RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 SEMA6CQ9H3T2 930 aa11.05□□□□□ -0.64
SMC5-203ENST00000475540 RNGTTO60942 597 aaKnown RBP11.04□□□□□ -0.64
SMC5-203ENST00000475540 ERVK-24P63145 666 aa11.04□□□□□ -0.64
SMC5-203ENST00000475540 AGMOQ6ZNB7 445 aa11.04□□□□□ -0.64
SMC5-203ENST00000475540 GIMAP7Q8NHV1 300 aa11.04□□□□□ -0.64
SMC5-203ENST00000475540 DAGLAQ9Y4D2 1042 aa11.04□□□□□ -0.64
SMC5-203ENST00000475540 RBM47A0AV96 593 aaKnown RBP11.03□□□□□ -0.64
SMC5-203ENST00000475540 MRPL58Q14197 206 aaKnown RBP11.03□□□□□ -0.64
SMC5-203ENST00000475540 TTLL4Q14679 1199 aa11.03□□□□□ -0.64
SMC5-203ENST00000475540 ZMYM1Q5SVZ6 1142 aa11.03□□□□□ -0.64
SMC5-203ENST00000475540 SMYD4Q8IYR2 804 aaPredicted RBP11.03□□□□□ -0.64
SMC5-203ENST00000475540 MFSD14AQ96MC6 490 aa11.03□□□□□ -0.64
SMC5-203ENST00000475540 PICK1Q9NRD5 415 aa11.03□□□□□ -0.64
SMC5-203ENST00000475540 DCDC2CA8MYV0 355 aa11.02□□□□□ -0.65
SMC5-203ENST00000475540 RELL1Q8IUW5 271 aa11.02□□□□□ -0.65
SMC5-203ENST00000475540 RNF214Q8ND24 703 aa11.02□□□□□ -0.65
SMC5-203ENST00000475540 ELMO3Q96BJ8 720 aa11.02□□□□□ -0.65
SMC5-203ENST00000475540 SSU72Q9NP77 194 aaKnown RBP11.02□□□□□ -0.65
SMC5-203ENST00000475540 CSADQ9Y600 493 aa11.02□□□□□ -0.65
SMC5-203ENST00000475540 HCLS1P14317 486 aaPredicted RBP11.01□□□□□ -0.65
SMC5-203ENST00000475540 C12orf40Q86WS4 652 aa11.01□□□□□ -0.65
SMC5-203ENST00000475540 FBXL6Q8N531 539 aa11.01□□□□□ -0.65
SMC5-203ENST00000475540 TBC1D32Q96NH3 1257 aa11.01□□□□□ -0.65
SMC5-203ENST00000475540 LGR6Q9HBX8 967 aa11.01□□□□□ -0.65
SMC5-203ENST00000475540 PRKAG2Q9UGJ0 569 aa11.01□□□□□ -0.65
SMC5-203ENST00000475540 PCOLCE2Q9UKZ9 415 aa11.01□□□□□ -0.65
SMC5-203ENST00000475540 RNF112Q9ULX5 631 aa11.01□□□□□ -0.65
SMC5-203ENST00000475540 CCDC9Q9Y3X0 531 aaKnown RBP11.01□□□□□ -0.65
SMC5-203ENST00000475540 PCDHB5Q9Y5E4 795 aa11.01□□□□□ -0.65
SMC5-203ENST00000475540 WDR64B1ANS9 1081 aa11□□□□□ -0.65
SMC5-203ENST00000475540 PTPN11Q06124 597 aaPredicted RBP11□□□□□ -0.65
SMC5-203ENST00000475540 DIEXFQ68CQ4 756 aaKnown RBP11□□□□□ -0.65
SMC5-203ENST00000475540 HDXQ7Z353 690 aa11□□□□□ -0.65
SMC5-203ENST00000475540 SHKBP1Q8TBC3 707 aa11□□□□□ -0.65
SMC5-203ENST00000475540 MIR1-1HGQ9H1L0 117 aa11□□□□□ -0.65
SMC5-203ENST00000475540 ATG3Q9NT62 314 aa11□□□□□ -0.65
SMC5-203ENST00000475540 PWP1Q13610 501 aa10.99□□□□□ -0.65
SMC5-203ENST00000475540 PPM1JQ5JR12 505 aa10.99□□□□□ -0.65
SMC5-203ENST00000475540 RSRP1Q9BUV0 290 aa10.99□□□□□ -0.65
SMC5-203ENST00000475540 TLR6Q9Y2C9 796 aa10.99□□□□□ -0.65
SMC5-203ENST00000475540 TFE3P19532 575 aaPredicted RBP10.98□□□□□ -0.65
SMC5-203ENST00000475540 SEPT6Q14141 434 aa10.98□□□□□ -0.65
SMC5-203ENST00000475540 ZAR1Q86SH2 424 aa10.98□□□□□ -0.65
SMC5-203ENST00000475540 ZDHHC13Q8IUH4 622 aa10.98□□□□□ -0.65
SMC5-203ENST00000475540 GAL3ST3Q96A11 431 aa10.98□□□□□ -0.65
SMC5-203ENST00000475540 SNCAIPQ9Y6H5 919 aa10.98□□□□□ -0.65
SMC5-203ENST00000475540 FANCGO15287 622 aa10.97□□□□□ -0.65
SMC5-203ENST00000475540 GBP2P32456 591 aaPredicted RBP10.97□□□□□ -0.65
SMC5-203ENST00000475540 INPP5AQ14642 412 aa10.97□□□□□ -0.65
SMC5-203ENST00000475540 SEZ6L2Q6UXD5 910 aa10.97□□□□□ -0.65
SMC5-203ENST00000475540 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.97□□□□□ -0.65
SMC5-203ENST00000475540 TMEM87AQ8NBN3 555 aa10.97□□□□□ -0.65
SMC5-203ENST00000475540 PHC3Q8NDX5 983 aa10.97□□□□□ -0.65
SMC5-203ENST00000475540 OSBPL1AQ9BXW6 950 aa10.97□□□□□ -0.65
SMC5-203ENST00000475540 DYNC1LI2O43237 492 aaPredicted RBP10.96□□□□□ -0.65
SMC5-203ENST00000475540 F13BP05160 661 aa10.96□□□□□ -0.65
SMC5-203ENST00000475540 NEFMP07197 916 aa10.96□□□□□ -0.65
SMC5-203ENST00000475540 ADMP35318 185 aa10.96□□□□□ -0.65
SMC5-203ENST00000475540 RING1Q06587 406 aa10.96□□□□□ -0.65
SMC5-203ENST00000475540 LRFN4Q6PJG9 635 aa10.96□□□□□ -0.65
SMC5-203ENST00000475540 CDC37L1Q7L3B6 337 aa10.96□□□□□ -0.65
SMC5-203ENST00000475540 RGS22Q8NE09 1264 aa10.96□□□□□ -0.65
SMC5-203ENST00000475540 JARID2Q92833 1246 aaPredicted RBP10.96□□□□□ -0.65
SMC5-203ENST00000475540 ISL2Q96A47 359 aa10.96□□□□□ -0.65
SMC5-203ENST00000475540 PLPPR2Q96GM1 343 aa10.96□□□□□ -0.65
SMC5-203ENST00000475540 C1GALT1Q9NS00 363 aa10.96□□□□□ -0.65
SMC5-203ENST00000475540 F6X3S4 739 aa10.95□□□□□ -0.66
SMC5-203ENST00000475540 TSNAXIP1Q2TAA8 658 aa10.95□□□□□ -0.66
SMC5-203ENST00000475540 XP32Q5T750 250 aa10.95□□□□□ -0.66
SMC5-203ENST00000475540 DUSP27Q5VZP5 1158 aa10.95□□□□□ -0.66
SMC5-203ENST00000475540 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.95□□□□□ -0.66
SMC5-203ENST00000475540 TMEM74Q96NL1 305 aa10.95□□□□□ -0.66
SMC5-203ENST00000475540 METTL22Q9BUU2 404 aaPredicted RBP10.95□□□□□ -0.66
SMC5-203ENST00000475540 SCO2A0A1W2PP80 73 aa10.94□□□□□ -0.66
SMC5-203ENST00000475540 TGFB1P01137 390 aa10.94□□□□□ -0.66
SMC5-203ENST00000475540 CYP27A1Q02318 531 aa10.94□□□□□ -0.66
SMC5-203ENST00000475540 LMNB2Q03252 620 aa10.94□□□□□ -0.66
SMC5-203ENST00000475540 CAMK2GQ13555 558 aaPredicted RBP10.94□□□□□ -0.66
SMC5-203ENST00000475540 CYFIP1Q7L576 1253 aa10.94□□□□□ -0.66
SMC5-203ENST00000475540 CCDC84Q86UT8 332 aaPredicted RBP10.94□□□□□ -0.66
SMC5-203ENST00000475540 KCT2Q8NC54 265 aa10.94□□□□□ -0.66
SMC5-203ENST00000475540 LEMD3Q9Y2U8 911 aa10.94□□□□□ -0.66
SMC5-203ENST00000475540 PRAMEF27A3QJZ7 478 aa10.93□□□□□ -0.66
SMC5-203ENST00000475540 PRR19A6NJB7 356 aa10.93□□□□□ -0.66
SMC5-203ENST00000475540 MINDY4BA8MYZ0 360 aa10.93□□□□□ -0.66
SMC5-203ENST00000475540 GRIK1P39086 918 aa10.93□□□□□ -0.66
SMC5-203ENST00000475540 CPSF6Q16630 551 aaKnown RBP eCLIP10.93□□□□□ -0.66
SMC5-203ENST00000475540 WIPI1Q5MNZ9 446 aaPredicted RBP10.93□□□□□ -0.66
SMC5-203ENST00000475540 ZBTB37Q5TC79 503 aa10.93□□□□□ -0.66
SMC5-203ENST00000475540 SHISA5Q8N114 240 aa10.93□□□□□ -0.66
SMC5-203ENST00000475540 ZNF507Q8TCN5 953 aa10.93□□□□□ -0.66
SMC5-203ENST00000475540 GATA6Q92908 595 aa10.93□□□□□ -0.66
SMC5-203ENST00000475540 BACH2Q9BYV9 841 aa10.93□□□□□ -0.66
SMC5-203ENST00000475540 COBLO75128 1261 aa10.92□□□□□ -0.66
SMC5-203ENST00000475540 PF4P02776 101 aa10.92□□□□□ -0.66
SMC5-203ENST00000475540 OGFOD3Q6PK18 319 aa10.92□□□□□ -0.66
SMC5-203ENST00000475540 HS2ST1Q7LGA3 356 aa10.92□□□□□ -0.66
SMC5-203ENST00000475540 PIM2Q9P1W9 311 aa10.92□□□□□ -0.66
SMC5-203ENST00000475540 GGT7Q9UJ14 662 aa10.92□□□□□ -0.66
SMC5-203ENST00000475540 FAM170BA6NMN3 283 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms