RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 B4GALNT3Q6L9W6 998 aa18.24■□□□□ 0.51
DFFA-203ENST00000476658 OTUD7AQ8TE49 926 aaPredicted RBP18.24■□□□□ 0.51
DFFA-203ENST00000476658 SLC10A4Q96EP9 437 aa18.24■□□□□ 0.51
DFFA-203ENST00000476658 PDE6AP16499 860 aa18.23■□□□□ 0.51
DFFA-203ENST00000476658 DYNLL1P63167 89 aaKnown RBP18.23■□□□□ 0.51
DFFA-203ENST00000476658 TMED8Q6PL24 325 aaPredicted RBP18.23■□□□□ 0.51
DFFA-203ENST00000476658 MIGA2Q7L4E1 593 aa18.23■□□□□ 0.51
DFFA-203ENST00000476658 SMC5Q8IY18 1101 aa18.23■□□□□ 0.51
DFFA-203ENST00000476658 ANKRD13AQ8IZ07 590 aa18.23■□□□□ 0.51
DFFA-203ENST00000476658 CLMNQ96JQ2 1002 aa18.23■□□□□ 0.51
DFFA-203ENST00000476658 CSRNP1Q96S65 589 aa18.23■□□□□ 0.51
DFFA-203ENST00000476658 ZIC5Q96T25 663 aa18.23■□□□□ 0.51
DFFA-203ENST00000476658 TTC41PQ6P2S7 1318 aa18.23■□□□□ 0.51
DFFA-203ENST00000476658 MYH1P12882 1939 aa18.22■□□□□ 0.51
DFFA-203ENST00000476658 ERC2O15083 957 aa18.22■□□□□ 0.51
DFFA-203ENST00000476658 MX1P20591 662 aa18.22■□□□□ 0.51
DFFA-203ENST00000476658 MKRN3Q13064 507 aaKnown RBP18.22■□□□□ 0.51
DFFA-203ENST00000476658 AIDAQ96BJ3 306 aa18.22■□□□□ 0.51
DFFA-203ENST00000476658 BEGAINQ9BUH8 593 aa18.22■□□□□ 0.51
DFFA-203ENST00000476658 ZNF341Q9BYN7 854 aa18.22■□□□□ 0.51
DFFA-203ENST00000476658 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.22■□□□□ 0.51
DFFA-203ENST00000476658 ZNF532Q9HCE3 1301 aa18.22■□□□□ 0.51
DFFA-203ENST00000476658 UNCXA6NJT0 531 aa18.21■□□□□ 0.51
DFFA-203ENST00000476658 NPM3O75607 178 aaKnown RBP18.21■□□□□ 0.51
DFFA-203ENST00000476658 MAP3K9P80192 1104 aa18.21■□□□□ 0.51
DFFA-203ENST00000476658 KIF23Q02241 960 aaPredicted RBP18.21■□□□□ 0.51
DFFA-203ENST00000476658 SH3BP5LQ7L8J4 393 aa18.21■□□□□ 0.51
DFFA-203ENST00000476658 CERS3Q8IU89 383 aa18.21■□□□□ 0.51
DFFA-203ENST00000476658 TGFBRAP1Q8WUH2 860 aa18.21■□□□□ 0.51
DFFA-203ENST00000476658 WRNIP1Q96S55 665 aa18.21■□□□□ 0.51
DFFA-203ENST00000476658 LNPKQ9C0E8 428 aa18.21■□□□□ 0.51
DFFA-203ENST00000476658 OSBPL5Q9H0X9 879 aaPredicted RBP18.21■□□□□ 0.51
DFFA-203ENST00000476658 CSADQ9Y600 493 aa18.21■□□□□ 0.51
DFFA-203ENST00000476658 MAGEB6P1A0A0J9YX57 407 aa18.2■□□□□ 0.5
DFFA-203ENST00000476658 DDTLA6NHG4 134 aaPredicted RBP18.2■□□□□ 0.5
DFFA-203ENST00000476658 MAPKAPK5Q8IW41 473 aa18.2■□□□□ 0.5
DFFA-203ENST00000476658 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.2■□□□□ 0.5
DFFA-203ENST00000476658 ELP3Q9H9T3 547 aa18.2■□□□□ 0.5
DFFA-203ENST00000476658 WBP1LQ9NX94 342 aa18.2■□□□□ 0.5
DFFA-203ENST00000476658 GLRX3O76003 335 aaKnown RBP18.19■□□□□ 0.5
DFFA-203ENST00000476658 ADD2P35612 726 aa18.19■□□□□ 0.5
DFFA-203ENST00000476658 USP5P45974 858 aa18.19■□□□□ 0.5
DFFA-203ENST00000476658 VGLL4Q14135 290 aa18.19■□□□□ 0.5
DFFA-203ENST00000476658 SPRYD7Q5W111 196 aa18.19■□□□□ 0.5
DFFA-203ENST00000476658 ZSCAN25Q6NSZ9 544 aa18.19■□□□□ 0.5
DFFA-203ENST00000476658 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.19■□□□□ 0.5
DFFA-203ENST00000476658 PI4K2BQ8TCG2 481 aa18.19■□□□□ 0.5
DFFA-203ENST00000476658 ATRNL1Q5VV63 1379 aa18.18■□□□□ 0.5
DFFA-203ENST00000476658 TCRBV5S4A2TA0A5A2 114 aa18.18■□□□□ 0.5
DFFA-203ENST00000476658 SLFNL1Q499Z3 407 aa18.18■□□□□ 0.5
DFFA-203ENST00000476658 CHD1LQ86WJ1 897 aa18.18■□□□□ 0.5
DFFA-203ENST00000476658 ZKSCAN4Q969J2 545 aaPredicted RBP18.18■□□□□ 0.5
DFFA-203ENST00000476658 WNK4Q96J92 1243 aa18.18■□□□□ 0.5
DFFA-203ENST00000476658 COL2A1P02458 1487 aaPredicted RBP18.18■□□□□ 0.5
DFFA-203ENST00000476658 FLT1P17948 1338 aa18.18■□□□□ 0.5
DFFA-203ENST00000476658 SALL3Q9BXA9 1300 aa18.18■□□□□ 0.5
DFFA-203ENST00000476658 NAV1Q8NEY1 1877 aa18.18■□□□□ 0.5
DFFA-203ENST00000476658 FOXN1O15353 648 aa18.17■□□□□ 0.5
DFFA-203ENST00000476658 NUCB1Q02818 461 aa18.17■□□□□ 0.5
DFFA-203ENST00000476658 KBTBD3Q8NAB2 608 aa18.17■□□□□ 0.5
DFFA-203ENST00000476658 OPTNQ96CV9 577 aa18.17■□□□□ 0.5
DFFA-203ENST00000476658 RIOK1Q9BRS2 568 aaKnown RBP18.17■□□□□ 0.5
DFFA-203ENST00000476658 ZBTB48P10074 688 aaPredicted RBP18.16■□□□□ 0.5
DFFA-203ENST00000476658 INPP5BP32019 993 aa18.16■□□□□ 0.5
DFFA-203ENST00000476658 PDE1AP54750 535 aa18.16■□□□□ 0.5
DFFA-203ENST00000476658 UBE3CQ15386 1083 aa18.16■□□□□ 0.5
DFFA-203ENST00000476658 REM2Q8IYK8 340 aaPredicted RBP18.16■□□□□ 0.5
DFFA-203ENST00000476658 CRNKL1Q9BZJ0 848 aaKnown RBP18.16■□□□□ 0.5
DFFA-203ENST00000476658 DHX36Q9H2U1 1008 aaKnown RBP18.16■□□□□ 0.5
DFFA-203ENST00000476658 SAP30BPQ9UHR5 308 aaKnown RBP18.16■□□□□ 0.5
DFFA-203ENST00000476658 SNCAIPQ9Y6H5 919 aa18.16■□□□□ 0.5
DFFA-203ENST00000476658 SIPA1L1O43166 1804 aa18.16■□□□□ 0.5
DFFA-203ENST00000476658 LAMB1P07942 1786 aa18.15■□□□□ 0.5
DFFA-203ENST00000476658 MBD4O95243 580 aa18.15■□□□□ 0.5
DFFA-203ENST00000476658 CHGBP05060 677 aa18.15■□□□□ 0.5
DFFA-203ENST00000476658 SLURP2P0DP57 97 aa18.15■□□□□ 0.5
DFFA-203ENST00000476658 SLC4A8Q2Y0W8 1093 aa18.15■□□□□ 0.5
DFFA-203ENST00000476658 LCORLQ8N3X6 602 aa18.15■□□□□ 0.5
DFFA-203ENST00000476658 CNKSR2Q8WXI2 1034 aa18.15■□□□□ 0.5
DFFA-203ENST00000476658 ARMT1Q9H993 441 aa18.15■□□□□ 0.5
DFFA-203ENST00000476658 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.15■□□□□ 0.5
DFFA-203ENST00000476658 STAP2Q9UGK3 403 aa18.15■□□□□ 0.5
DFFA-203ENST00000476658 ZNF112Q9UJU3 913 aa18.15■□□□□ 0.5
DFFA-203ENST00000476658 PALD1Q9ULE6 856 aa18.15■□□□□ 0.5
DFFA-203ENST00000476658 ATAD5Q96QE3 1844 aa18.14■□□□□ 0.5
DFFA-203ENST00000476658 DOCK1Q14185 1865 aa18.14■□□□□ 0.49
DFFA-203ENST00000476658 BAZ2AQ9UIF9 1905 aaKnown RBP18.14■□□□□ 0.49
DFFA-203ENST00000476658 FAM196BA6NMK8 535 aa18.14■□□□□ 0.49
DFFA-203ENST00000476658 HLA-DOAP06340 250 aa18.14■□□□□ 0.49
DFFA-203ENST00000476658 GJA5P36382 358 aa18.14■□□□□ 0.49
DFFA-203ENST00000476658 CTCFP49711 727 aaPredicted RBP18.14■□□□□ 0.49
DFFA-203ENST00000476658 SREBF2Q12772 1141 aa18.14■□□□□ 0.49
DFFA-203ENST00000476658 OTUD5Q96G74 571 aa18.14■□□□□ 0.49
DFFA-203ENST00000476658 FSD1Q9BTV5 496 aa18.14■□□□□ 0.49
DFFA-203ENST00000476658 PI4KBQ9UBF8 816 aa18.14■□□□□ 0.49
DFFA-203ENST00000476658 MANSC4A6NHS7 340 aaPredicted RBP18.13■□□□□ 0.49
DFFA-203ENST00000476658 SPDYE5A6NIY4 337 aa18.13■□□□□ 0.49
DFFA-203ENST00000476658 CA12O43570 354 aa18.13■□□□□ 0.49
DFFA-203ENST00000476658 TBC1D12O60347 775 aa18.13■□□□□ 0.49
DFFA-203ENST00000476658 MAP3K10Q02779 954 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms