RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 CDX2Q99626 313 aaPredicted RBP18.36■□□□□ 0.53
CSNK2B-207ENST00000475875 PICK1Q9NRD5 415 aa18.36■□□□□ 0.53
CSNK2B-207ENST00000475875 PNMA3Q9UL41 463 aa18.36■□□□□ 0.53
CSNK2B-207ENST00000475875 AFG3L2Q9Y4W6 797 aa18.36■□□□□ 0.53
CSNK2B-207ENST00000475875 GADL1Q6ZQY3 521 aa18.35■□□□□ 0.53
CSNK2B-207ENST00000475875 CDH23Q9H251 3354 aa18.34■□□□□ 0.53
CSNK2B-207ENST00000475875 MROH5Q6ZUA9 1318 aa18.34■□□□□ 0.53
CSNK2B-207ENST00000475875 PTPRAP18433 802 aa18.34■□□□□ 0.53
CSNK2B-207ENST00000475875 MDM2Q00987 491 aaPredicted RBP18.34■□□□□ 0.53
CSNK2B-207ENST00000475875 FKBP5Q13451 457 aaPredicted RBP18.34■□□□□ 0.53
CSNK2B-207ENST00000475875 MAP3K21Q5TCX8 1036 aa18.34■□□□□ 0.53
CSNK2B-207ENST00000475875 ANKRD13CQ8N6S4 541 aa18.34■□□□□ 0.53
CSNK2B-207ENST00000475875 GJD2Q9UKL4 321 aa18.34■□□□□ 0.53
CSNK2B-207ENST00000475875 AGTPBP1Q9UPW5 1226 aa18.34■□□□□ 0.53
CSNK2B-207ENST00000475875 DOCK3Q8IZD9 2030 aa18.33■□□□□ 0.53
CSNK2B-207ENST00000475875 MYBBP1AQ9BQG0 1328 aaKnown RBP18.33■□□□□ 0.53
CSNK2B-207ENST00000475875 PHF20L1A8MW92 1017 aa18.33■□□□□ 0.52
CSNK2B-207ENST00000475875 GCLCP48506 637 aaPredicted RBP18.33■□□□□ 0.52
CSNK2B-207ENST00000475875 LBHD1Q9BQE6 289 aaPredicted RBP18.33■□□□□ 0.52
CSNK2B-207ENST00000475875 ATRNL1Q5VV63 1379 aa18.32■□□□□ 0.52
CSNK2B-207ENST00000475875 TCP10Q12799 353 aa18.32■□□□□ 0.52
CSNK2B-207ENST00000475875 SEMA6BQ9H3T3 888 aa18.32■□□□□ 0.52
CSNK2B-207ENST00000475875 IQSEC3Q9UPP2 1182 aaPredicted RBP18.32■□□□□ 0.52
CSNK2B-207ENST00000475875 TNFRSF10AO00220 468 aa18.31■□□□□ 0.52
CSNK2B-207ENST00000475875 PLA2G5P39877 138 aa18.31■□□□□ 0.52
CSNK2B-207ENST00000475875 LRRC26Q2I0M4 334 aa18.31■□□□□ 0.52
CSNK2B-207ENST00000475875 EPHA10Q5JZY3 1008 aa18.31■□□□□ 0.52
CSNK2B-207ENST00000475875 SPINK5Q9NQ38 1064 aaPredicted RBP18.31■□□□□ 0.52
CSNK2B-207ENST00000475875 KIF16BQ96L93 1317 aa18.3■□□□□ 0.52
CSNK2B-207ENST00000475875 APAF1O14727 1248 aa18.3■□□□□ 0.52
CSNK2B-207ENST00000475875 MAP3K10Q02779 954 aa18.3■□□□□ 0.52
CSNK2B-207ENST00000475875 NFIAQ12857 509 aa18.3■□□□□ 0.52
CSNK2B-207ENST00000475875 TRIM32Q13049 653 aa18.3■□□□□ 0.52
CSNK2B-207ENST00000475875 TWISTNBQ3B726 338 aaPredicted RBP18.3■□□□□ 0.52
CSNK2B-207ENST00000475875 TJAP1Q5JTD0 557 aa18.3■□□□□ 0.52
CSNK2B-207ENST00000475875 CDC42EP5Q6NZY7 148 aa18.3■□□□□ 0.52
CSNK2B-207ENST00000475875 TRMT44Q8IYL2 757 aaKnown RBP18.3■□□□□ 0.52
CSNK2B-207ENST00000475875 PROCA1Q8NCQ7 364 aaPredicted RBP18.3■□□□□ 0.52
CSNK2B-207ENST00000475875 XRCC5P13010 732 aaKnown RBP18.29■□□□□ 0.52
CSNK2B-207ENST00000475875 TRIB2Q92519 343 aa18.29■□□□□ 0.52
CSNK2B-207ENST00000475875 FAM198AQ9UFP1 575 aa18.29■□□□□ 0.52
CSNK2B-207ENST00000475875 DNAH12Q6ZR08 3092 aa18.29■□□□□ 0.52
CSNK2B-207ENST00000475875 PTPRFP10586 1907 aa18.28■□□□□ 0.52
CSNK2B-207ENST00000475875 GRM8O00222 908 aa18.28■□□□□ 0.52
CSNK2B-207ENST00000475875 CTNND1O60716 968 aaKnown RBP18.28■□□□□ 0.52
CSNK2B-207ENST00000475875 PRKAR2AP13861 404 aaKnown RBP18.28■□□□□ 0.52
CSNK2B-207ENST00000475875 PABPC4Q13310 644 aaKnown RBP eCLIP18.28■□□□□ 0.52
CSNK2B-207ENST00000475875 BEND3Q5T5X7 828 aa18.28■□□□□ 0.52
CSNK2B-207ENST00000475875 WDR66Q8TBY9 1149 aa18.28■□□□□ 0.52
CSNK2B-207ENST00000475875 DAGLAQ9Y4D2 1042 aa18.28■□□□□ 0.52
CSNK2B-207ENST00000475875 TRIM75PA6NK02 468 aa18.27■□□□□ 0.52
CSNK2B-207ENST00000475875 SMAD3P84022 425 aaKnown RBP18.27■□□□□ 0.52
CSNK2B-207ENST00000475875 SOCS4Q8WXH5 440 aa18.27■□□□□ 0.52
CSNK2B-207ENST00000475875 FAM122AQ96E09 287 aa18.27■□□□□ 0.52
CSNK2B-207ENST00000475875 PUS3Q9BZE2 481 aaKnown RBP18.27■□□□□ 0.52
CSNK2B-207ENST00000475875 LRRFIP2Q9Y608 721 aaKnown RBP18.27■□□□□ 0.52
CSNK2B-207ENST00000475875 AK9Q5TCS8 1911 aa18.26■□□□□ 0.51
CSNK2B-207ENST00000475875 TMEM265A0A087WTH1 108 aa18.26■□□□□ 0.51
CSNK2B-207ENST00000475875 ENTPD3O75355 529 aa18.26■□□□□ 0.51
CSNK2B-207ENST00000475875 FOSL2P15408 326 aa18.26■□□□□ 0.51
CSNK2B-207ENST00000475875 MYLIPQ8WY64 445 aa18.26■□□□□ 0.51
CSNK2B-207ENST00000475875 MORF4L1Q9UBU8 362 aa18.26■□□□□ 0.51
CSNK2B-207ENST00000475875 PDE8BO95263 885 aa18.25■□□□□ 0.51
CSNK2B-207ENST00000475875 TREML2Q5T2D2 321 aa18.25■□□□□ 0.51
CSNK2B-207ENST00000475875 LHX8Q68G74 356 aa18.25■□□□□ 0.51
CSNK2B-207ENST00000475875 TSR2Q969E8 191 aaKnown RBP18.25■□□□□ 0.51
CSNK2B-207ENST00000475875 NUDT12Q9BQG2 462 aa18.25■□□□□ 0.51
CSNK2B-207ENST00000475875 IDI2Q9BXS1 227 aa18.25■□□□□ 0.51
CSNK2B-207ENST00000475875 TBC1D2Q9BYX2 928 aa18.25■□□□□ 0.51
CSNK2B-207ENST00000475875 USP40Q9NVE5 1235 aa18.25■□□□□ 0.51
CSNK2B-207ENST00000475875 PRKAG2Q9UGJ0 569 aa18.25■□□□□ 0.51
CSNK2B-207ENST00000475875 METTL24Q5JXM2 366 aa18.24■□□□□ 0.51
CSNK2B-207ENST00000475875 VGLL2Q8N8G2 317 aa18.24■□□□□ 0.51
CSNK2B-207ENST00000475875 CACNA1FO60840 1977 aa18.24■□□□□ 0.51
CSNK2B-207ENST00000475875 CYP2B6P20813 491 aa18.23■□□□□ 0.51
CSNK2B-207ENST00000475875 ZFPM1Q8IX07 1006 aa18.23■□□□□ 0.51
CSNK2B-207ENST00000475875 TTYH1Q9H313 450 aaPredicted RBP18.23■□□□□ 0.51
CSNK2B-207ENST00000475875 C9orf78Q9NZ63 289 aaPredicted RBP18.23■□□□□ 0.51
CSNK2B-207ENST00000475875 DOCK1Q14185 1865 aa18.22■□□□□ 0.51
CSNK2B-207ENST00000475875 PHIPQ8WWQ0 1821 aa18.22■□□□□ 0.51
CSNK2B-207ENST00000475875 DOCK2Q92608 1830 aa18.22■□□□□ 0.51
CSNK2B-207ENST00000475875 IFIT1P09914 478 aaKnown RBP18.22■□□□□ 0.51
CSNK2B-207ENST00000475875 ZKSCAN1P17029 563 aaPredicted RBP18.22■□□□□ 0.51
CSNK2B-207ENST00000475875 HOXD11P31277 338 aaPredicted RBP18.22■□□□□ 0.51
CSNK2B-207ENST00000475875 CACNB2Q08289 660 aaPredicted RBP18.22■□□□□ 0.51
CSNK2B-207ENST00000475875 DIXDC1Q155Q3 683 aa18.22■□□□□ 0.51
CSNK2B-207ENST00000475875 RGS3P49796 1198 aa18.21■□□□□ 0.51
CSNK2B-207ENST00000475875 SHHQ15465 462 aa18.21■□□□□ 0.51
CSNK2B-207ENST00000475875 ASCC2Q9H1I8 757 aaPredicted RBP18.21■□□□□ 0.51
CSNK2B-207ENST00000475875 MAST2Q6P0Q8 1798 aa18.21■□□□□ 0.51
CSNK2B-207ENST00000475875 NCOR1O75376 2440 aa18.21■□□□□ 0.51
CSNK2B-207ENST00000475875 PLXNB2O15031 1838 aa18.21■□□□□ 0.51
CSNK2B-207ENST00000475875 RFX7Q2KHR2 1363 aa18.2■□□□□ 0.5
CSNK2B-207ENST00000475875 TBC1D12O60347 775 aa18.2■□□□□ 0.5
CSNK2B-207ENST00000475875 ALDH1L1O75891 902 aa18.2■□□□□ 0.5
CSNK2B-207ENST00000475875 PDE3AQ14432 1141 aa18.2■□□□□ 0.5
CSNK2B-207ENST00000475875 PUM3Q15397 648 aaKnown RBP18.2■□□□□ 0.5
CSNK2B-207ENST00000475875 SENP6Q9GZR1 1112 aaPredicted RBP18.2■□□□□ 0.5
CSNK2B-207ENST00000475875 LOC285556D6RIA3 1793 aa18.19■□□□□ 0.5
CSNK2B-207ENST00000475875 F6X3S4 739 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms