RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, human

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-223	ENST00000476135	ANKRD18A	Q8IVF6	992 aa		9.39	□□□□□ -0.91
HDAC9-223	ENST00000476135	C7orf61	Q8IZ16	206 aa		9.39	□□□□□ -0.91
HDAC9-223	ENST00000476135	PLBD2	Q8NHP8	589 aa		9.39	□□□□□ -0.91
HDAC9-223	ENST00000476135	PAWR	Q96IZ0	340 aa	Known RBP	9.39	□□□□□ -0.91
HDAC9-223	ENST00000476135	UBE2O	Q9C0C9	1292 aa	Known RBP	9.39	□□□□□ -0.91
HDAC9-223	ENST00000476135	RAPGEFL1	Q9UHV5	662 aa		9.39	□□□□□ -0.91
HDAC9-223	ENST00000476135	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	9.39	□□□□□ -0.91
HDAC9-223	ENST00000476135	TTC28	Q96AY4	2481 aa		9.39	□□□□□ -0.91
HDAC9-223	ENST00000476135	BTBD19	C9JJ37	291 aa		9.38	□□□□□ -0.91
HDAC9-223	ENST00000476135	TNFRSF10A	O00220	468 aa		9.38	□□□□□ -0.91
HDAC9-223	ENST00000476135	FMNL1	O95466	1100 aa	Predicted RBP	9.38	□□□□□ -0.91
HDAC9-223	ENST00000476135	SLC4A3	P48751	1232 aa		9.38	□□□□□ -0.91
HDAC9-223	ENST00000476135	RASA3	Q14644	834 aa		9.38	□□□□□ -0.91
HDAC9-223	ENST00000476135	RTL5	Q5HYW3	569 aa	Predicted RBP	9.38	□□□□□ -0.91
HDAC9-223	ENST00000476135	ADGRA2	Q96PE1	1338 aa		9.37	□□□□□ -0.91
HDAC9-223	ENST00000476135	MGAM	O43451	1857 aa		9.37	□□□□□ -0.91
HDAC9-223	ENST00000476135	COL2A1	P02458	1487 aa	Predicted RBP	9.37	□□□□□ -0.91
HDAC9-223	ENST00000476135	SPDYE5	A6NIY4	337 aa		9.37	□□□□□ -0.91
HDAC9-223	ENST00000476135	ATP5J2-PTCD1	G3V325	749 aa		9.37	□□□□□ -0.91
HDAC9-223	ENST00000476135	DNAJB2	P25686	324 aa		9.37	□□□□□ -0.91
HDAC9-223	ENST00000476135	CCT4	P50991	539 aa	Known RBP	9.37	□□□□□ -0.91
HDAC9-223	ENST00000476135	COPS2	P61201	443 aa		9.37	□□□□□ -0.91
HDAC9-223	ENST00000476135	VGLL4	Q14135	290 aa		9.37	□□□□□ -0.91
HDAC9-223	ENST00000476135	ANKLE1	Q8NAG6	615 aa		9.37	□□□□□ -0.91
HDAC9-223	ENST00000476135	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	9.37	□□□□□ -0.91
HDAC9-223	ENST00000476135	MAFA	Q8NHW3	353 aa	Predicted RBP	9.37	□□□□□ -0.91
HDAC9-223	ENST00000476135	DEFB118	Q96PH6	123 aa		9.37	□□□□□ -0.91
HDAC9-223	ENST00000476135	VEZT	Q9HBM0	779 aa		9.37	□□□□□ -0.91
HDAC9-223	ENST00000476135	CSAD	Q9Y600	493 aa		9.37	□□□□□ -0.91
HDAC9-223	ENST00000476135	CLRN2	A0PK11	232 aa		9.36	□□□□□ -0.91
HDAC9-223	ENST00000476135	SYN1	P17600	705 aa		9.36	□□□□□ -0.91
HDAC9-223	ENST00000476135	GTF2I	P78347	998 aa		9.36	□□□□□ -0.91
HDAC9-223	ENST00000476135	PRKCZ	Q05513	592 aa		9.36	□□□□□ -0.91
HDAC9-223	ENST00000476135	SNAPC2	Q13487	334 aa		9.36	□□□□□ -0.91
HDAC9-223	ENST00000476135	CFAP100	Q494V2	611 aa		9.36	□□□□□ -0.91
HDAC9-223	ENST00000476135	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	9.36	□□□□□ -0.91
HDAC9-223	ENST00000476135	PRMT6	Q96LA8	375 aa	Predicted RBP	9.36	□□□□□ -0.91
HDAC9-223	ENST00000476135	TMEM134	Q9H6X4	195 aa		9.36	□□□□□ -0.91
HDAC9-223	ENST00000476135	PAK6	Q9NQU5	681 aa	Predicted RBP	9.36	□□□□□ -0.91
HDAC9-223	ENST00000476135	CPA4	Q9UI42	421 aa		9.36	□□□□□ -0.91
HDAC9-223	ENST00000476135	TSPYL4	Q9UJ04	414 aa		9.36	□□□□□ -0.91
HDAC9-223	ENST00000476135	MINPP1	Q9UNW1	487 aa		9.36	□□□□□ -0.91
HDAC9-223	ENST00000476135	PCDHAC2	Q9Y5I4	1007 aa		9.36	□□□□□ -0.91
HDAC9-223	ENST00000476135	EYS	Q5T1H1	3165 aa		9.36	□□□□□ -0.91
HDAC9-223	ENST00000476135	ADCY3	O60266	1144 aa		9.35	□□□□□ -0.91
HDAC9-223	ENST00000476135	PDE8A	O60658	829 aa		9.35	□□□□□ -0.91
HDAC9-223	ENST00000476135	NEFM	P07197	916 aa		9.35	□□□□□ -0.91
HDAC9-223	ENST00000476135	FCGRT	P55899	365 aa		9.35	□□□□□ -0.91
HDAC9-223	ENST00000476135	TNFAIP1	Q13829	316 aa		9.35	□□□□□ -0.91
HDAC9-223	ENST00000476135	ZNF697	Q5TEC3	545 aa		9.35	□□□□□ -0.91
HDAC9-223	ENST00000476135	TXNRD3	Q86VQ6	643 aa		9.35	□□□□□ -0.91
HDAC9-223	ENST00000476135	ERO1B	Q86YB8	467 aa		9.35	□□□□□ -0.91
HDAC9-223	ENST00000476135	PXYLP1	Q8TE99	480 aa		9.35	□□□□□ -0.91
HDAC9-223	ENST00000476135	FAM161B	Q96MY7	647 aa		9.35	□□□□□ -0.91
HDAC9-223	ENST00000476135	CDC5L	Q99459	802 aa	Known RBP	9.35	□□□□□ -0.91
HDAC9-223	ENST00000476135	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	9.35	□□□□□ -0.91
HDAC9-223	ENST00000476135	BSDC1	Q9NW68	430 aa	Predicted RBP	9.35	□□□□□ -0.91
HDAC9-223	ENST00000476135	BABAM1	Q9NWV8	329 aa		9.35	□□□□□ -0.91
HDAC9-223	ENST00000476135	LEMD3	Q9Y2U8	911 aa		9.35	□□□□□ -0.91
HDAC9-223	ENST00000476135	RCCD1	A6NED2	376 aa		9.34	□□□□□ -0.91
HDAC9-223	ENST00000476135	INHA	P05111	366 aa		9.34	□□□□□ -0.91
HDAC9-223	ENST00000476135	PPIL2	Q13356	520 aa		9.34	□□□□□ -0.91
HDAC9-223	ENST00000476135	ANKRD23	Q86SG2	305 aa		9.34	□□□□□ -0.91
HDAC9-223	ENST00000476135	CERS5	Q8N5B7	392 aa		9.34	□□□□□ -0.91
HDAC9-223	ENST00000476135	DIS3L	Q8TF46	1054 aa	Known RBP	9.34	□□□□□ -0.91
HDAC9-223	ENST00000476135	TEPSIN	Q96N21	525 aa		9.34	□□□□□ -0.91
HDAC9-223	ENST00000476135	CDX2	Q99626	313 aa	Predicted RBP	9.34	□□□□□ -0.91
HDAC9-223	ENST00000476135	PRKD2	Q9BZL6	878 aa		9.34	□□□□□ -0.91
HDAC9-223	ENST00000476135	GABRQ	Q9UN88	632 aa		9.34	□□□□□ -0.91
HDAC9-223	ENST00000476135	PRUNE2	Q8WUY3	3088 aa		9.34	□□□□□ -0.91
HDAC9-223	ENST00000476135	ARAP2	Q8WZ64	1704 aa		9.34	□□□□□ -0.92
HDAC9-223	ENST00000476135	SPEF2	Q9C093	1822 aa		9.33	□□□□□ -0.92
HDAC9-223	ENST00000476135	MUC3A	Q02505	3323 aa		9.33	□□□□□ -0.92
HDAC9-223	ENST00000476135	IRF6	O14896	467 aa		9.33	□□□□□ -0.92
HDAC9-223	ENST00000476135	FKBP1A	P62942	108 aa	Known RBP	9.33	□□□□□ -0.92
HDAC9-223	ENST00000476135	IRF5	Q13568	498 aa		9.33	□□□□□ -0.92
HDAC9-223	ENST00000476135	NFE2L2	Q16236	605 aa		9.33	□□□□□ -0.92
HDAC9-223	ENST00000476135		Q6ZNB5	142 aa		9.33	□□□□□ -0.92
HDAC9-223	ENST00000476135	PRR14	Q9BWN1	585 aa		9.33	□□□□□ -0.92
HDAC9-223	ENST00000476135	PCGF6	Q9BYE7	350 aa		9.33	□□□□□ -0.92
HDAC9-223	ENST00000476135	SNCAIP	Q9Y6H5	919 aa		9.33	□□□□□ -0.92
HDAC9-223	ENST00000476135	AOX1	Q06278	1338 aa		9.32	□□□□□ -0.92
HDAC9-223	ENST00000476135	SYNGAP1	Q96PV0	1343 aa		9.32	□□□□□ -0.92
HDAC9-223	ENST00000476135	TMEM265	A0A087WTH1	108 aa		9.32	□□□□□ -0.92
HDAC9-223	ENST00000476135	PDHX	O00330	501 aa		9.32	□□□□□ -0.92
HDAC9-223	ENST00000476135	PCCA	P05165	728 aa	Predicted RBP	9.32	□□□□□ -0.92
HDAC9-223	ENST00000476135	BCR	P11274	1271 aa		9.32	□□□□□ -0.92
HDAC9-223	ENST00000476135	ELN	P15502	786 aa		9.32	□□□□□ -0.92
HDAC9-223	ENST00000476135	MAP3K12	Q12852	859 aa		9.32	□□□□□ -0.92
HDAC9-223	ENST00000476135	CCDC85A	Q96PX6	553 aa	Predicted RBP	9.32	□□□□□ -0.92
HDAC9-223	ENST00000476135	CD209	Q9NNX6	404 aa		9.32	□□□□□ -0.92
HDAC9-223	ENST00000476135	CHPF2	Q9P2E5	772 aa		9.32	□□□□□ -0.92
HDAC9-223	ENST00000476135	ZNF70	Q9UC06	446 aa	Predicted RBP	9.32	□□□□□ -0.92
HDAC9-223	ENST00000476135	PCDHB3	Q9Y5E6	796 aa		9.32	□□□□□ -0.92
HDAC9-223	ENST00000476135	DDX60L	Q5H9U9	1706 aa	Known RBP	9.31	□□□□□ -0.92
HDAC9-223	ENST00000476135	FLT3LG	P49771	235 aa		9.31	□□□□□ -0.92
HDAC9-223	ENST00000476135	BLOC1S3	Q6QNY0	202 aa		9.31	□□□□□ -0.92
HDAC9-223	ENST00000476135	CCDC191	Q8NCU4	936 aa		9.31	□□□□□ -0.92
HDAC9-223	ENST00000476135	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	9.31	□□□□□ -0.92
HDAC9-223	ENST00000476135	SEMA6B	Q9H3T3	888 aa		9.31	□□□□□ -0.92

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