BRCA1-213ENST00000476777 GADL1Q6ZQY3 521 aa14.25□□□□□ -0.13
BRCA1-213ENST00000476777 LPIN2Q92539 896 aa14.25□□□□□ -0.13
BRCA1-213ENST00000476777 PICK1Q9NRD5 415 aa14.25□□□□□ -0.13
BRCA1-213ENST00000476777 EYA2O00167 538 aa14.24□□□□□ -0.13
BRCA1-213ENST00000476777 LDHBP07195 334 aaKnown RBP14.24□□□□□ -0.13
BRCA1-213ENST00000476777 SLC5A1P13866 664 aa14.24□□□□□ -0.13
BRCA1-213ENST00000476777 ZEB1P37275 1124 aaPredicted RBP14.24□□□□□ -0.13
BRCA1-213ENST00000476777 RFX5P48382 616 aaPredicted RBP14.24□□□□□ -0.13
BRCA1-213ENST00000476777 RGS3P49796 1198 aa14.24□□□□□ -0.13
BRCA1-213ENST00000476777 MAP3K10Q02779 954 aa14.24□□□□□ -0.13
BRCA1-213ENST00000476777 SH3BP5LQ7L8J4 393 aa14.24□□□□□ -0.13
BRCA1-213ENST00000476777 NECAB2Q7Z6G3 386 aa14.24□□□□□ -0.13
BRCA1-213ENST00000476777 SMCR8Q8TEV9 937 aaPredicted RBP14.24□□□□□ -0.13
BRCA1-213ENST00000476777 IDI2Q9BXS1 227 aa14.24□□□□□ -0.13
BRCA1-213ENST00000476777 ENTPD3O75355 529 aa14.23□□□□□ -0.13
BRCA1-213ENST00000476777 SLURP2P0DP57 97 aa14.23□□□□□ -0.13
BRCA1-213ENST00000476777 DEFB123Q8N688 67 aa14.23□□□□□ -0.13
BRCA1-213ENST00000476777 ANKRD13CQ8N6S4 541 aa14.23□□□□□ -0.13
BRCA1-213ENST00000476777 COA7Q96BR5 231 aa14.23□□□□□ -0.13
BRCA1-213ENST00000476777 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.23□□□□□ -0.13
BRCA1-213ENST00000476777 USP44Q9H0E7 712 aa14.23□□□□□ -0.13
BRCA1-213ENST00000476777 TAOK2Q9UL54 1235 aa14.23□□□□□ -0.13
BRCA1-213ENST00000476777 ZMYND8Q9ULU4 1186 aaPredicted RBP14.23□□□□□ -0.13
BRCA1-213ENST00000476777 SALL1Q9NSC2 1324 aa14.22□□□□□ -0.13
BRCA1-213ENST00000476777 TRIM75PA6NK02 468 aa14.22□□□□□ -0.13
BRCA1-213ENST00000476777 CTNND1O60716 968 aaKnown RBP14.22□□□□□ -0.13
BRCA1-213ENST00000476777 FAM110CQ1W6H9 321 aa14.22□□□□□ -0.13
BRCA1-213ENST00000476777 ATG9AQ7Z3C6 839 aa14.22□□□□□ -0.13
BRCA1-213ENST00000476777 C7orf61Q8IZ16 206 aa14.22□□□□□ -0.13
BRCA1-213ENST00000476777 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.22□□□□□ -0.13
BRCA1-213ENST00000476777 AGTPBP1Q9UPW5 1226 aa14.22□□□□□ -0.13
BRCA1-213ENST00000476777 LRRFIP2Q9Y608 721 aaKnown RBP14.22□□□□□ -0.13
BRCA1-213ENST00000476777 PRUNE2Q8WUY3 3088 aa14.22□□□□□ -0.13
BRCA1-213ENST00000476777 PHIPQ8WWQ0 1821 aa14.22□□□□□ -0.13
BRCA1-213ENST00000476777 DOCK2Q92608 1830 aa14.22□□□□□ -0.13
BRCA1-213ENST00000476777 RFX7Q2KHR2 1363 aa14.22□□□□□ -0.13
BRCA1-213ENST00000476777 MYH2Q9UKX2 1941 aa14.21□□□□□ -0.13
BRCA1-213ENST00000476777 DDTLA6NHG4 134 aaPredicted RBP14.21□□□□□ -0.13
BRCA1-213ENST00000476777 LRIT3Q3SXY7 679 aa14.21□□□□□ -0.13
BRCA1-213ENST00000476777 TREML2Q5T2D2 321 aa14.21□□□□□ -0.13
BRCA1-213ENST00000476777 Q7L0L9 218 aa14.21□□□□□ -0.13
BRCA1-213ENST00000476777 ANKLE1Q8NAG6 615 aa14.21□□□□□ -0.13
BRCA1-213ENST00000476777 GNL3LQ9NVN8 582 aaKnown RBP14.21□□□□□ -0.13
BRCA1-213ENST00000476777 GAKO14976 1311 aa14.2□□□□□ -0.14
BRCA1-213ENST00000476777 HMGCRP04035 888 aa14.2□□□□□ -0.14
BRCA1-213ENST00000476777 CCDC84Q86UT8 332 aaPredicted RBP14.2□□□□□ -0.14
BRCA1-213ENST00000476777 ZSCAN29Q8IWY8 852 aaPredicted RBP14.2□□□□□ -0.14
BRCA1-213ENST00000476777 NBPF3Q9H094 633 aa14.2□□□□□ -0.14
BRCA1-213ENST00000476777 DDX4Q9NQI0 724 aaKnown RBP14.2□□□□□ -0.14
BRCA1-213ENST00000476777 STXBP5LQ9Y2K9 1186 aa14.2□□□□□ -0.14
BRCA1-213ENST00000476777 DOCK1Q14185 1865 aa14.2□□□□□ -0.14
BRCA1-213ENST00000476777 SEMA3EO15041 775 aa14.19□□□□□ -0.14
BRCA1-213ENST00000476777 MAGEA10P43363 369 aaPredicted RBP14.19□□□□□ -0.14
BRCA1-213ENST00000476777 PHKA1P46020 1223 aa14.19□□□□□ -0.14
BRCA1-213ENST00000476777 ATP2B3Q16720 1220 aa14.19□□□□□ -0.14
BRCA1-213ENST00000476777 MRPL50Q8N5N7 158 aaKnown RBP14.19□□□□□ -0.14
BRCA1-213ENST00000476777 MRS2Q9HD23 443 aa14.19□□□□□ -0.14
BRCA1-213ENST00000476777 MTMR10Q9NXD2 777 aa14.19□□□□□ -0.14
BRCA1-213ENST00000476777 GJD2Q9UKL4 321 aa14.19□□□□□ -0.14
BRCA1-213ENST00000476777 PNMA3Q9UL41 463 aa14.19□□□□□ -0.14
BRCA1-213ENST00000476777 DENND2AQ9ULE3 1009 aa14.19□□□□□ -0.14
BRCA1-213ENST00000476777 EYSQ5T1H1 3165 aa14.19□□□□□ -0.14
BRCA1-213ENST00000476777 RPTORQ8N122 1335 aa14.18□□□□□ -0.14
BRCA1-213ENST00000476777 ZBTB22O15209 634 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms