RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 SLC30A3Q99726 388 aa5.73□□□□□ -1.49
VPS13D-206ENST00000476045 BRD7Q9NPI1 651 aa5.73□□□□□ -1.49
VPS13D-206ENST00000476045 C11orf16Q9NQ32 467 aa5.73□□□□□ -1.49
VPS13D-206ENST00000476045 BCS1LQ9Y276 419 aa5.73□□□□□ -1.49
VPS13D-206ENST00000476045 HCN4Q9Y3Q4 1203 aa5.73□□□□□ -1.49
VPS13D-206ENST00000476045 PROCP04070 461 aa5.72□□□□□ -1.49
VPS13D-206ENST00000476045 GRNP28799 593 aaKnown RBP5.72□□□□□ -1.49
VPS13D-206ENST00000476045 SPEM2Q0P670 501 aa5.72□□□□□ -1.49
VPS13D-206ENST00000476045 SYT9Q86SS6 491 aa5.72□□□□□ -1.49
VPS13D-206ENST00000476045 ZCRB1Q8TBF4 217 aaKnown RBP5.72□□□□□ -1.49
VPS13D-206ENST00000476045 SCN11AQ9UI33 1791 aa5.72□□□□□ -1.49
VPS13D-206ENST00000476045 KIF13BQ9NQT8 1826 aa5.71□□□□□ -1.49
VPS13D-206ENST00000476045 FYB1O15117 783 aa5.71□□□□□ -1.5
VPS13D-206ENST00000476045 ATG7O95352 703 aa5.71□□□□□ -1.5
VPS13D-206ENST00000476045 PCBP4P57723 403 aaKnown RBP5.71□□□□□ -1.5
VPS13D-206ENST00000476045 COL9A3Q14050 684 aaPredicted RBP5.71□□□□□ -1.5
VPS13D-206ENST00000476045 OCLNQ16625 522 aa5.71□□□□□ -1.5
VPS13D-206ENST00000476045 NOVA2Q9UNW9 492 aaKnown RBP5.71□□□□□ -1.5
VPS13D-206ENST00000476045 KCNH4Q9UQ05 1017 aa5.71□□□□□ -1.5
VPS13D-206ENST00000476045 C4AP0C0L4 1744 aa5.71□□□□□ -1.5
VPS13D-206ENST00000476045 PALLDQ8WX93 1383 aa5.7□□□□□ -1.5
VPS13D-206ENST00000476045 KRBA1A5PL33 1030 aa5.7□□□□□ -1.5
VPS13D-206ENST00000476045 POLD1P28340 1107 aa5.7□□□□□ -1.5
VPS13D-206ENST00000476045 FAM200AQ8TCP9 573 aa5.7□□□□□ -1.5
VPS13D-206ENST00000476045 SMARCC1Q92922 1105 aaPredicted RBP5.7□□□□□ -1.5
VPS13D-206ENST00000476045 COL26A1Q96A83 441 aa5.7□□□□□ -1.5
VPS13D-206ENST00000476045 LTV1Q96GA3 475 aaPredicted RBP5.7□□□□□ -1.5
VPS13D-206ENST00000476045 ACSBG1Q96GR2 724 aa5.7□□□□□ -1.5
VPS13D-206ENST00000476045 CEP63Q96MT8 703 aa5.7□□□□□ -1.5
VPS13D-206ENST00000476045 GGNBP2Q9H3C7 697 aa5.7□□□□□ -1.5
VPS13D-206ENST00000476045 SUV39H2Q9H5I1 410 aa5.7□□□□□ -1.5
VPS13D-206ENST00000476045 NEUROD4Q9HD90 331 aa5.7□□□□□ -1.5
VPS13D-206ENST00000476045 PRR12Q9ULL5 1215 aa5.7□□□□□ -1.5
VPS13D-206ENST00000476045 STARD13Q9Y3M8 1113 aa5.7□□□□□ -1.5
VPS13D-206ENST00000476045 WASHC2AQ641Q2 1341 aa5.7□□□□□ -1.5
VPS13D-206ENST00000476045 MRC1P22897 1456 aa5.7□□□□□ -1.5
VPS13D-206ENST00000476045 ADAMTS7Q9UKP4 1686 aa5.69□□□□□ -1.5
VPS13D-206ENST00000476045 INPP5BP32019 993 aa5.69□□□□□ -1.5
VPS13D-206ENST00000476045 DDX10Q13206 875 aaKnown RBP5.69□□□□□ -1.5
VPS13D-206ENST00000476045 RRS1Q15050 365 aaKnown RBP5.69□□□□□ -1.5
VPS13D-206ENST00000476045 C20orf204Q6ZNR8 217 aa5.69□□□□□ -1.5
VPS13D-206ENST00000476045 PTF1AQ7RTS3 328 aa5.69□□□□□ -1.5
VPS13D-206ENST00000476045 FLAD1Q8NFF5 587 aa5.69□□□□□ -1.5
VPS13D-206ENST00000476045 TRIM11Q96F44 468 aa5.69□□□□□ -1.5
VPS13D-206ENST00000476045 SPOCK3Q9BQ16 436 aa5.69□□□□□ -1.5
VPS13D-206ENST00000476045 HINFPQ9BQA5 517 aa5.69□□□□□ -1.5
VPS13D-206ENST00000476045 NOP53Q9NZM5 478 aaKnown RBP5.69□□□□□ -1.5
VPS13D-206ENST00000476045 BRCA1P38398 1863 aaKnown RBP5.68□□□□□ -1.5
VPS13D-206ENST00000476045 UBR2Q8IWV8 1755 aa5.68□□□□□ -1.5
VPS13D-206ENST00000476045 ZBTB7AO95365 584 aa5.68□□□□□ -1.5
VPS13D-206ENST00000476045 AMPD1P23109 780 aa5.68□□□□□ -1.5
VPS13D-206ENST00000476045 YY1P25490 414 aa5.68□□□□□ -1.5
VPS13D-206ENST00000476045 FKBP5Q13451 457 aaPredicted RBP5.68□□□□□ -1.5
VPS13D-206ENST00000476045 ZNF827Q17R98 1081 aa5.68□□□□□ -1.5
VPS13D-206ENST00000476045 HSP90AB2PQ58FF8 381 aa5.68□□□□□ -1.5
VPS13D-206ENST00000476045 NBPF6Q5VWK0 638 aa5.68□□□□□ -1.5
VPS13D-206ENST00000476045 DDX54Q8TDD1 881 aaKnown RBP5.68□□□□□ -1.5
VPS13D-206ENST00000476045 SYTL4Q96C24 671 aaPredicted RBP5.68□□□□□ -1.5
VPS13D-206ENST00000476045 NBPF4Q96M43 638 aa5.68□□□□□ -1.5
VPS13D-206ENST00000476045 C1orf115Q9H7X2 142 aa5.68□□□□□ -1.5
VPS13D-206ENST00000476045 CCNL1Q9UK58 526 aaPredicted RBP5.68□□□□□ -1.5
VPS13D-206ENST00000476045 SPG7Q9UQ90 795 aa5.68□□□□□ -1.5
VPS13D-206ENST00000476045 PNPLA7Q6ZV29 1317 aa5.68□□□□□ -1.5
VPS13D-206ENST00000476045 IGSF1Q8N6C5 1336 aa5.68□□□□□ -1.5
VPS13D-206ENST00000476045 TJP1Q07157 1748 aa5.68□□□□□ -1.5
VPS13D-206ENST00000476045 KDRP35968 1356 aa5.67□□□□□ -1.5
VPS13D-206ENST00000476045 ARFGEF1Q9Y6D6 1849 aa5.67□□□□□ -1.5
VPS13D-206ENST00000476045 LOC100996750A0A140TA64 210 aa5.67□□□□□ -1.5
VPS13D-206ENST00000476045 HSP90AB1P08238 724 aaKnown RBP5.67□□□□□ -1.5
VPS13D-206ENST00000476045 ADH7P40394 386 aa5.67□□□□□ -1.5
VPS13D-206ENST00000476045 GPAT2Q6NUI2 795 aa5.67□□□□□ -1.5
VPS13D-206ENST00000476045 STK32AQ8WU08 396 aa5.67□□□□□ -1.5
VPS13D-206ENST00000476045 CLP1Q92989 425 aaKnown RBP5.67□□□□□ -1.5
VPS13D-206ENST00000476045 PBXIP1Q96AQ6 731 aa5.67□□□□□ -1.5
VPS13D-206ENST00000476045 KRTAP4-6Q9BYQ5 205 aa5.67□□□□□ -1.5
VPS13D-206ENST00000476045 GSX2Q9BZM3 304 aa5.67□□□□□ -1.5
VPS13D-206ENST00000476045 RRAGCQ9HB90 399 aa5.67□□□□□ -1.5
VPS13D-206ENST00000476045 PODXL2Q9NZ53 605 aa5.67□□□□□ -1.5
VPS13D-206ENST00000476045 TFCP2L1Q9NZI6 479 aa5.67□□□□□ -1.5
VPS13D-206ENST00000476045 NPC1L1Q9UHC9 1359 aa5.67□□□□□ -1.5
VPS13D-206ENST00000476045 SCN7AQ01118 1682 aa5.66□□□□□ -1.5
VPS13D-206ENST00000476045 KIAA1551Q9HCM1 1747 aa5.66□□□□□ -1.5
VPS13D-206ENST00000476045 MYH14Q7Z406 1995 aaKnown RBP5.66□□□□□ -1.5
VPS13D-206ENST00000476045 SIPA1L3O60292 1781 aaPredicted RBP5.66□□□□□ -1.5
VPS13D-206ENST00000476045 DLEC1Q9Y238 1755 aa5.66□□□□□ -1.5
VPS13D-206ENST00000476045 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.66□□□□□ -1.5
VPS13D-206ENST00000476045 MSTNO14793 375 aa5.66□□□□□ -1.5
VPS13D-206ENST00000476045 MAP3K6O95382 1288 aa5.66□□□□□ -1.5
VPS13D-206ENST00000476045 EGFRP00533 1210 aa5.66□□□□□ -1.5
VPS13D-206ENST00000476045 ALBP02768 609 aa5.66□□□□□ -1.5
VPS13D-206ENST00000476045 NID1P14543 1247 aa5.66□□□□□ -1.5
VPS13D-206ENST00000476045 SSFA2P28290 1259 aa5.66□□□□□ -1.5
VPS13D-206ENST00000476045 DGKZQ13574 1117 aa5.66□□□□□ -1.5
VPS13D-206ENST00000476045 IFNL2Q8IZJ0 200 aa5.66□□□□□ -1.5
VPS13D-206ENST00000476045 USHBP1Q8N6Y0 703 aa5.66□□□□□ -1.5
VPS13D-206ENST00000476045 CXXC1Q9P0U4 656 aaPredicted RBP5.66□□□□□ -1.5
VPS13D-206ENST00000476045 LRFN2Q9ULH4 789 aa5.66□□□□□ -1.5
VPS13D-206ENST00000476045 SUPT16HQ9Y5B9 1047 aaKnown RBP5.66□□□□□ -1.5
VPS13D-206ENST00000476045 CEP350Q5VT06 3117 aa5.65□□□□□ -1.5
VPS13D-206ENST00000476045 CYP27B1O15528 508 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms