RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 NFIAQ12857 509 aa13.83□□□□□ -0.2
EXOSC1-208ENST00000476234 PUM3Q15397 648 aaKnown RBP13.83□□□□□ -0.2
EXOSC1-208ENST00000476234 SLAIN1Q8ND83 568 aa13.83□□□□□ -0.2
EXOSC1-208ENST00000476234 WDR66Q8TBY9 1149 aa13.83□□□□□ -0.2
EXOSC1-208ENST00000476234 U2AF1L4Q8WU68 220 aaKnown RBP13.83□□□□□ -0.2
EXOSC1-208ENST00000476234 PARK7Q99497 189 aaKnown RBP13.83□□□□□ -0.2
EXOSC1-208ENST00000476234 RNF208Q9H0X6 261 aa13.83□□□□□ -0.2
EXOSC1-208ENST00000476234 GTF3C3Q9Y5Q9 886 aa13.83□□□□□ -0.2
EXOSC1-208ENST00000476234 PHF20L1A8MW92 1017 aa13.82□□□□□ -0.2
EXOSC1-208ENST00000476234 ZBTB22O15209 634 aa13.82□□□□□ -0.2
EXOSC1-208ENST00000476234 SGPL1O95470 568 aa13.82□□□□□ -0.2
EXOSC1-208ENST00000476234 IFIT1P09914 478 aaKnown RBP13.82□□□□□ -0.2
EXOSC1-208ENST00000476234 CT47B1P0C2W7 299 aaPredicted RBP13.82□□□□□ -0.2
EXOSC1-208ENST00000476234 FCGRTP55899 365 aa13.82□□□□□ -0.2
EXOSC1-208ENST00000476234 FAM198AQ9UFP1 575 aa13.82□□□□□ -0.2
EXOSC1-208ENST00000476234 NR2E3Q9Y5X4 410 aa13.82□□□□□ -0.2
EXOSC1-208ENST00000476234 MGAMO43451 1857 aa13.81□□□□□ -0.2
EXOSC1-208ENST00000476234 BCAR3O75815 825 aa13.81□□□□□ -0.2
EXOSC1-208ENST00000476234 ECM2O94769 699 aaPredicted RBP13.81□□□□□ -0.2
EXOSC1-208ENST00000476234 FARP2O94887 1054 aaPredicted RBP13.81□□□□□ -0.2
EXOSC1-208ENST00000476234 CYP2C8P10632 490 aa13.81□□□□□ -0.2
EXOSC1-208ENST00000476234 MAP3K10Q02779 954 aa13.81□□□□□ -0.2
EXOSC1-208ENST00000476234 ATG9AQ7Z3C6 839 aa13.81□□□□□ -0.2
EXOSC1-208ENST00000476234 PXYLP1Q8TE99 480 aa13.81□□□□□ -0.2
EXOSC1-208ENST00000476234 LPIN2Q92539 896 aa13.81□□□□□ -0.2
EXOSC1-208ENST00000476234 MEIS3Q99687 375 aa13.81□□□□□ -0.2
EXOSC1-208ENST00000476234 UNC93B1Q9H1C4 597 aa13.81□□□□□ -0.2
EXOSC1-208ENST00000476234 GABRQQ9UN88 632 aa13.81□□□□□ -0.2
EXOSC1-208ENST00000476234 SLC45A1Q9Y2W3 748 aa13.81□□□□□ -0.2
EXOSC1-208ENST00000476234 A0A0G2JLL6 359 aaPredicted RBP13.8□□□□□ -0.2
EXOSC1-208ENST00000476234 EYA2O00167 538 aa13.8□□□□□ -0.2
EXOSC1-208ENST00000476234 TCP10Q12799 353 aa13.8□□□□□ -0.2
EXOSC1-208ENST00000476234 IRF5Q13568 498 aa13.8□□□□□ -0.2
EXOSC1-208ENST00000476234 DIXDC1Q155Q3 683 aa13.8□□□□□ -0.2
EXOSC1-208ENST00000476234 PRRT2Q7Z6L0 340 aaPredicted RBP13.8□□□□□ -0.2
EXOSC1-208ENST00000476234 ZFPM1Q8IX07 1006 aa13.8□□□□□ -0.2
EXOSC1-208ENST00000476234 SALL1Q9NSC2 1324 aa13.8□□□□□ -0.2
EXOSC1-208ENST00000476234 PRDX5P30044 214 aa13.79□□□□□ -0.2
EXOSC1-208ENST00000476234 FLT3LGP49771 235 aa13.79□□□□□ -0.2
EXOSC1-208ENST00000476234 FASTKD5Q7L8L6 764 aaKnown RBP13.79□□□□□ -0.2
EXOSC1-208ENST00000476234 SCYL3Q8IZE3 742 aa13.79□□□□□ -0.2
EXOSC1-208ENST00000476234 IDI2Q9BXS1 227 aa13.79□□□□□ -0.2
EXOSC1-208ENST00000476234 CRISPLD2Q9H0B8 497 aa13.79□□□□□ -0.2
EXOSC1-208ENST00000476234 PAK6Q9NQU5 681 aaPredicted RBP13.79□□□□□ -0.2
EXOSC1-208ENST00000476234 BIN2Q9UBW5 565 aaPredicted RBP13.79□□□□□ -0.2
EXOSC1-208ENST00000476234 AFG3L2Q9Y4W6 797 aa13.79□□□□□ -0.2
EXOSC1-208ENST00000476234 LRRFIP2Q9Y608 721 aaKnown RBP13.79□□□□□ -0.2
EXOSC1-208ENST00000476234 RFX7Q2KHR2 1363 aa13.79□□□□□ -0.2
EXOSC1-208ENST00000476234 MYH13Q9UKX3 1938 aa13.78□□□□□ -0.2
EXOSC1-208ENST00000476234 ADCY3O60266 1144 aa13.78□□□□□ -0.2
EXOSC1-208ENST00000476234 ENTPD3O75355 529 aa13.78□□□□□ -0.2
EXOSC1-208ENST00000476234 SLC5A1P13866 664 aa13.78□□□□□ -0.2
EXOSC1-208ENST00000476234 PTPRAP18433 802 aa13.78□□□□□ -0.2
EXOSC1-208ENST00000476234 API5Q9BZZ5 524 aaKnown RBP13.78□□□□□ -0.2
EXOSC1-208ENST00000476234 USP40Q9NVE5 1235 aa13.78□□□□□ -0.2
EXOSC1-208ENST00000476234 PA2G4Q9UQ80 394 aaKnown RBP13.78□□□□□ -0.2
EXOSC1-208ENST00000476234 SOX1O00570 391 aaPredicted RBP13.77□□□□□ -0.21
EXOSC1-208ENST00000476234 GAKO14976 1311 aa13.77□□□□□ -0.21
EXOSC1-208ENST00000476234 INHAP05111 366 aa13.77□□□□□ -0.21
EXOSC1-208ENST00000476234 UBTFL1P0CB47 393 aaPredicted RBP13.77□□□□□ -0.21
EXOSC1-208ENST00000476234 TRIM27P14373 513 aa13.77□□□□□ -0.21
EXOSC1-208ENST00000476234 SH3BP5LQ7L8J4 393 aa13.77□□□□□ -0.21
EXOSC1-208ENST00000476234 DOCK2Q92608 1830 aa13.77□□□□□ -0.21
EXOSC1-208ENST00000476234 ARHGAP45Q92619 1136 aa13.77□□□□□ -0.21
EXOSC1-208ENST00000476234 SIL1Q9H173 461 aa13.77□□□□□ -0.21
EXOSC1-208ENST00000476234 FBXO3Q9UK99 471 aa13.77□□□□□ -0.21
EXOSC1-208ENST00000476234 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.77□□□□□ -0.21
EXOSC1-208ENST00000476234 ZHX2Q9Y6X8 837 aa13.77□□□□□ -0.21
EXOSC1-208ENST00000476234 PTPRFP10586 1907 aa13.76□□□□□ -0.21
EXOSC1-208ENST00000476234 SEMA3EO15041 775 aa13.76□□□□□ -0.21
EXOSC1-208ENST00000476234 LDHBP07195 334 aaKnown RBP13.76□□□□□ -0.21
EXOSC1-208ENST00000476234 ELNP15502 786 aa13.76□□□□□ -0.21
EXOSC1-208ENST00000476234 HNRNPUQ00839 825 aaKnown RBP eCLIP13.76□□□□□ -0.21
EXOSC1-208ENST00000476234 PICK1Q9NRD5 415 aa13.76□□□□□ -0.21
EXOSC1-208ENST00000476234 LAMA3Q16787 3333 aa13.76□□□□□ -0.21
EXOSC1-208ENST00000476234 PHIPQ8WWQ0 1821 aa13.76□□□□□ -0.21
EXOSC1-208ENST00000476234 DLL1O00548 723 aa13.75□□□□□ -0.21
EXOSC1-208ENST00000476234 EVI5O60447 810 aa13.75□□□□□ -0.21
EXOSC1-208ENST00000476234 CTNND1O60716 968 aaKnown RBP13.75□□□□□ -0.21
EXOSC1-208ENST00000476234 CIAO1O76071 339 aa13.75□□□□□ -0.21
EXOSC1-208ENST00000476234 BMP8BP34820 402 aa13.75□□□□□ -0.21
EXOSC1-208ENST00000476234 RGS3P49796 1198 aa13.75□□□□□ -0.21
EXOSC1-208ENST00000476234 SLC17A8Q8NDX2 589 aa13.75□□□□□ -0.21
EXOSC1-208ENST00000476234 FAM163AQ96GL9 167 aaPredicted RBP13.75□□□□□ -0.21
EXOSC1-208ENST00000476234 DEFB118Q96PH6 123 aa13.75□□□□□ -0.21
EXOSC1-208ENST00000476234 AK9Q5TCS8 1911 aa13.74□□□□□ -0.21
EXOSC1-208ENST00000476234 TNPO2O14787 897 aaKnown RBP13.74□□□□□ -0.21
EXOSC1-208ENST00000476234 TFRCP02786 760 aaKnown RBP13.74□□□□□ -0.21
EXOSC1-208ENST00000476234 GPR153Q6NV75 609 aa13.74□□□□□ -0.21
EXOSC1-208ENST00000476234 CLUAP1Q96AJ1 413 aa13.74□□□□□ -0.21
EXOSC1-208ENST00000476234 LRCH3Q96II8 777 aa13.74□□□□□ -0.21
EXOSC1-208ENST00000476234 GDF15Q99988 308 aa13.74□□□□□ -0.21
EXOSC1-208ENST00000476234 GNL3LQ9NVN8 582 aaKnown RBP13.74□□□□□ -0.21
EXOSC1-208ENST00000476234 STAP2Q9UGK3 403 aa13.74□□□□□ -0.21
EXOSC1-208ENST00000476234 DENND2AQ9ULE3 1009 aa13.74□□□□□ -0.21
EXOSC1-208ENST00000476234 ALPK3Q96L96 1907 aa13.74□□□□□ -0.21
EXOSC1-208ENST00000476234 DOCK1Q14185 1865 aa13.74□□□□□ -0.21
EXOSC1-208ENST00000476234 COL6A3P12111 3177 aa13.73□□□□□ -0.21
EXOSC1-208ENST00000476234 PDS5AQ29RF7 1337 aaKnown RBP13.73□□□□□ -0.21
EXOSC1-208ENST00000476234 DDTLA6NHG4 134 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms